RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 PROM2Q8N271 834 aa17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 NCOA7Q8NI08 942 aa17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 NBPF3Q9H094 633 aa17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 ANKIB1Q9P2G1 1089 aa17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 ZSCAN20P17040 1043 aaPredicted RBP17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 CYP7A1P22680 504 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 FOSBP53539 338 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 TRDNQ13061 729 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 LCORLQ8N3X6 602 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 NKX2-3Q8TAU0 364 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 SCN7AQ01118 1682 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 SPDYE4A6NLX3 237 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 TXNRD1Q16881 649 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 ADGRA1Q86SQ6 560 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 TXNRD3Q86VQ6 643 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 TBC1D10CQ8IV04 446 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 CKAP2LQ8IYA6 745 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 IFNL3Q8IZI9 196 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 NAPBQ9H115 298 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 ZNF804BA4D1E1 1349 aa17.14■□□□□ 0.33
PPP4R3A-201ENST00000554308 PATL2C9JE40 543 aaKnown RBP17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 ADRA2BP18089 450 aa17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 PDCP20941 246 aa17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 PDIA3P30101 505 aaKnown RBP17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 SLC27A3Q5K4L6 730 aa17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 PRR5LQ6MZQ0 368 aa17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 MRVI1Q9Y6F6 885 aa17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 SLC4A4Q9Y6R1 1079 aa17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 PFKFB2O60825 505 aa17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 CCDC192P0DO97 292 aa17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 LRMPQ12912 555 aa17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 AGXT2Q9BYV1 514 aa17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 EPB41L4AQ9HCS5 686 aaPredicted RBP17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 LY75O60449 1722 aa17.13■□□□□ 0.33
PPP4R3A-201ENST00000554308 HIBADHP31937 336 aaKnown RBP17.12■□□□□ 0.33
PPP4R3A-201ENST00000554308 CTDSPL2Q05D32 466 aa17.12■□□□□ 0.33
PPP4R3A-201ENST00000554308 CHAF1AQ13111 956 aaPredicted RBP17.12■□□□□ 0.33
PPP4R3A-201ENST00000554308 MB21D2Q8IYB1 491 aaPredicted RBP17.12■□□□□ 0.33
PPP4R3A-201ENST00000554308 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
PPP4R3A-201ENST00000554308 LAMB2P55268 1798 aa17.12■□□□□ 0.33
PPP4R3A-201ENST00000554308 GSG1L2A8MUP6 293 aa17.12■□□□□ 0.33
PPP4R3A-201ENST00000554308 B4E1Z4 1266 aa17.12■□□□□ 0.33
PPP4R3A-201ENST00000554308 SERPINB2P05120 415 aa17.12■□□□□ 0.33
PPP4R3A-201ENST00000554308 ANTXR2P58335 489 aa17.12■□□□□ 0.33
PPP4R3A-201ENST00000554308 ANKRD2Q9GZV1 360 aa17.12■□□□□ 0.33
PPP4R3A-201ENST00000554308 TFIP11Q9UBB9 837 aaKnown RBP17.12■□□□□ 0.33
PPP4R3A-201ENST00000554308 TDO2P48775 406 aa17.11■□□□□ 0.33
PPP4R3A-201ENST00000554308 TYRO3Q06418 890 aa17.11■□□□□ 0.33
PPP4R3A-201ENST00000554308 SDR42E1Q8WUS8 393 aa17.11■□□□□ 0.33
PPP4R3A-201ENST00000554308 NRBP1Q9UHY1 535 aa17.11■□□□□ 0.33
PPP4R3A-201ENST00000554308 MYH7P12883 1935 aa17.11■□□□□ 0.33
PPP4R3A-201ENST00000554308 CTDNEP1O95476 244 aa17.11■□□□□ 0.33
PPP4R3A-201ENST00000554308 FBXO33Q7Z6M2 555 aa17.11■□□□□ 0.33
PPP4R3A-201ENST00000554308 RPGRQ92834 1020 aaKnown RBP17.11■□□□□ 0.33
PPP4R3A-201ENST00000554308 TOMM22Q9NS69 142 aa17.11■□□□□ 0.33
PPP4R3A-201ENST00000554308 KLF18A0A0U1RQI7 1052 aa17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 H3BQV1 296 aa17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 RBM6P78332 1123 aaKnown RBP17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 DMTNQ08495 405 aa17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 IFFO2Q5TF58 517 aa17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 NUP62CLQ9H1M0 184 aa17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 APBA3O96018 575 aa17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 MAP3K11Q16584 847 aa17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 CYB5R4Q7L1T6 521 aa17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 NSUN7Q8NE18 718 aaKnown RBP17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 FAM200AQ8TCP9 573 aa17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 ZNF274Q96GC6 653 aaPredicted RBP17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 GPR101Q96P66 508 aaPredicted RBP17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 DACT1Q9NYF0 836 aa17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 COL1A1P02452 1464 aaPredicted RBP17.1■□□□□ 0.33
PPP4R3A-201ENST00000554308 PTPDC1A2A3K4 754 aa17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 U2AF2P26368 475 aaKnown RBP eCLIP17.09■□□□□ 0.332e-7■□□□□ 8.5
PPP4R3A-201ENST00000554308 GRAPQ13588 217 aa17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 RRP12Q5JTH9 1297 aaKnown RBP17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 PDCL2Q8N4E4 241 aa17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 GRAPLQ8TC17 118 aaPredicted RBP17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 NACAP1Q9BZK3 213 aa17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 TAOK2Q9UL54 1235 aa17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 NEDD4P46934 1319 aa17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 LAMA4Q16363 1823 aa17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 ANO6Q4KMQ2 910 aa17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 NAA16Q6N069 864 aaPredicted RBP17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 CCDC186Q7Z3E2 898 aa17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 CBX8Q9HC52 389 aa17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 ARAP2Q8WZ64 1704 aa17.09■□□□□ 0.33
PPP4R3A-201ENST00000554308 MAGEB6P1A0A0J9YX57 407 aa17.08■□□□□ 0.33
PPP4R3A-201ENST00000554308 GOLGA8BA8MQT2 603 aa17.08■□□□□ 0.33
PPP4R3A-201ENST00000554308 RXRAP19793 462 aa17.08■□□□□ 0.33
PPP4R3A-201ENST00000554308 DYNLL1P63167 89 aaKnown RBP17.08■□□□□ 0.33
PPP4R3A-201ENST00000554308 KRT85P78386 507 aa17.08■□□□□ 0.33
PPP4R3A-201ENST00000554308 ST5P78524 1137 aa17.08■□□□□ 0.33
PPP4R3A-201ENST00000554308 MINDY4BA8MYZ0 360 aa17.08■□□□□ 0.32
PPP4R3A-201ENST00000554308 PRDX5P30044 214 aa17.08■□□□□ 0.32
PPP4R3A-201ENST00000554308 ZNF772Q68DY9 489 aaPredicted RBP17.08■□□□□ 0.32
PPP4R3A-201ENST00000554308 ZNF384Q8TF68 577 aa17.08■□□□□ 0.32
PPP4R3A-201ENST00000554308 C4AP0C0L4 1744 aa17.08■□□□□ 0.32
PPP4R3A-201ENST00000554308 GUCY1B3Q02153 619 aa17.07■□□□□ 0.32
PPP4R3A-201ENST00000554308 DDR1Q08345 913 aa17.07■□□□□ 0.32
PPP4R3A-201ENST00000554308 SMARCC2Q8TAQ2 1214 aa17.07■□□□□ 0.32
PPP4R3A-201ENST00000554308 LLPHQ9BRT6 129 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms