RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 GSC2O15499 205 aa5.95□□□□□ -1.46
SPG11-206ENST00000558093 AOC2O75106 756 aa5.95□□□□□ -1.46
SPG11-206ENST00000558093 SLFN14P0C7P3 912 aa5.95□□□□□ -1.46
SPG11-206ENST00000558093 ARNTP27540 789 aa5.95□□□□□ -1.46
SPG11-206ENST00000558093 MAP4P27816 1152 aaKnown RBP5.95□□□□□ -1.46
SPG11-206ENST00000558093 MAP1SQ66K74 1059 aaPredicted RBP5.95□□□□□ -1.46
SPG11-206ENST00000558093 CLEC10AQ8IUN9 316 aa5.95□□□□□ -1.46
SPG11-206ENST00000558093 C2CD4AQ8NCU7 369 aaPredicted RBP5.95□□□□□ -1.46
SPG11-206ENST00000558093 WDR18Q9BV38 432 aa5.95□□□□□ -1.46
SPG11-206ENST00000558093 BCL2L13Q9BXK5 485 aa5.95□□□□□ -1.46
SPG11-206ENST00000558093 CCDC86Q9H6F5 360 aaKnown RBP5.95□□□□□ -1.46
SPG11-206ENST00000558093 C7orf69Q9H7B7 122 aa5.95□□□□□ -1.46
SPG11-206ENST00000558093 KRT82Q9NSB4 513 aa5.95□□□□□ -1.46
SPG11-206ENST00000558093 RNF19AQ9NV58 838 aa5.95□□□□□ -1.46
SPG11-206ENST00000558093 ACTL7BQ9Y614 415 aa5.95□□□□□ -1.46
SPG11-206ENST00000558093 HMX2A2RU54 273 aa5.94□□□□□ -1.46
SPG11-206ENST00000558093 ENC1O14682 589 aa5.94□□□□□ -1.46
SPG11-206ENST00000558093 CELA3AP09093 270 aa5.94□□□□□ -1.46
SPG11-206ENST00000558093 LMNB1P20700 586 aa5.94□□□□□ -1.46
SPG11-206ENST00000558093 ZMYM1Q5SVZ6 1142 aa5.94□□□□□ -1.46
SPG11-206ENST00000558093 FBXO33Q7Z6M2 555 aa5.94□□□□□ -1.46
SPG11-206ENST00000558093 TRIM42Q8IWZ5 723 aa5.94□□□□□ -1.46
SPG11-206ENST00000558093 FBLIM1Q8WUP2 373 aa5.94□□□□□ -1.46
SPG11-206ENST00000558093 FAM161BQ96MY7 647 aa5.94□□□□□ -1.46
SPG11-206ENST00000558093 PIDD1Q9HB75 910 aa5.94□□□□□ -1.46
SPG11-206ENST00000558093 VTI1BQ9UEU0 232 aa5.94□□□□□ -1.46
SPG11-206ENST00000558093 FAM95CA0A1B0GW59 222 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 SCO2A0A1W2PP80 73 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 IGLV1-40P01703 118 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 ITGB7P26010 798 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 ASPAP45381 313 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 DAB2P98082 770 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 ID3Q02535 119 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 LRRC14Q15048 493 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 NFKBIBQ15653 356 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 CCDC85BQ15834 202 aaPredicted RBP5.93□□□□□ -1.46
SPG11-206ENST00000558093 LLGL2Q6P1M3 1020 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 PAOXQ6QHF9 649 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 STK35Q8TDR2 534 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 GIPC2Q8TF65 315 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 FAM83CQ9BQN1 747 aa5.93□□□□□ -1.46
SPG11-206ENST00000558093 SORBS3O60504 671 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 PAGE1O75459 146 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 MFAP1P55081 439 aaKnown RBP5.92□□□□□ -1.46
SPG11-206ENST00000558093 NFIAQ12857 509 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 KIF4BQ2VIQ3 1234 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 ZNF326Q5BKZ1 582 aaKnown RBP5.92□□□□□ -1.46
SPG11-206ENST00000558093 PCNX4Q63HM2 1172 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 CDPF1Q6NVV7 123 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 SV2BQ7L1I2 683 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 TMC4Q7Z404 712 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 PDZD3Q86UT5 571 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 GIMAP7Q8NHV1 300 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 ANKRD24Q8TF21 1146 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 WDR89Q96FK6 387 aaPredicted RBP5.92□□□□□ -1.46
SPG11-206ENST00000558093 DBNDD2Q9BQY9 259 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 ATXN3LQ9H3M9 355 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 PICK1Q9NRD5 415 aa5.92□□□□□ -1.46
SPG11-206ENST00000558093 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.91□□□□□ -1.46
SPG11-206ENST00000558093 TMPRSS2O15393 492 aa5.91□□□□□ -1.46
SPG11-206ENST00000558093 ZNF862O60290 1169 aa5.91□□□□□ -1.46
SPG11-206ENST00000558093 TAGLNQ01995 201 aaKnown RBP5.91□□□□□ -1.46
SPG11-206ENST00000558093 MAP7Q14244 749 aa5.91□□□□□ -1.46
SPG11-206ENST00000558093 MEI1Q5TIA1 1274 aa5.91□□□□□ -1.46
SPG11-206ENST00000558093 RNF43Q68DV7 783 aa5.91□□□□□ -1.46
SPG11-206ENST00000558093 GPBAR1Q8TDU6 330 aa5.91□□□□□ -1.46
SPG11-206ENST00000558093 MFSD14AQ96MC6 490 aa5.91□□□□□ -1.46
SPG11-206ENST00000558093 FAM105AQ9NUU6 356 aa5.91□□□□□ -1.46
SPG11-206ENST00000558093 PPP1R9AQ9ULJ8 1098 aa5.91□□□□□ -1.46
SPG11-206ENST00000558093 DAGLAQ9Y4D2 1042 aa5.91□□□□□ -1.46
SPG11-206ENST00000558093 TRIM37O94972 964 aa5.9□□□□□ -1.46
SPG11-206ENST00000558093 NFICP08651 508 aa5.9□□□□□ -1.46
SPG11-206ENST00000558093 ZNF252P-AS1Q0IIN9 211 aa5.9□□□□□ -1.46
SPG11-206ENST00000558093 MAP3K11Q16584 847 aa5.9□□□□□ -1.46
SPG11-206ENST00000558093 TTBK2Q6IQ55 1244 aa5.9□□□□□ -1.46
SPG11-206ENST00000558093 SLC51AQ86UW1 340 aa5.9□□□□□ -1.46
SPG11-206ENST00000558093 FBXL6Q8N531 539 aa5.9□□□□□ -1.46
SPG11-206ENST00000558093 GRIN3AQ8TCU5 1115 aa5.9□□□□□ -1.46
SPG11-206ENST00000558093 CRELD1Q96HD1 420 aa5.9□□□□□ -1.46
SPG11-206ENST00000558093 CYP8B1Q9UNU6 501 aa5.9□□□□□ -1.46
SPG11-206ENST00000558093 SYNGAP1Q96PV0 1343 aa5.9□□□□□ -1.47
SPG11-206ENST00000558093 RNGTTO60942 597 aaKnown RBP5.89□□□□□ -1.47
SPG11-206ENST00000558093 BMP6P22004 513 aa5.89□□□□□ -1.47
SPG11-206ENST00000558093 TAF1CQ15572 869 aaPredicted RBP5.89□□□□□ -1.47
SPG11-206ENST00000558093 ELMO3Q96BJ8 720 aa5.89□□□□□ -1.47
SPG11-206ENST00000558093 TBC1D32Q96NH3 1257 aa5.89□□□□□ -1.47
SPG11-206ENST00000558093 FANCD2OSQ96PS1 177 aa5.89□□□□□ -1.47
SPG11-206ENST00000558093 SEMA6CQ9H3T2 930 aa5.89□□□□□ -1.47
SPG11-206ENST00000558093 ACSS3Q9H6R3 686 aa5.89□□□□□ -1.47
SPG11-206ENST00000558093 SSU72Q9NP77 194 aaKnown RBP5.89□□□□□ -1.47
SPG11-206ENST00000558093 CRIM1Q9NZV1 1036 aa5.89□□□□□ -1.47
SPG11-206ENST00000558093 PCDHA4Q9UN74 947 aa5.89□□□□□ -1.47
SPG11-206ENST00000558093 WDR64B1ANS9 1081 aa5.88□□□□□ -1.47
SPG11-206ENST00000558093 HCLS1P14317 486 aaPredicted RBP5.88□□□□□ -1.47
SPG11-206ENST00000558093 TRIM26Q12899 539 aaPredicted RBP5.88□□□□□ -1.47
SPG11-206ENST00000558093 TTLL4Q14679 1199 aa5.88□□□□□ -1.47
SPG11-206ENST00000558093 MPRIPQ6WCQ1 1025 aa5.88□□□□□ -1.47
SPG11-206ENST00000558093 SHKBP1Q8TBC3 707 aa5.88□□□□□ -1.47
SPG11-206ENST00000558093 EZH1Q92800 747 aaPredicted RBP5.88□□□□□ -1.47
SPG11-206ENST00000558093 OSBPL1AQ9BXW6 950 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms