RNA–Protein interactions for RNA: ENST00000552639.1

AC087897.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC087897.2, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087897.2-201ENST00000552639 TRAPPC3LQ5T215 181 aa7.89□□□□□ -1.15
AC087897.2-201ENST00000552639 SVOPQ8N4V2 548 aa7.89□□□□□ -1.15
AC087897.2-201ENST00000552639 GATAD2BQ8WXI9 593 aa7.89□□□□□ -1.15
AC087897.2-201ENST00000552639 UBXN4Q92575 508 aa7.89□□□□□ -1.15
AC087897.2-201ENST00000552639 SEC16BQ96JE7 1060 aa7.89□□□□□ -1.15
AC087897.2-201ENST00000552639 NRSN2Q9GZP1 204 aa7.89□□□□□ -1.15
AC087897.2-201ENST00000552639 MAP1SQ66K74 1059 aaPredicted RBP7.88□□□□□ -1.15
AC087897.2-201ENST00000552639 JARID2Q92833 1246 aaPredicted RBP7.88□□□□□ -1.15
AC087897.2-201ENST00000552639 KRT82Q9NSB4 513 aa7.88□□□□□ -1.15
AC087897.2-201ENST00000552639 CACNA2D2Q9NY47 1150 aa7.88□□□□□ -1.15
AC087897.2-201ENST00000552639 UBP1Q9NZI7 540 aa7.88□□□□□ -1.15
AC087897.2-201ENST00000552639 FAM221AA4D161 298 aa7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 ARHGEF15O94989 841 aa7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 F13A1P00488 732 aa7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 ATP2B1P20020 1258 aa7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 MAOBP27338 520 aa7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 CD68P34810 354 aaPredicted RBP7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 HNRNPUQ00839 825 aaKnown RBP eCLIP7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 APOBRQ0VD83 1088 aa7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 COL9A2Q14055 689 aaPredicted RBP7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 SEPT6Q14141 434 aa7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 BNC2Q6ZN30 1099 aaPredicted RBP7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 GALNT11Q8NCW6 608 aa7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 KCNB2Q92953 911 aa7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 GAL3ST3Q96A11 431 aa7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 LRRC3Q9BY71 257 aa7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 PPP1R1BQ9UD71 204 aaPredicted RBP7.87□□□□□ -1.15
AC087897.2-201ENST00000552639 PIK3R2O00459 728 aa7.86□□□□□ -1.15
AC087897.2-201ENST00000552639 CILPO75339 1184 aa7.86□□□□□ -1.15
AC087897.2-201ENST00000552639 DEAF1O75398 565 aaPredicted RBP7.86□□□□□ -1.15
AC087897.2-201ENST00000552639 MPP2Q14168 576 aa7.86□□□□□ -1.15
AC087897.2-201ENST00000552639 HP1BP3Q5SSJ5 553 aaPredicted RBP7.86□□□□□ -1.15
AC087897.2-201ENST00000552639 LINC00114Q6XXX2 140 aa7.86□□□□□ -1.15
AC087897.2-201ENST00000552639 SLITRK4Q8IW52 837 aa7.86□□□□□ -1.15
AC087897.2-201ENST00000552639 NKD1Q969G9 470 aa7.86□□□□□ -1.15
AC087897.2-201ENST00000552639 ARMC5Q96C12 935 aa7.86□□□□□ -1.15
AC087897.2-201ENST00000552639 ADAMTS8Q9UP79 889 aa7.86□□□□□ -1.15
AC087897.2-201ENST00000552639 A0A0A0MRY4 1105 aa7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 SPDYE3A6NKU9 549 aa7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 ECEL1O95672 775 aa7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 FGRP09769 529 aa7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 CRKP46108 304 aa7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 NLRP12P59046 1061 aa7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 RAC1P63000 192 aa7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 CWF19L2Q2TBE0 894 aaKnown RBP7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 MPRIPQ6WCQ1 1025 aa7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 FBXO11Q86XK2 927 aa7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 TRIM11Q96F44 468 aa7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 USP26Q9BXU7 913 aa7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 ZC3H12CQ9C0D7 883 aaKnown RBP7.85□□□□□ -1.15
AC087897.2-201ENST00000552639 GNB5O14775 395 aa7.84□□□□□ -1.15
AC087897.2-201ENST00000552639 ADAM11O75078 769 aa7.84□□□□□ -1.15
AC087897.2-201ENST00000552639 BPNT1O95861 308 aa7.84□□□□□ -1.15
AC087897.2-201ENST00000552639 SOX9P48436 509 aa7.84□□□□□ -1.15
AC087897.2-201ENST00000552639 SNRPNP63162 240 aaKnown RBP7.84□□□□□ -1.15
AC087897.2-201ENST00000552639 PTPN11Q06124 597 aaPredicted RBP7.84□□□□□ -1.15
AC087897.2-201ENST00000552639 MCF2L2Q86YR7 1114 aa7.84□□□□□ -1.15
AC087897.2-201ENST00000552639 FMR1NBQ8N0W7 255 aaPredicted RBP7.84□□□□□ -1.15
AC087897.2-201ENST00000552639 GPBAR1Q8TDU6 330 aa7.84□□□□□ -1.15
AC087897.2-201ENST00000552639 ACSBG1Q96GR2 724 aa7.84□□□□□ -1.15
AC087897.2-201ENST00000552639 CCDC86Q9H6F5 360 aaKnown RBP7.84□□□□□ -1.15
AC087897.2-201ENST00000552639 GINM1Q9NU53 330 aa7.84□□□□□ -1.15
AC087897.2-201ENST00000552639 EFR3BQ9Y2G0 817 aa7.84□□□□□ -1.15
AC087897.2-201ENST00000552639 LOC100289279A0A1B0GTE1 492 aa7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 DLL1O00548 723 aa7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 DDX3YO15523 660 aaKnown RBP7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 NASPP49321 788 aaPredicted RBP7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 RPL6Q02878 288 aaKnown RBP7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 PDE3AQ14432 1141 aa7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 FOXD4L6Q3SYB3 417 aaPredicted RBP7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 SEZ6Q53EL9 994 aa7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 FOXD4L3Q6VB84 417 aaPredicted RBP7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 REC114Q7Z4M0 266 aa7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 FBXO27Q8NI29 283 aa7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 PLVAPQ9BX97 442 aa7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 MKL2Q9ULH7 1088 aa7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 STRIP2Q9ULQ0 834 aa7.83□□□□□ -1.16
AC087897.2-201ENST00000552639 TLR3O15455 904 aaKnown RBP7.82□□□□□ -1.16
AC087897.2-201ENST00000552639 CTSBP07858 339 aa7.82□□□□□ -1.16
AC087897.2-201ENST00000552639 KIF4BQ2VIQ3 1234 aa7.82□□□□□ -1.16
AC087897.2-201ENST00000552639 KCNK4Q9NYG8 393 aa7.82□□□□□ -1.16
AC087897.2-201ENST00000552639 PCDHA4Q9UN74 947 aa7.82□□□□□ -1.16
AC087897.2-201ENST00000552639 SYNGAP1Q96PV0 1343 aa7.81□□□□□ -1.16
AC087897.2-201ENST00000552639 ZNF862O60290 1169 aa7.81□□□□□ -1.16
AC087897.2-201ENST00000552639 GTF2F1P35269 517 aaKnown RBP eCLIP7.81□□□□□ -1.16
AC087897.2-201ENST00000552639 ZNF165P49910 485 aa7.81□□□□□ -1.16
AC087897.2-201ENST00000552639 TRIM28Q13263 835 aaKnown RBP7.81□□□□□ -1.16
AC087897.2-201ENST00000552639 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.81□□□□□ -1.16
AC087897.2-201ENST00000552639 REXO1Q8N1G1 1221 aaKnown RBP7.81□□□□□ -1.16
AC087897.2-201ENST00000552639 DHX38Q92620 1227 aaKnown RBP7.81□□□□□ -1.16
AC087897.2-201ENST00000552639 NOP53Q9NZM5 478 aaKnown RBP7.81□□□□□ -1.16
AC087897.2-201ENST00000552639 SNCAIPQ9Y6H5 919 aa7.81□□□□□ -1.16
AC087897.2-201ENST00000552639 DLGAP3O95886 979 aa7.8□□□□□ -1.16
AC087897.2-201ENST00000552639 SSBP05455 408 aaKnown RBP eCLIP7.8□□□□□ -1.16
AC087897.2-201ENST00000552639 SLFN14P0C7P3 912 aa7.8□□□□□ -1.16
AC087897.2-201ENST00000552639 LIG1P18858 919 aa7.8□□□□□ -1.16
AC087897.2-201ENST00000552639 MCM4P33991 863 aa7.8□□□□□ -1.16
AC087897.2-201ENST00000552639 DUOXA2Q1HG44 320 aa7.8□□□□□ -1.16
AC087897.2-201ENST00000552639 EXOSC6Q5RKV6 272 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms