RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 MAP3K9P80192 1104 aa13.39□□□□□ -0.27
TPM1-227ENST00000560970 FAM83AQ86UY5 434 aa13.39□□□□□ -0.27
TPM1-227ENST00000560970 GCC1Q96CN9 775 aa13.39□□□□□ -0.27
TPM1-227ENST00000560970 HOOK2Q96ED9 719 aa13.39□□□□□ -0.27
TPM1-227ENST00000560970 YTHDC1Q96MU7 727 aaKnown RBP13.39□□□□□ -0.27
TPM1-227ENST00000560970 WRNIP1Q96S55 665 aa13.39□□□□□ -0.27
TPM1-227ENST00000560970 ZCCHC17Q9NP64 241 aaKnown RBP13.39□□□□□ -0.27
TPM1-227ENST00000560970 SUGT1Q9Y2Z0 365 aa13.39□□□□□ -0.27
TPM1-227ENST00000560970 SNCAIPQ9Y6H5 919 aa13.39□□□□□ -0.27
TPM1-227ENST00000560970 IFIT1P09914 478 aaKnown RBP13.38□□□□□ -0.27
TPM1-227ENST00000560970 CAP1Q01518 475 aa13.38□□□□□ -0.27
TPM1-227ENST00000560970 FKBP1CQ5VVH2 108 aa13.38□□□□□ -0.27
TPM1-227ENST00000560970 CLUAP1Q96AJ1 413 aa13.38□□□□□ -0.27
TPM1-227ENST00000560970 MEIS3Q99687 375 aa13.38□□□□□ -0.27
TPM1-227ENST00000560970 ZFYVE28Q9HCC9 887 aa13.38□□□□□ -0.27
TPM1-227ENST00000560970 WDHD1O75717 1129 aaPredicted RBP13.37□□□□□ -0.27
TPM1-227ENST00000560970 FGFR2P21802 821 aa13.37□□□□□ -0.27
TPM1-227ENST00000560970 ARHGEF6Q15052 776 aa13.37□□□□□ -0.27
TPM1-227ENST00000560970 ZKSCAN2Q63HK3 967 aa13.37□□□□□ -0.27
TPM1-227ENST00000560970 DCAF15Q66K64 600 aa13.37□□□□□ -0.27
TPM1-227ENST00000560970 ERO1BQ86YB8 467 aa13.37□□□□□ -0.27
TPM1-227ENST00000560970 FAM43AQ8N2R8 423 aa13.37□□□□□ -0.27
TPM1-227ENST00000560970 KLHDC4Q8TBB5 520 aa13.37□□□□□ -0.27
TPM1-227ENST00000560970 ZNF333Q96JL9 665 aa13.37□□□□□ -0.27
TPM1-227ENST00000560970 IPO8O15397 1037 aaKnown RBP13.36□□□□□ -0.27
TPM1-227ENST00000560970 CETPP11597 493 aa13.36□□□□□ -0.27
TPM1-227ENST00000560970 RLBP1P12271 317 aa13.36□□□□□ -0.27
TPM1-227ENST00000560970 SLC5A1P13866 664 aa13.36□□□□□ -0.27
TPM1-227ENST00000560970 BCAMP50895 628 aa13.36□□□□□ -0.27
TPM1-227ENST00000560970 PPIL2Q13356 520 aa13.36□□□□□ -0.27
TPM1-227ENST00000560970 SLC9C1Q4G0N8 1177 aa13.36□□□□□ -0.27
TPM1-227ENST00000560970 TMEM57Q8N5G2 664 aa13.36□□□□□ -0.27
TPM1-227ENST00000560970 EYA2O00167 538 aa13.35□□□□□ -0.27
TPM1-227ENST00000560970 SNAPC2Q13487 334 aa13.35□□□□□ -0.27
TPM1-227ENST00000560970 APOBEC3HQ6NTF7 200 aaKnown RBP13.35□□□□□ -0.27
TPM1-227ENST00000560970 HHIPL2Q6UWX4 724 aa13.35□□□□□ -0.27
TPM1-227ENST00000560970 MRIQ9BWK5 157 aa13.35□□□□□ -0.27
TPM1-227ENST00000560970 PTCH2Q9Y6C5 1203 aa13.35□□□□□ -0.27
TPM1-227ENST00000560970 SIPA1L1O43166 1804 aa13.34□□□□□ -0.27
TPM1-227ENST00000560970 RFX7Q2KHR2 1363 aa13.34□□□□□ -0.27
TPM1-227ENST00000560970 IRF6O14896 467 aa13.34□□□□□ -0.27
TPM1-227ENST00000560970 TLR2O60603 784 aa13.34□□□□□ -0.27
TPM1-227ENST00000560970 CENPBP07199 599 aaPredicted RBP13.34□□□□□ -0.27
TPM1-227ENST00000560970 UBTFL1P0CB47 393 aaPredicted RBP13.34□□□□□ -0.27
TPM1-227ENST00000560970 RFX5P48382 616 aaPredicted RBP13.34□□□□□ -0.27
TPM1-227ENST00000560970 WDR66Q8TBY9 1149 aa13.34□□□□□ -0.27
TPM1-227ENST00000560970 LPIN2Q92539 896 aa13.34□□□□□ -0.27
TPM1-227ENST00000560970 ZNF341Q9BYN7 854 aa13.34□□□□□ -0.27
TPM1-227ENST00000560970 RCAN3Q9UKA8 241 aa13.34□□□□□ -0.27
TPM1-227ENST00000560970 LRRFIP2Q9Y608 721 aaKnown RBP13.34□□□□□ -0.27
TPM1-227ENST00000560970 BTBD19C9JJ37 291 aa13.33□□□□□ -0.28
TPM1-227ENST00000560970 LACTBP83111 547 aaPredicted RBP13.33□□□□□ -0.28
TPM1-227ENST00000560970 KIF22Q14807 665 aa13.33□□□□□ -0.28
TPM1-227ENST00000560970 NBPF11Q86T75 865 aa13.33□□□□□ -0.28
TPM1-227ENST00000560970 ZKSCAN4Q969J2 545 aaPredicted RBP13.33□□□□□ -0.28
TPM1-227ENST00000560970 TMEM106CQ9BVX2 250 aa13.33□□□□□ -0.28
TPM1-227ENST00000560970 DAGLAQ9Y4D2 1042 aa13.33□□□□□ -0.28
TPM1-227ENST00000560970 MYO5AQ9Y4I1 1855 aaKnown RBP13.33□□□□□ -0.28
TPM1-227ENST00000560970 CIAO1O76071 339 aa13.32□□□□□ -0.28
TPM1-227ENST00000560970 GNRH1P01148 92 aa13.32□□□□□ -0.28
TPM1-227ENST00000560970 EN2P19622 333 aaPredicted RBP13.32□□□□□ -0.28
TPM1-227ENST00000560970 PPATQ06203 517 aa13.32□□□□□ -0.28
TPM1-227ENST00000560970 FAM151AQ8WW52 585 aa13.32□□□□□ -0.28
TPM1-227ENST00000560970 FBXO3Q9UK99 471 aa13.32□□□□□ -0.28
TPM1-227ENST00000560970 ALPK3Q96L96 1907 aa13.32□□□□□ -0.28
TPM1-227ENST00000560970 ADGRA2Q96PE1 1338 aa13.32□□□□□ -0.28
TPM1-227ENST00000560970 SALL1Q9NSC2 1324 aa13.32□□□□□ -0.28
TPM1-227ENST00000560970 ATRNL1Q5VV63 1379 aa13.32□□□□□ -0.28
TPM1-227ENST00000560970 PRDX5P30044 214 aa13.31□□□□□ -0.28
TPM1-227ENST00000560970 INPP5BP32019 993 aa13.31□□□□□ -0.28
TPM1-227ENST00000560970 PRMT2P55345 433 aa13.31□□□□□ -0.28
TPM1-227ENST00000560970 DIXDC1Q155Q3 683 aa13.31□□□□□ -0.28
TPM1-227ENST00000560970 ATP2B3Q16720 1220 aa13.31□□□□□ -0.28
TPM1-227ENST00000560970 NOL9Q5SY16 702 aaKnown RBP13.31□□□□□ -0.28
TPM1-227ENST00000560970 ATG9AQ7Z3C6 839 aa13.31□□□□□ -0.28
TPM1-227ENST00000560970 FTSJ3Q8IY81 847 aaKnown RBP13.31□□□□□ -0.28
TPM1-227ENST00000560970 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.31□□□□□ -0.28
TPM1-227ENST00000560970 PANK1Q8TE04 598 aa13.31□□□□□ -0.28
TPM1-227ENST00000560970 ARHGAP39Q9C0H5 1083 aa13.31□□□□□ -0.28
TPM1-227ENST00000560970 CEP290O15078 2479 aa13.31□□□□□ -0.28
TPM1-227ENST00000560970 SEMA3EO15041 775 aa13.3□□□□□ -0.28
TPM1-227ENST00000560970 NPM3O75607 178 aaKnown RBP13.3□□□□□ -0.28
TPM1-227ENST00000560970 LDHBP07195 334 aaKnown RBP13.3□□□□□ -0.28
TPM1-227ENST00000560970 GNAI3P08754 354 aa13.3□□□□□ -0.28
TPM1-227ENST00000560970 SLC4A8Q2Y0W8 1093 aa13.3□□□□□ -0.28
TPM1-227ENST00000560970 CDC42EP5Q6NZY7 148 aa13.3□□□□□ -0.28
TPM1-227ENST00000560970 MIGA2Q7L4E1 593 aa13.3□□□□□ -0.28
TPM1-227ENST00000560970 ANKRD23Q86SG2 305 aa13.3□□□□□ -0.28
TPM1-227ENST00000560970 ITPRIPQ8IWB1 547 aa13.3□□□□□ -0.28
TPM1-227ENST00000560970 SIL1Q9H173 461 aa13.3□□□□□ -0.28
TPM1-227ENST00000560970 GNL3LQ9NVN8 582 aaKnown RBP13.3□□□□□ -0.28
TPM1-227ENST00000560970 KCNH4Q9UQ05 1017 aa13.3□□□□□ -0.28
TPM1-227ENST00000560970 FRMPD3Q5JV73 1810 aa13.29□□□□□ -0.28
TPM1-227ENST00000560970 TCP10Q12799 353 aa13.29□□□□□ -0.28
TPM1-227ENST00000560970 NFIAQ12857 509 aa13.29□□□□□ -0.28
TPM1-227ENST00000560970 HABP4Q5JVS0 413 aaKnown RBP13.29□□□□□ -0.28
TPM1-227ENST00000560970 ZGPATQ8N5A5 531 aaKnown RBP13.29□□□□□ -0.28
TPM1-227ENST00000560970 SH3TC2Q8TF17 1288 aa13.29□□□□□ -0.28
TPM1-227ENST00000560970 PARK7Q99497 189 aaKnown RBP13.29□□□□□ -0.28
TPM1-227ENST00000560970 ZNF112Q9UJU3 913 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms