RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 GAKO14976 1311 aa27.08■■□□□ 1.93
SYNGR3-202ENST00000562045 SEC24BO95487 1268 aa27.08■■□□□ 1.93
SYNGR3-202ENST00000562045 CHGBP05060 677 aa27.08■■□□□ 1.93
SYNGR3-202ENST00000562045 CACNB3P54284 484 aa27.08■■□□□ 1.93
SYNGR3-202ENST00000562045 C1QTNF8P60827 252 aa27.08■■□□□ 1.93
SYNGR3-202ENST00000562045 FSTL1Q12841 308 aa27.08■■□□□ 1.93
SYNGR3-202ENST00000562045 DCPSQ96C86 337 aaKnown RBP27.08■■□□□ 1.93
SYNGR3-202ENST00000562045 UPF2Q9HAU5 1272 aaKnown RBP27.08■■□□□ 1.93
SYNGR3-202ENST00000562045 MYH7P12883 1935 aa27.08■■□□□ 1.93
SYNGR3-202ENST00000562045 CHMLP26374 656 aa27.07■■□□□ 1.92
SYNGR3-202ENST00000562045 SLFNL1Q499Z3 407 aa27.07■■□□□ 1.92
SYNGR3-202ENST00000562045 ZNF70Q9UC06 446 aaPredicted RBP27.07■■□□□ 1.92
SYNGR3-202ENST00000562045 MROH7-TTC4A0A0A0MT08 1334 aa27.07■■□□□ 1.92
SYNGR3-202ENST00000562045 SPDYE2Q495Y8 402 aa27.07■■□□□ 1.92
SYNGR3-202ENST00000562045 KRT26Q7Z3Y9 468 aa27.07■■□□□ 1.92
SYNGR3-202ENST00000562045 PASKQ96RG2 1323 aa27.06■■□□□ 1.92
SYNGR3-202ENST00000562045 HIP1O00291 1037 aa27.06■■□□□ 1.92
SYNGR3-202ENST00000562045 FAM163AQ96GL9 167 aaPredicted RBP27.06■■□□□ 1.92
SYNGR3-202ENST00000562045 FSD1Q9BTV5 496 aa27.06■■□□□ 1.92
SYNGR3-202ENST00000562045 PITPNM2Q9BZ72 1349 aa27.06■■□□□ 1.92
SYNGR3-202ENST00000562045 PRAMEF18Q5VWM3 479 aa27.05■■□□□ 1.92
SYNGR3-202ENST00000562045 NAA16Q6N069 864 aaPredicted RBP27.05■■□□□ 1.92
SYNGR3-202ENST00000562045 CDC42EP5Q6NZY7 148 aa27.05■■□□□ 1.92
SYNGR3-202ENST00000562045 CDC37L1Q7L3B6 337 aa27.05■■□□□ 1.92
SYNGR3-202ENST00000562045 MAGEB6Q8N7X4 407 aa27.05■■□□□ 1.92
SYNGR3-202ENST00000562045 VEZTQ9HBM0 779 aa27.05■■□□□ 1.92
SYNGR3-202ENST00000562045 RFX7Q2KHR2 1363 aa27.04■■□□□ 1.92
SYNGR3-202ENST00000562045 BTDP43251 543 aa27.04■■□□□ 1.92
SYNGR3-202ENST00000562045 MFAP1P55081 439 aaKnown RBP27.04■■□□□ 1.92
SYNGR3-202ENST00000562045 TTF1Q15361 905 aaPredicted RBP27.04■■□□□ 1.92
SYNGR3-202ENST00000562045 TICAM2Q86XR7 235 aa27.04■■□□□ 1.92
SYNGR3-202ENST00000562045 KBTBD3Q8NAB2 608 aa27.04■■□□□ 1.92
SYNGR3-202ENST00000562045 DIAPH3Q9NSV4 1193 aa27.04■■□□□ 1.92
SYNGR3-202ENST00000562045 TRPM7Q96QT4 1865 aa27.03■■□□□ 1.92
SYNGR3-202ENST00000562045 GPR75-ASB3A0A0A6YYF3 556 aa27.03■■□□□ 1.92
SYNGR3-202ENST00000562045 MYO1BO43795 1136 aa27.03■■□□□ 1.92
SYNGR3-202ENST00000562045 CDK5RAP2Q96SN8 1893 aa27.03■■□□□ 1.92
SYNGR3-202ENST00000562045 AK9Q5TCS8 1911 aa27.02■■□□□ 1.92
SYNGR3-202ENST00000562045 MAP3K12Q12852 859 aa27.02■■□□□ 1.92
SYNGR3-202ENST00000562045 SULF1Q8IWU6 871 aa27.02■■□□□ 1.92
SYNGR3-202ENST00000562045 RBM19Q9Y4C8 960 aaKnown RBP27.02■■□□□ 1.92
SYNGR3-202ENST00000562045 TCP10L2B9ZVM9 353 aa27.02■■□□□ 1.92
SYNGR3-202ENST00000562045 PDE6AP16499 860 aa27.02■■□□□ 1.92
SYNGR3-202ENST00000562045 CYP7A1P22680 504 aa27.02■■□□□ 1.92
SYNGR3-202ENST00000562045 GSTO1P78417 241 aa27.02■■□□□ 1.92
SYNGR3-202ENST00000562045 SLC9C2Q5TAH2 1124 aa27.02■■□□□ 1.92
SYNGR3-202ENST00000562045 ESYT1Q9BSJ8 1104 aa27.02■■□□□ 1.92
SYNGR3-202ENST00000562045 USP40Q9NVE5 1235 aa27.02■■□□□ 1.92
SYNGR3-202ENST00000562045 TCRBV5S4A2TA0A5A2 114 aa27.01■■□□□ 1.91
SYNGR3-202ENST00000562045 RHBDL3P58872 404 aa27.01■■□□□ 1.91
SYNGR3-202ENST00000562045 NFIAQ12857 509 aa27.01■■□□□ 1.91
SYNGR3-202ENST00000562045 CDAN1Q8IWY9 1227 aa27.01■■□□□ 1.91
SYNGR3-202ENST00000562045 SLF2Q8IX21 1173 aa27.01■■□□□ 1.91
SYNGR3-202ENST00000562045 CNTNAP1P78357 1384 aa27■■□□□ 1.91
SYNGR3-202ENST00000562045 APOBEC3FQ8IUX4 373 aaKnown RBP27■■□□□ 1.91
SYNGR3-202ENST00000562045 RUFY2Q8WXA3 655 aa27■■□□□ 1.91
SYNGR3-202ENST00000562045 DEFB129Q9H1M3 183 aa27■■□□□ 1.91
SYNGR3-202ENST00000562045 AATFQ9NY61 560 aaKnown RBP eCLIP27■■□□□ 1.91
SYNGR3-202ENST00000562045 REC8O95072 547 aa26.99■■□□□ 1.91
SYNGR3-202ENST00000562045 LDHCP07864 332 aa26.99■■□□□ 1.91
SYNGR3-202ENST00000562045 DYNLL1P63167 89 aaKnown RBP26.99■■□□□ 1.91
SYNGR3-202ENST00000562045 LRRFIP1Q32MZ4 808 aaKnown RBP26.99■■□□□ 1.91
SYNGR3-202ENST00000562045 MIGA1Q8NAN2 632 aa26.99■■□□□ 1.91
SYNGR3-202ENST00000562045 CDCA5Q96FF9 252 aa26.99■■□□□ 1.91
SYNGR3-202ENST00000562045 ZNF532Q9HCE3 1301 aa26.99■■□□□ 1.91
SYNGR3-202ENST00000562045 CST9Q5W186 159 aa26.99■■□□□ 1.91
SYNGR3-202ENST00000562045 ADD2P35612 726 aa26.98■■□□□ 1.91
SYNGR3-202ENST00000562045 RASA3Q14644 834 aa26.98■■□□□ 1.91
SYNGR3-202ENST00000562045 CWC27Q6UX04 472 aaKnown RBP26.98■■□□□ 1.91
SYNGR3-202ENST00000562045 SH3RF3Q8TEJ3 882 aaPredicted RBP26.98■■□□□ 1.91
SYNGR3-202ENST00000562045 ZNF408Q9H9D4 720 aa26.98■■□□□ 1.91
SYNGR3-202ENST00000562045 HTRA3P83110 453 aa26.97■■□□□ 1.91
SYNGR3-202ENST00000562045 TMEM39BQ9GZU3 492 aa26.97■■□□□ 1.91
SYNGR3-202ENST00000562045 FAM198AQ9UFP1 575 aa26.97■■□□□ 1.91
SYNGR3-202ENST00000562045 FOCADQ5VW36 1801 aa26.97■■□□□ 1.91
SYNGR3-202ENST00000562045 WDHD1O75717 1129 aaPredicted RBP26.96■■□□□ 1.91
SYNGR3-202ENST00000562045 ZFPM1Q8IX07 1006 aa26.96■■□□□ 1.91
SYNGR3-202ENST00000562045 DDX4Q9NQI0 724 aaKnown RBP26.96■■□□□ 1.91
SYNGR3-202ENST00000562045 SGSM2O43147 1006 aa26.96■■□□□ 1.91
SYNGR3-202ENST00000562045 SSC5DA1L4H1 1573 aa26.95■■□□□ 1.9
SYNGR3-202ENST00000562045 RAD50Q92878 1312 aa26.95■■□□□ 1.9
SYNGR3-202ENST00000562045 IGSF3O75054 1194 aa26.95■■□□□ 1.9
SYNGR3-202ENST00000562045 TEPSINQ96N21 525 aa26.95■■□□□ 1.9
SYNGR3-202ENST00000562045 CELF2O95319 508 aaKnown RBP26.94■■□□□ 1.9
SYNGR3-202ENST00000562045 PPP4CP60510 307 aa26.94■■□□□ 1.9
SYNGR3-202ENST00000562045 TCP10Q12799 353 aa26.94■■□□□ 1.9
SYNGR3-202ENST00000562045 NMIQ13287 307 aaPredicted RBP26.94■■□□□ 1.9
SYNGR3-202ENST00000562045 RIOK1Q9BRS2 568 aaKnown RBP26.94■■□□□ 1.9
SYNGR3-202ENST00000562045 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.94■■□□□ 1.9
SYNGR3-202ENST00000562045 TMOD2Q9NZR1 351 aa26.94■■□□□ 1.9
SYNGR3-202ENST00000562045 FZD1Q9UP38 647 aa26.94■■□□□ 1.9
SYNGR3-202ENST00000562045 ZFYP08048 801 aaPredicted RBP26.93■■□□□ 1.9
SYNGR3-202ENST00000562045 APLP1P51693 650 aa26.93■■□□□ 1.9
SYNGR3-202ENST00000562045 NBPF12Q5TAG4 269 aaPredicted RBP26.93■■□□□ 1.9
SYNGR3-202ENST00000562045 CEP350Q5VT06 3117 aa26.93■■□□□ 1.9
SYNGR3-202ENST00000562045 PICALMQ13492 652 aa26.93■■□□□ 1.9
SYNGR3-202ENST00000562045 ZSCAN25Q6NSZ9 544 aa26.93■■□□□ 1.9
SYNGR3-202ENST00000562045 FAM227BQ96M60 508 aa26.93■■□□□ 1.9
SYNGR3-202ENST00000562045 TBC1D32Q96NH3 1257 aa26.93■■□□□ 1.9
SYNGR3-202ENST00000562045 IDI2Q9BXS1 227 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms