RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 PHKA1P46020 1223 aa15.19■□□□□ 0.02
SPG11-219ENST00000559822 SOX10P56693 466 aa15.19■□□□□ 0.02
SPG11-219ENST00000559822 MVPQ14764 893 aaKnown RBP15.19■□□□□ 0.02
SPG11-219ENST00000559822 CCL15Q16663 113 aa15.19■□□□□ 0.02
SPG11-219ENST00000559822 CCDC102BQ68D86 513 aa15.19■□□□□ 0.02
SPG11-219ENST00000559822 ERO1BQ86YB8 467 aa15.19■□□□□ 0.02
SPG11-219ENST00000559822 SLF2Q8IX21 1173 aa15.19■□□□□ 0.02
SPG11-219ENST00000559822 FAM151AQ8WW52 585 aa15.19■□□□□ 0.02
SPG11-219ENST00000559822 OTUD5Q96G74 571 aa15.19■□□□□ 0.02
SPG11-219ENST00000559822 MS4A4AQ96JQ5 239 aa15.19■□□□□ 0.02
SPG11-219ENST00000559822 ZNF341Q9BYN7 854 aa15.19■□□□□ 0.02
SPG11-219ENST00000559822 ARHGEF6Q15052 776 aa15.18■□□□□ 0.02
SPG11-219ENST00000559822 DIXDC1Q155Q3 683 aa15.18■□□□□ 0.02
SPG11-219ENST00000559822 SPTY2D1Q68D10 685 aaPredicted RBP15.18■□□□□ 0.02
SPG11-219ENST00000559822 ZFYVE28Q9HCC9 887 aa15.18■□□□□ 0.02
SPG11-219ENST00000559822 TRIM17Q9Y577 477 aa15.18■□□□□ 0.02
SPG11-219ENST00000559822 A0A1B0GUL7 405 aa15.17■□□□□ 0.02
SPG11-219ENST00000559822 CETPP11597 493 aa15.17■□□□□ 0.02
SPG11-219ENST00000559822 ZKSCAN2Q63HK3 967 aa15.17■□□□□ 0.02
SPG11-219ENST00000559822 CDC42EP5Q6NZY7 148 aa15.17■□□□□ 0.02
SPG11-219ENST00000559822 DZIP1Q86YF9 867 aaKnown RBP15.17■□□□□ 0.02
SPG11-219ENST00000559822 BRI3BPQ8WY22 251 aa15.17■□□□□ 0.02
SPG11-219ENST00000559822 PTPN18Q99952 460 aa15.17■□□□□ 0.02
SPG11-219ENST00000559822 ZCCHC17Q9NP64 241 aaKnown RBP15.17■□□□□ 0.02
SPG11-219ENST00000559822 USP40Q9NVE5 1235 aa15.17■□□□□ 0.02
SPG11-219ENST00000559822 SNCAIPQ9Y6H5 919 aa15.17■□□□□ 0.02
SPG11-219ENST00000559822 BCAR3O75815 825 aa15.16■□□□□ 0.02
SPG11-219ENST00000559822 ADORA1P30542 326 aa15.16■□□□□ 0.02
SPG11-219ENST00000559822 TIMM10P62072 90 aa15.16■□□□□ 0.02
SPG11-219ENST00000559822 HNRNPUQ00839 825 aaKnown RBP eCLIP15.16■□□□□ 0.02
SPG11-219ENST00000559822 SP3Q02447 781 aa15.16■□□□□ 0.02
SPG11-219ENST00000559822 TCP10Q12799 353 aa15.16■□□□□ 0.02
SPG11-219ENST00000559822 TFCP2Q12800 502 aa15.16■□□□□ 0.02
SPG11-219ENST00000559822 PPIL2Q13356 520 aa15.16■□□□□ 0.02
SPG11-219ENST00000559822 SNAPC2Q13487 334 aa15.16■□□□□ 0.02
SPG11-219ENST00000559822 TAF1CQ15572 869 aaPredicted RBP15.16■□□□□ 0.02
SPG11-219ENST00000559822 OTOP1Q7RTM1 612 aa15.16■□□□□ 0.02
SPG11-219ENST00000559822 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
SPG11-219ENST00000559822 XAGE2Q96GT9 111 aa15.16■□□□□ 0.02
SPG11-219ENST00000559822 G3BP1Q13283 466 aaKnown RBP eCLIP15.15■□□□□ 0.02
SPG11-219ENST00000559822 RASGRF1Q13972 1273 aa15.15■□□□□ 0.02
SPG11-219ENST00000559822 GORABQ5T7V8 394 aa15.15■□□□□ 0.02
SPG11-219ENST00000559822 MIGA2Q7L4E1 593 aa15.15■□□□□ 0.02
SPG11-219ENST00000559822 ZKSCAN4Q969J2 545 aaPredicted RBP15.15■□□□□ 0.02
SPG11-219ENST00000559822 CLUAP1Q96AJ1 413 aa15.15■□□□□ 0.02
SPG11-219ENST00000559822 NEUROD6Q96NK8 337 aa15.15■□□□□ 0.02
SPG11-219ENST00000559822 EFCC1Q9HA90 598 aa15.15■□□□□ 0.02
SPG11-219ENST00000559822 ABCF2Q9UG63 623 aa15.15■□□□□ 0.02
SPG11-219ENST00000559822 GAKO14976 1311 aa15.15■□□□□ 0.02
SPG11-219ENST00000559822 AK9Q5TCS8 1911 aa15.14■□□□□ 0.01
SPG11-219ENST00000559822 ENTPD3O75355 529 aa15.14■□□□□ 0.01
SPG11-219ENST00000559822 PPATQ06203 517 aa15.14■□□□□ 0.01
SPG11-219ENST00000559822 NFIAQ12857 509 aa15.14■□□□□ 0.01
SPG11-219ENST00000559822 CD99L2Q8TCZ2 262 aa15.14■□□□□ 0.01
SPG11-219ENST00000559822 MYH2Q9UKX2 1941 aa15.13■□□□□ 0.01
SPG11-219ENST00000559822 IRF6O14896 467 aa15.13■□□□□ 0.01
SPG11-219ENST00000559822 ERICH6Q7L0X2 663 aa15.13■□□□□ 0.01
SPG11-219ENST00000559822 FTSJ3Q8IY81 847 aaKnown RBP15.13■□□□□ 0.01
SPG11-219ENST00000559822 FAM43AQ8N2R8 423 aa15.13■□□□□ 0.01
SPG11-219ENST00000559822 FAM163AQ96GL9 167 aaPredicted RBP15.13■□□□□ 0.01
SPG11-219ENST00000559822 IDI2Q9BXS1 227 aa15.13■□□□□ 0.01
SPG11-219ENST00000559822 FAM198AQ9UFP1 575 aa15.13■□□□□ 0.01
SPG11-219ENST00000559822 ZNF112Q9UJU3 913 aa15.13■□□□□ 0.01
SPG11-219ENST00000559822 PTPN22Q9Y2R2 807 aa15.13■□□□□ 0.01
SPG11-219ENST00000559822 INPP5BP32019 993 aa15.12■□□□□ 0.01
SPG11-219ENST00000559822 RGS3P49796 1198 aa15.12■□□□□ 0.01
SPG11-219ENST00000559822 GSTO1P78417 241 aa15.12■□□□□ 0.01
SPG11-219ENST00000559822 KIF22Q14807 665 aa15.12■□□□□ 0.01
SPG11-219ENST00000559822 NOL9Q5SY16 702 aaKnown RBP15.12■□□□□ 0.01
SPG11-219ENST00000559822 DIEXFQ68CQ4 756 aaKnown RBP15.12■□□□□ 0.01
SPG11-219ENST00000559822 TMEM57Q8N5G2 664 aa15.12■□□□□ 0.01
SPG11-219ENST00000559822 MROH7-TTC4A0A0A0MT08 1334 aa15.12■□□□□ 0.01
SPG11-219ENST00000559822 DOCK2Q92608 1830 aa15.11■□□□□ 0.01
SPG11-219ENST00000559822 PNMA6EA0A0J9YXQ4 647 aa15.11■□□□□ 0.01
SPG11-219ENST00000559822 TLR2O60603 784 aa15.11■□□□□ 0.01
SPG11-219ENST00000559822 MAP4K4O95819 1239 aaPredicted RBP15.11■□□□□ 0.01
SPG11-219ENST00000559822 LDHCP07864 332 aa15.11■□□□□ 0.01
SPG11-219ENST00000559822 UQCRFS1P1P0C7P4 283 aa15.11■□□□□ 0.01
SPG11-219ENST00000559822 ZSCAN29Q8IWY8 852 aaPredicted RBP15.11■□□□□ 0.01
SPG11-219ENST00000559822 SPATA5Q8NB90 893 aa15.11■□□□□ 0.01
SPG11-219ENST00000559822 TNNQ9UQP3 1299 aa15.11■□□□□ 0.01
SPG11-219ENST00000559822 BTBD19C9JJ37 291 aa15.1■□□□□ 0.01
SPG11-219ENST00000559822 ARID4AP29374 1257 aaPredicted RBP15.1■□□□□ 0.01
SPG11-219ENST00000559822 BTDP43251 543 aa15.1■□□□□ 0.01
SPG11-219ENST00000559822 MECOMQ03112 1051 aa15.1■□□□□ 0.01
SPG11-219ENST00000559822 OS9Q13438 667 aaPredicted RBP15.1■□□□□ 0.01
SPG11-219ENST00000559822 MIER1Q8N108 512 aa15.1■□□□□ 0.01
SPG11-219ENST00000559822 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.1■□□□□ 0.01
SPG11-219ENST00000559822 GPR108Q9NPR9 543 aa15.1■□□□□ 0.01
SPG11-219ENST00000559822 PICK1Q9NRD5 415 aa15.1■□□□□ 0.01
SPG11-219ENST00000559822 HMG20BQ9P0W2 317 aa15.1■□□□□ 0.01
SPG11-219ENST00000559822 KCNH4Q9UQ05 1017 aa15.1■□□□□ 0.01
SPG11-219ENST00000559822 PDE4DIPQ5VU43 2346 aa15.1■□□□□ 0.01
SPG11-219ENST00000559822 RFX7Q2KHR2 1363 aa15.1■□□□□ 0.01
SPG11-219ENST00000559822 GPR75-ASB3A0A0A6YYF3 556 aa15.09■□□□□ 0.01
SPG11-219ENST00000559822 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
SPG11-219ENST00000559822 GNRH1P01148 92 aa15.09■□□□□ 0.01
SPG11-219ENST00000559822 POLA2Q14181 598 aa15.09■□□□□ 0.01
SPG11-219ENST00000559822 ANKRD23Q86SG2 305 aa15.09■□□□□ 0.01
SPG11-219ENST00000559822 ITPRIPQ8IWB1 547 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms