RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 HSD3B7Q9H2F3 369 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 L2HGDHQ9H9P8 463 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 ATG3Q9NT62 314 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 PSDA5PKW4 1024 aaPredicted RBP11.9□□□□□ -0.5
ERBB3-214ENST00000550070 TTC36A6NLP5 189 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 CPLX1O14810 134 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 ATP1A3P13637 1013 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 CCDC158Q5M9N0 1113 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 NCOA7Q8NI08 942 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 XAGE2Q96GT9 111 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 AIFM3Q96NN9 605 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 DENND2AQ9ULE3 1009 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 C4AP0C0L4 1744 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 C4BP0C0L5 1744 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 ZAP70P43403 619 aa11.89□□□□□ -0.51
ERBB3-214ENST00000550070 FANCCQ00597 558 aa11.89□□□□□ -0.51
ERBB3-214ENST00000550070 CCDC93Q567U6 631 aa11.89□□□□□ -0.51
ERBB3-214ENST00000550070 GORABQ5T7V8 394 aa11.89□□□□□ -0.51
ERBB3-214ENST00000550070 ZNF771Q7L3S4 317 aaPredicted RBP11.89□□□□□ -0.51
ERBB3-214ENST00000550070 KRT222Q8N1A0 295 aa11.89□□□□□ -0.51
ERBB3-214ENST00000550070 NKX2-3Q8TAU0 364 aa11.89□□□□□ -0.51
ERBB3-214ENST00000550070 SEMA3FQ13275 785 aa11.89□□□□□ -0.51
ERBB3-214ENST00000550070 SLC39A14Q15043 492 aa11.89□□□□□ -0.51
ERBB3-214ENST00000550070 ERCC6LQ2NKX8 1250 aa11.89□□□□□ -0.51
ERBB3-214ENST00000550070 PI16Q6UXB8 463 aa11.89□□□□□ -0.51
ERBB3-214ENST00000550070 ZNF446Q9NWS9 450 aa11.89□□□□□ -0.51
ERBB3-214ENST00000550070 ZFYP08048 801 aaPredicted RBP11.88□□□□□ -0.51
ERBB3-214ENST00000550070 KCNJ6P48051 423 aa11.88□□□□□ -0.51
ERBB3-214ENST00000550070 TPM4P67936 248 aa11.88□□□□□ -0.51
ERBB3-214ENST00000550070 CEP120Q8N960 986 aa11.88□□□□□ -0.51
ERBB3-214ENST00000550070 APPBP2Q92624 585 aa11.88□□□□□ -0.51
ERBB3-214ENST00000550070 DPF2Q92785 391 aa11.88□□□□□ -0.51
ERBB3-214ENST00000550070 ZNF213O14771 459 aa11.88□□□□□ -0.51
ERBB3-214ENST00000550070 IKBKBO14920 756 aa11.88□□□□□ -0.51
ERBB3-214ENST00000550070 LRRFIP1Q32MZ4 808 aaKnown RBP11.88□□□□□ -0.51
ERBB3-214ENST00000550070 RALYLQ86SE5 291 aaKnown RBP11.88□□□□□ -0.51
ERBB3-214ENST00000550070 CCDC85AQ96PX6 553 aaPredicted RBP11.88□□□□□ -0.51
ERBB3-214ENST00000550070 NBPF3Q9H094 633 aa11.88□□□□□ -0.51
ERBB3-214ENST00000550070 CCDC57Q2TAC2 916 aa11.88□□□□□ -0.51
ERBB3-214ENST00000550070 TUBE1Q9UJT0 475 aa11.88□□□□□ -0.51
ERBB3-214ENST00000550070 GPAA1O43292 621 aa11.87□□□□□ -0.51
ERBB3-214ENST00000550070 SYKP43405 635 aa11.87□□□□□ -0.51
ERBB3-214ENST00000550070 TERF2Q15554 542 aa11.87□□□□□ -0.51
ERBB3-214ENST00000550070 SHC4Q6S5L8 630 aa11.87□□□□□ -0.51
ERBB3-214ENST00000550070 TIGD1Q96MW7 591 aa11.87□□□□□ -0.51
ERBB3-214ENST00000550070 HPSEQ9Y251 543 aa11.87□□□□□ -0.51
ERBB3-214ENST00000550070 CPDO75976 1380 aa11.87□□□□□ -0.51
ERBB3-214ENST00000550070 H2AFXP16104 143 aaPredicted RBP11.87□□□□□ -0.51
ERBB3-214ENST00000550070 RXRAP19793 462 aa11.87□□□□□ -0.51
ERBB3-214ENST00000550070 ALG1Q9BT22 464 aa11.87□□□□□ -0.51
ERBB3-214ENST00000550070 AKAP2Q9Y2D5 859 aa11.87□□□□□ -0.51
ERBB3-214ENST00000550070 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.87□□□□□ -0.51
ERBB3-214ENST00000550070 MYH7P12883 1935 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 IRF6O14896 467 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 UBASH3AP57075 661 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 PNOCQ13519 176 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 PTPAQ15257 358 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 PTPN21Q16825 1174 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 CYB5R4Q7L1T6 521 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 VPS37DQ86XT2 251 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 CLIC6Q96NY7 704 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 C19orf44Q9H6X5 657 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 ST7Q9NRC1 585 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 CDC27P30260 824 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 GOLGA8FQ08AF8 430 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 GOLGA8DPQ0D2H9 430 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 KRT40Q6A162 431 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 HOMER1Q86YM7 354 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 ISCA1Q9BUE6 129 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 SENP2Q9HC62 589 aa11.86□□□□□ -0.51
ERBB3-214ENST00000550070 ZMYM6O95789 1325 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 WDR19Q8NEZ3 1342 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 UBR2Q8IWV8 1755 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 FANCGO15287 622 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 PPP6R2O75170 966 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 ETF1P62495 437 aaKnown RBP11.85□□□□□ -0.51
ERBB3-214ENST00000550070 DHX8Q14562 1220 aaKnown RBP11.85□□□□□ -0.51
ERBB3-214ENST00000550070 TRIM65Q6PJ69 517 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 TBC1D10CQ8IV04 446 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 PHKBQ93100 1093 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 MAP3K14Q99558 947 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 TMX1Q9H3N1 280 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 DNAI1Q9UI46 699 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 PARP4Q9UKK3 1724 aaKnown RBP11.85□□□□□ -0.51
ERBB3-214ENST00000550070 XIRP1Q702N8 1843 aaKnown RBP11.85□□□□□ -0.51
ERBB3-214ENST00000550070 PLEKHG2Q9H7P9 1386 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 TMEM232C9JQI7 657 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 NRDCO43847 1150 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 ATF3P18847 181 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 METAP2P50579 478 aaKnown RBP eCLIP11.85□□□□□ -0.51
ERBB3-214ENST00000550070 MYL5Q02045 173 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 FOXP4Q8IVH2 680 aaPredicted RBP11.85□□□□□ -0.51
ERBB3-214ENST00000550070 ANGEL1Q9UNK9 670 aaKnown RBP11.85□□□□□ -0.51
ERBB3-214ENST00000550070 KCPQ6ZWJ8 1503 aa11.85□□□□□ -0.51
ERBB3-214ENST00000550070 SERPINC1P01008 464 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 TUBB4AP04350 444 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 MCAMP43121 646 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 CLCN6P51797 869 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 METTL16Q86W50 562 aaKnown RBP11.84□□□□□ -0.51
ERBB3-214ENST00000550070 REXO1L1PQ8IX06 675 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms