RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 C1QTNF8P60827 252 aa16.77■□□□□ 0.28
TUBB3-202ENST00000553656 LRRFIP1Q32MZ4 808 aaKnown RBP16.77■□□□□ 0.28
TUBB3-202ENST00000553656 SLC9C2Q5TAH2 1124 aa16.77■□□□□ 0.28
TUBB3-202ENST00000553656 ZSCAN25Q6NSZ9 544 aa16.77■□□□□ 0.28
TUBB3-202ENST00000553656 DOCK2Q92608 1830 aa16.76■□□□□ 0.27
TUBB3-202ENST00000553656 ADM5C9JUS6 153 aa16.76■□□□□ 0.27
TUBB3-202ENST00000553656 MAP4K4O95819 1239 aaPredicted RBP16.76■□□□□ 0.27
TUBB3-202ENST00000553656 PLCG2P16885 1265 aa16.76■□□□□ 0.27
TUBB3-202ENST00000553656 PLEKHM2Q8IWE5 1019 aa16.76■□□□□ 0.27
TUBB3-202ENST00000553656 USP40Q9NVE5 1235 aa16.76■□□□□ 0.27
TUBB3-202ENST00000553656 GPR75-ASB3A0A0A6YYF3 556 aa16.75■□□□□ 0.27
TUBB3-202ENST00000553656 TCP10L2B9ZVM9 353 aa16.75■□□□□ 0.27
TUBB3-202ENST00000553656 PDE6AP16499 860 aa16.75■□□□□ 0.27
TUBB3-202ENST00000553656 CDC42EP5Q6NZY7 148 aa16.75■□□□□ 0.27
TUBB3-202ENST00000553656 CERS3Q8IU89 383 aa16.75■□□□□ 0.27
TUBB3-202ENST00000553656 KBTBD3Q8NAB2 608 aa16.75■□□□□ 0.27
TUBB3-202ENST00000553656 ZNF384Q8TF68 577 aa16.75■□□□□ 0.27
TUBB3-202ENST00000553656 FSD1Q9BTV5 496 aa16.75■□□□□ 0.27
TUBB3-202ENST00000553656 OSBPL3Q9H4L5 887 aa16.75■□□□□ 0.27
TUBB3-202ENST00000553656 PPP2R3BQ9Y5P8 575 aa16.75■□□□□ 0.27
TUBB3-202ENST00000553656 TRAF5O00463 557 aa16.74■□□□□ 0.27
TUBB3-202ENST00000553656 ITGBL1O95965 494 aaPredicted RBP16.74■□□□□ 0.27
TUBB3-202ENST00000553656 DEFB129Q9H1M3 183 aa16.74■□□□□ 0.27
TUBB3-202ENST00000553656 ZNF408Q9H9D4 720 aa16.74■□□□□ 0.27
TUBB3-202ENST00000553656 AATFQ9NY61 560 aaKnown RBP eCLIP16.74■□□□□ 0.27
TUBB3-202ENST00000553656 SCAF8Q9UPN6 1271 aaKnown RBP16.74■□□□□ 0.27
TUBB3-202ENST00000553656 MYO5AQ9Y4I1 1855 aaKnown RBP16.73■□□□□ 0.27
TUBB3-202ENST00000553656 ZNF532Q9HCE3 1301 aa16.73■□□□□ 0.27
TUBB3-202ENST00000553656 TRIM6-TRIM34B2RNG4 842 aa16.73■□□□□ 0.27
TUBB3-202ENST00000553656 ZFYP08048 801 aaPredicted RBP16.73■□□□□ 0.27
TUBB3-202ENST00000553656 PDE4AP27815 886 aa16.73■□□□□ 0.27
TUBB3-202ENST00000553656 NF2P35240 595 aa16.73■□□□□ 0.27
TUBB3-202ENST00000553656 ADD2P35612 726 aa16.73■□□□□ 0.27
TUBB3-202ENST00000553656 CACNB3P54284 484 aa16.73■□□□□ 0.27
TUBB3-202ENST00000553656 FKBP1CQ5VVH2 108 aa16.73■□□□□ 0.27
TUBB3-202ENST00000553656 EVI5LQ96CN4 794 aa16.73■□□□□ 0.27
TUBB3-202ENST00000553656 CDCA5Q96FF9 252 aa16.73■□□□□ 0.27
TUBB3-202ENST00000553656 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
TUBB3-202ENST00000553656 MAGEB6P1A0A0J9YX57 407 aa16.72■□□□□ 0.27
TUBB3-202ENST00000553656 RASA3Q14644 834 aa16.72■□□□□ 0.27
TUBB3-202ENST00000553656 TEX11Q8IYF3 940 aa16.72■□□□□ 0.27
TUBB3-202ENST00000553656 MIGA1Q8NAN2 632 aa16.72■□□□□ 0.27
TUBB3-202ENST00000553656 CELF2O95319 508 aaKnown RBP16.71■□□□□ 0.27
TUBB3-202ENST00000553656 PPP4CP60510 307 aa16.71■□□□□ 0.27
TUBB3-202ENST00000553656 UBE3CQ15386 1083 aa16.71■□□□□ 0.27
TUBB3-202ENST00000553656 SUPT20HL1Q3ZLR7 823 aa16.71■□□□□ 0.27
TUBB3-202ENST00000553656 ADGRA1Q86SQ6 560 aa16.71■□□□□ 0.27
TUBB3-202ENST00000553656 FAM83AQ86UY5 434 aa16.71■□□□□ 0.27
TUBB3-202ENST00000553656 RILPL2Q969X0 211 aa16.71■□□□□ 0.27
TUBB3-202ENST00000553656 POLR2AP24928 1970 aaKnown RBP16.71■□□□□ 0.27
TUBB3-202ENST00000553656 RNF113AO15541 343 aaKnown RBP16.7■□□□□ 0.26
TUBB3-202ENST00000553656 APLP1P51693 650 aa16.7■□□□□ 0.26
TUBB3-202ENST00000553656 RHBDL3P58872 404 aa16.7■□□□□ 0.26
TUBB3-202ENST00000553656 TCP10Q12799 353 aa16.7■□□□□ 0.26
TUBB3-202ENST00000553656 PICALMQ13492 652 aa16.7■□□□□ 0.26
TUBB3-202ENST00000553656 SH3RF3Q8TEJ3 882 aaPredicted RBP16.7■□□□□ 0.26
TUBB3-202ENST00000553656 MYH7P12883 1935 aa16.7■□□□□ 0.26
TUBB3-202ENST00000553656 TCRBV5S4A2TA0A5A2 114 aa16.69■□□□□ 0.26
TUBB3-202ENST00000553656 TMEM88BA6NKF7 163 aa16.69■□□□□ 0.26
TUBB3-202ENST00000553656 ENTPD3O75355 529 aa16.69■□□□□ 0.26
TUBB3-202ENST00000553656 HSPA6P17066 643 aa16.69■□□□□ 0.26
TUBB3-202ENST00000553656 RGS3P49796 1198 aa16.69■□□□□ 0.26
TUBB3-202ENST00000553656 FMR1Q06787 632 aaKnown RBP eCLIP16.69■□□□□ 0.26
TUBB3-202ENST00000553656 NFIAQ12857 509 aa16.69■□□□□ 0.26
TUBB3-202ENST00000553656 PRAMEF18Q5VWM3 479 aa16.69■□□□□ 0.26
TUBB3-202ENST00000553656 DLK2Q6UY11 383 aa16.69■□□□□ 0.26
TUBB3-202ENST00000553656 ZSCAN29Q8IWY8 852 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-202ENST00000553656 FAM151AQ8WW52 585 aa16.69■□□□□ 0.26
TUBB3-202ENST00000553656 APPBP2Q92624 585 aa16.69■□□□□ 0.26
TUBB3-202ENST00000553656 AIDAQ96BJ3 306 aa16.69■□□□□ 0.26
TUBB3-202ENST00000553656 HOOK2Q96ED9 719 aa16.69■□□□□ 0.26
TUBB3-202ENST00000553656 IDI2Q9BXS1 227 aa16.69■□□□□ 0.26
TUBB3-202ENST00000553656 CNTNAP1P78357 1384 aa16.68■□□□□ 0.26
TUBB3-202ENST00000553656 WDHD1O75717 1129 aaPredicted RBP16.68■□□□□ 0.26
TUBB3-202ENST00000553656 USP5P45974 858 aa16.68■□□□□ 0.26
TUBB3-202ENST00000553656 DYNLL1P63167 89 aaKnown RBP16.68■□□□□ 0.26
TUBB3-202ENST00000553656 TTLL12Q14166 644 aaPredicted RBP16.68■□□□□ 0.26
TUBB3-202ENST00000553656 TTC22Q5TAA0 569 aa16.68■□□□□ 0.26
TUBB3-202ENST00000553656 C2orf69Q8N8R5 385 aa16.68■□□□□ 0.26
TUBB3-202ENST00000553656 CRNKL1Q9BZJ0 848 aaKnown RBP16.68■□□□□ 0.26
TUBB3-202ENST00000553656 TMEM39BQ9GZU3 492 aa16.68■□□□□ 0.26
TUBB3-202ENST00000553656 FAM198AQ9UFP1 575 aa16.68■□□□□ 0.26
TUBB3-202ENST00000553656 ABT1Q9ULW3 272 aaKnown RBP16.68■□□□□ 0.26
TUBB3-202ENST00000553656 TRPM7Q96QT4 1865 aa16.67■□□□□ 0.26
TUBB3-202ENST00000553656 RFX7Q2KHR2 1363 aa16.67■□□□□ 0.26
TUBB3-202ENST00000553656 RPAP1Q9BWH6 1393 aaPredicted RBP16.67■□□□□ 0.26
TUBB3-202ENST00000553656 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
TUBB3-202ENST00000553656 MBD4O95243 580 aa16.67■□□□□ 0.26
TUBB3-202ENST00000553656 TICAM2Q86XR7 235 aa16.67■□□□□ 0.26
TUBB3-202ENST00000553656 TGFBRAP1Q8WUH2 860 aa16.67■□□□□ 0.26
TUBB3-202ENST00000553656 GBA2Q9HCG7 927 aaPredicted RBP16.67■□□□□ 0.26
TUBB3-202ENST00000553656 CREBZFQ9NS37 354 aa16.67■□□□□ 0.26
TUBB3-202ENST00000553656 PPP1R12BO60237 982 aaPredicted RBP16.66■□□□□ 0.26
TUBB3-202ENST00000553656 SLFNL1Q499Z3 407 aa16.66■□□□□ 0.26
TUBB3-202ENST00000553656 NBPF12Q5TAG4 269 aaPredicted RBP16.66■□□□□ 0.26
TUBB3-202ENST00000553656 CST9Q5W186 159 aa16.66■□□□□ 0.26
TUBB3-202ENST00000553656 DDRGK1Q96HY6 314 aa16.66■□□□□ 0.26
TUBB3-202ENST00000553656 RIOK1Q9BRS2 568 aaKnown RBP16.66■□□□□ 0.26
TUBB3-202ENST00000553656 ARMT1Q9H993 441 aa16.66■□□□□ 0.26
TUBB3-202ENST00000553656 HIP1O00291 1037 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms