RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 GJA3Q9Y6H8 435 aa13.55□□□□□ -0.24
FOXN3-212ENST00000556541 A0A0D9SFI3 127 aa13.54□□□□□ -0.24
FOXN3-212ENST00000556541 NMIQ13287 307 aaPredicted RBP13.54□□□□□ -0.24
FOXN3-212ENST00000556541 DIXDC1Q155Q3 683 aa13.54□□□□□ -0.24
FOXN3-212ENST00000556541 CFAP100Q494V2 611 aa13.54□□□□□ -0.24
FOXN3-212ENST00000556541 ADGRA1Q86SQ6 560 aa13.54□□□□□ -0.24
FOXN3-212ENST00000556541 MICALL2Q8IY33 904 aa13.54□□□□□ -0.24
FOXN3-212ENST00000556541 ESYT1Q9BSJ8 1104 aa13.54□□□□□ -0.24
FOXN3-212ENST00000556541 MYOZ2Q9NPC6 264 aa13.54□□□□□ -0.24
FOXN3-212ENST00000556541 ADARB2Q9NS39 739 aaKnown RBP13.54□□□□□ -0.24
FOXN3-212ENST00000556541 LAMA4Q16363 1823 aa13.54□□□□□ -0.24
FOXN3-212ENST00000556541 CCDC171Q6TFL3 1326 aa13.54□□□□□ -0.24
FOXN3-212ENST00000556541 NAV1Q8NEY1 1877 aa13.54□□□□□ -0.24
FOXN3-212ENST00000556541 MAGEB6P1A0A0J9YX57 407 aa13.53□□□□□ -0.24
FOXN3-212ENST00000556541 RHBDL3P58872 404 aa13.53□□□□□ -0.24
FOXN3-212ENST00000556541 DLGAP5Q15398 846 aa13.53□□□□□ -0.24
FOXN3-212ENST00000556541 USP50Q70EL3 339 aaPredicted RBP13.53□□□□□ -0.24
FOXN3-212ENST00000556541 ZC3H15Q8WU90 426 aaKnown RBP13.53□□□□□ -0.24
FOXN3-212ENST00000556541 AIDAQ96BJ3 306 aa13.53□□□□□ -0.24
FOXN3-212ENST00000556541 FAM227BQ96M60 508 aa13.53□□□□□ -0.24
FOXN3-212ENST00000556541 STRBPQ96SI9 672 aaKnown RBP13.53□□□□□ -0.24
FOXN3-212ENST00000556541 IDI2Q9BXS1 227 aa13.53□□□□□ -0.24
FOXN3-212ENST00000556541 PUS7LQ9H0K6 701 aaKnown RBP13.53□□□□□ -0.24
FOXN3-212ENST00000556541 HACL1Q9UJ83 578 aa13.53□□□□□ -0.24
FOXN3-212ENST00000556541 PITPNM2Q9BZ72 1349 aa13.53□□□□□ -0.24
FOXN3-212ENST00000556541 LAMB1P07942 1786 aa13.53□□□□□ -0.24
FOXN3-212ENST00000556541 MYH1P12882 1939 aa13.52□□□□□ -0.24
FOXN3-212ENST00000556541 GPAA1O43292 621 aa13.52□□□□□ -0.25
FOXN3-212ENST00000556541 REC8O95072 547 aa13.52□□□□□ -0.25
FOXN3-212ENST00000556541 KCNA4P22459 653 aa13.52□□□□□ -0.25
FOXN3-212ENST00000556541 BTDP43251 543 aa13.52□□□□□ -0.25
FOXN3-212ENST00000556541 ALX1Q15699 326 aa13.52□□□□□ -0.25
FOXN3-212ENST00000556541 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
FOXN3-212ENST00000556541 C8orf34Q49A92 452 aa13.52□□□□□ -0.25
FOXN3-212ENST00000556541 CWC27Q6UX04 472 aaKnown RBP13.52□□□□□ -0.25
FOXN3-212ENST00000556541 DSCC1Q9BVC3 393 aa13.52□□□□□ -0.25
FOXN3-212ENST00000556541 CRNKL1Q9BZJ0 848 aaKnown RBP13.52□□□□□ -0.25
FOXN3-212ENST00000556541 ATP8A2Q9NTI2 1148 aa13.52□□□□□ -0.25
FOXN3-212ENST00000556541 PGAP2Q9UHJ9 254 aa13.52□□□□□ -0.25
FOXN3-212ENST00000556541 F8W031 263 aaPredicted RBP13.51□□□□□ -0.25
FOXN3-212ENST00000556541 M0R2C6 588 aa13.51□□□□□ -0.25
FOXN3-212ENST00000556541 WNT10BO00744 389 aa13.51□□□□□ -0.25
FOXN3-212ENST00000556541 MYO1BO43795 1136 aa13.51□□□□□ -0.25
FOXN3-212ENST00000556541 MBD4O95243 580 aa13.51□□□□□ -0.25
FOXN3-212ENST00000556541 KIF4BQ2VIQ3 1234 aa13.51□□□□□ -0.25
FOXN3-212ENST00000556541 FAM83AQ86UY5 434 aa13.51□□□□□ -0.25
FOXN3-212ENST00000556541 PNMA8AQ86V59 439 aaPredicted RBP13.51□□□□□ -0.25
FOXN3-212ENST00000556541 MKRN1Q9UHC7 482 aaKnown RBP13.51□□□□□ -0.25
FOXN3-212ENST00000556541 ATRNL1Q5VV63 1379 aa13.5□□□□□ -0.25
FOXN3-212ENST00000556541 POTECB2RU33 542 aa13.5□□□□□ -0.25
FOXN3-212ENST00000556541 ENTPD3O75355 529 aa13.5□□□□□ -0.25
FOXN3-212ENST00000556541 CHGBP05060 677 aa13.5□□□□□ -0.25
FOXN3-212ENST00000556541 EPS15P42566 896 aa13.5□□□□□ -0.25
FOXN3-212ENST00000556541 CDC42EP5Q6NZY7 148 aa13.5□□□□□ -0.25
FOXN3-212ENST00000556541 ZNF589Q86UQ0 364 aaPredicted RBP13.5□□□□□ -0.25
FOXN3-212ENST00000556541 LCORLQ8N3X6 602 aa13.5□□□□□ -0.25
FOXN3-212ENST00000556541 PRMT6Q96LA8 375 aaPredicted RBP13.5□□□□□ -0.25
FOXN3-212ENST00000556541 AATFQ9NY61 560 aaKnown RBP eCLIP13.5□□□□□ -0.25
FOXN3-212ENST00000556541 BAZ2AQ9UIF9 1905 aaKnown RBP13.5□□□□□ -0.25
FOXN3-212ENST00000556541 PATL2C9JE40 543 aaKnown RBP13.49□□□□□ -0.25
FOXN3-212ENST00000556541 WDHD1O75717 1129 aaPredicted RBP13.49□□□□□ -0.25
FOXN3-212ENST00000556541 VEGFAP15692 232 aaPredicted RBP13.49□□□□□ -0.25
FOXN3-212ENST00000556541 EPHX2P34913 555 aa13.49□□□□□ -0.25
FOXN3-212ENST00000556541 NT5C2P49902 561 aa13.49□□□□□ -0.25
FOXN3-212ENST00000556541 TNFAIP1Q13829 316 aa13.49□□□□□ -0.25
FOXN3-212ENST00000556541 MIGA1Q8NAN2 632 aa13.49□□□□□ -0.25
FOXN3-212ENST00000556541 SEC62Q99442 399 aaKnown RBP13.49□□□□□ -0.25
FOXN3-212ENST00000556541 TAF1DQ9H5J8 278 aaPredicted RBP13.49□□□□□ -0.25
FOXN3-212ENST00000556541 TMOD2Q9NZR1 351 aa13.49□□□□□ -0.25
FOXN3-212ENST00000556541 ZNF70Q9UC06 446 aaPredicted RBP13.49□□□□□ -0.25
FOXN3-212ENST00000556541 PPP2R3BQ9Y5P8 575 aa13.49□□□□□ -0.25
FOXN3-212ENST00000556541 POLR2AP24928 1970 aaKnown RBP13.49□□□□□ -0.25
FOXN3-212ENST00000556541 GSG1L2A8MUP6 293 aa13.48□□□□□ -0.25
FOXN3-212ENST00000556541 FOXP2O15409 715 aa13.48□□□□□ -0.25
FOXN3-212ENST00000556541 HSPD1P10809 573 aaKnown RBP13.48□□□□□ -0.25
FOXN3-212ENST00000556541 RBM5P52756 815 aaKnown RBP eCLIP13.48□□□□□ -0.25
FOXN3-212ENST00000556541 DYNLL1P63167 89 aaKnown RBP13.48□□□□□ -0.25
FOXN3-212ENST00000556541 SLFNL1Q499Z3 407 aa13.48□□□□□ -0.25
FOXN3-212ENST00000556541 SBK1Q52WX2 424 aa13.48□□□□□ -0.25
FOXN3-212ENST00000556541 KIAA1211Q6ZU35 1233 aa13.48□□□□□ -0.25
FOXN3-212ENST00000556541 SAMD7Q7Z3H4 446 aa13.48□□□□□ -0.25
FOXN3-212ENST00000556541 APOBEC3FQ8IUX4 373 aaKnown RBP13.48□□□□□ -0.25
FOXN3-212ENST00000556541 TEX11Q8IYF3 940 aa13.48□□□□□ -0.25
FOXN3-212ENST00000556541 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
FOXN3-212ENST00000556541 TRPM4Q8TD43 1214 aa13.48□□□□□ -0.25
FOXN3-212ENST00000556541 SH3RF3Q8TEJ3 882 aaPredicted RBP13.48□□□□□ -0.25
FOXN3-212ENST00000556541 MAP4K1Q92918 833 aa13.48□□□□□ -0.25
FOXN3-212ENST00000556541 NACAP1Q9BZK3 213 aa13.48□□□□□ -0.25
FOXN3-212ENST00000556541 LSG1Q9H089 658 aaKnown RBP13.48□□□□□ -0.25
FOXN3-212ENST00000556541 IL25Q9H293 177 aa13.48□□□□□ -0.25
FOXN3-212ENST00000556541 ARMT1Q9H993 441 aa13.48□□□□□ -0.25
FOXN3-212ENST00000556541 USP40Q9NVE5 1235 aa13.48□□□□□ -0.25
FOXN3-212ENST00000556541 FLT1P17948 1338 aa13.47□□□□□ -0.25
FOXN3-212ENST00000556541 SHTN1A0MZ66 631 aa13.47□□□□□ -0.25
FOXN3-212ENST00000556541 DDRGK1Q96HY6 314 aa13.47□□□□□ -0.25
FOXN3-212ENST00000556541 BACH2Q9BYV9 841 aa13.47□□□□□ -0.25
FOXN3-212ENST00000556541 DHX36Q9H2U1 1008 aaKnown RBP13.47□□□□□ -0.25
FOXN3-212ENST00000556541 DCP1AQ9NPI6 582 aaPredicted RBP13.47□□□□□ -0.25
FOXN3-212ENST00000556541 ARPP21Q9UBL0 812 aaPredicted RBP13.47□□□□□ -0.25
FOXN3-212ENST00000556541 CTNNA3Q9UI47 895 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms