RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 XAGE2Q96GT9 111 aa28.14■■■□□ 2.09
CHD4-214ENST00000545942 OTOFQ9HC10 1997 aa28.13■■■□□ 2.09
CHD4-214ENST00000545942 PNMA6EA0A0J9YXQ4 647 aa28.13■■■□□ 2.09
CHD4-214ENST00000545942 RGS19P49795 217 aa28.13■■■□□ 2.09
CHD4-214ENST00000545942 RASGRF1Q13972 1273 aa28.13■■■□□ 2.09
CHD4-214ENST00000545942 CDC42EP5Q6NZY7 148 aa28.13■■■□□ 2.09
CHD4-214ENST00000545942 PDS5AQ29RF7 1337 aaKnown RBP28.12■■■□□ 2.09
CHD4-214ENST00000545942 LAMB1P07942 1786 aa28.12■■■□□ 2.09
CHD4-214ENST00000545942 TESPA1A2RU30 521 aaPredicted RBP28.12■■■□□ 2.09
CHD4-214ENST00000545942 FAM151AQ8WW52 585 aa28.12■■■□□ 2.09
CHD4-214ENST00000545942 G3BP1Q13283 466 aaKnown RBP eCLIP28.11■■■□□ 2.093e-7■■■□□ 15.7
CHD4-214ENST00000545942 DCAF15Q66K64 600 aa28.11■■■□□ 2.09
CHD4-214ENST00000545942 FTSJ3Q8IY81 847 aaKnown RBP28.11■■■□□ 2.09
CHD4-214ENST00000545942 WRNIP1Q96S55 665 aa28.11■■■□□ 2.09
CHD4-214ENST00000545942 CNKSR2Q8WXI2 1034 aa28.1■■■□□ 2.09
CHD4-214ENST00000545942 MS4A4AQ96JQ5 239 aa28.1■■■□□ 2.09
CHD4-214ENST00000545942 NEUROD6Q96NK8 337 aa28.1■■■□□ 2.09
CHD4-214ENST00000545942 PTPN18Q99952 460 aa28.1■■■□□ 2.09
CHD4-214ENST00000545942 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.1■■■□□ 2.09
CHD4-214ENST00000545942 ZBED9Q6R2W3 1325 aa28.09■■■□□ 2.09
CHD4-214ENST00000545942 OTUD5Q96G74 571 aa28.09■■■□□ 2.09
CHD4-214ENST00000545942 USP40Q9NVE5 1235 aa28.09■■■□□ 2.09
CHD4-214ENST00000545942 ABCF2Q9UG63 623 aa28.09■■■□□ 2.09
CHD4-214ENST00000545942 GTF2A2P52657 109 aa28.08■■■□□ 2.09
CHD4-214ENST00000545942 MLLT1Q03111 559 aaPredicted RBP28.08■■■□□ 2.09
CHD4-214ENST00000545942 TCP10Q12799 353 aa28.08■■■□□ 2.09
CHD4-214ENST00000545942 NFIAQ12857 509 aa28.08■■■□□ 2.09
CHD4-214ENST00000545942 SPTY2D1Q68D10 685 aaPredicted RBP28.08■■■□□ 2.09
CHD4-214ENST00000545942 DZIP1Q86YF9 867 aaKnown RBP28.08■■■□□ 2.09
CHD4-214ENST00000545942 ZNF341Q9BYN7 854 aa28.08■■■□□ 2.09
CHD4-214ENST00000545942 SNCAIPQ9Y6H5 919 aa28.08■■■□□ 2.09
CHD4-214ENST00000545942 SPDYE5A6NIY4 337 aa28.07■■■□□ 2.08
CHD4-214ENST00000545942 CRHR2Q13324 411 aa28.07■■■□□ 2.08
CHD4-214ENST00000545942 GORABQ5T7V8 394 aa28.07■■■□□ 2.08
CHD4-214ENST00000545942 MIGA2Q7L4E1 593 aa28.07■■■□□ 2.08
CHD4-214ENST00000545942 SLF2Q8IX21 1173 aa28.07■■■□□ 2.08
CHD4-214ENST00000545942 HPS5Q9UPZ3 1129 aa28.07■■■□□ 2.08
CHD4-214ENST00000545942 GAKO14976 1311 aa28.07■■■□□ 2.08
CHD4-214ENST00000545942 ERO1BQ86YB8 467 aa28.06■■■□□ 2.08
CHD4-214ENST00000545942 ZKSCAN4Q969J2 545 aaPredicted RBP28.06■■■□□ 2.08
CHD4-214ENST00000545942 FAM198AQ9UFP1 575 aa28.06■■■□□ 2.08
CHD4-214ENST00000545942 CCL15-CCL14A0A0B4J2E2 113 aa28.05■■■□□ 2.08
CHD4-214ENST00000545942 POLA2Q14181 598 aa28.05■■■□□ 2.08
CHD4-214ENST00000545942 CCL15Q16663 113 aa28.05■■■□□ 2.08
CHD4-214ENST00000545942 ITPRIPQ8IWB1 547 aa28.05■■■□□ 2.08
CHD4-214ENST00000545942 BRI3BPQ8WY22 251 aa28.05■■■□□ 2.08
CHD4-214ENST00000545942 FBXO46Q6PJ61 603 aaPredicted RBP28.04■■■□□ 2.08
CHD4-214ENST00000545942 ATP8B2P98198 1209 aa28.03■■■□□ 2.08
CHD4-214ENST00000545942 ERICH6Q7L0X2 663 aa28.03■■■□□ 2.08
CHD4-214ENST00000545942 SSH3Q8TE77 659 aa28.03■■■□□ 2.08
CHD4-214ENST00000545942 FAM163AQ96GL9 167 aaPredicted RBP28.03■■■□□ 2.08
CHD4-214ENST00000545942 IDI2Q9BXS1 227 aa28.03■■■□□ 2.08
CHD4-214ENST00000545942 HMG20BQ9P0W2 317 aa28.03■■■□□ 2.08
CHD4-214ENST00000545942 RLBP1P12271 317 aa28.02■■■□□ 2.08
CHD4-214ENST00000545942 ARID4AP29374 1257 aaPredicted RBP28.02■■■□□ 2.08
CHD4-214ENST00000545942 SPATA5Q8NB90 893 aa28.02■■■□□ 2.08
CHD4-214ENST00000545942 ZBTB7BO15156 539 aaPredicted RBP28.01■■■□□ 2.07
CHD4-214ENST00000545942 ERO1AQ96HE7 468 aa28.01■■■□□ 2.07
CHD4-214ENST00000545942 C1orf115Q9H7X2 142 aa28.01■■■□□ 2.07
CHD4-214ENST00000545942 ZNF112Q9UJU3 913 aa28.01■■■□□ 2.07
CHD4-214ENST00000545942 IRF6O14896 467 aa28■■■□□ 2.07
CHD4-214ENST00000545942 ENTPD3O75355 529 aa28■■■□□ 2.07
CHD4-214ENST00000545942 CETPP11597 493 aa28■■■□□ 2.07
CHD4-214ENST00000545942 INPP5BP32019 993 aa28■■■□□ 2.07
CHD4-214ENST00000545942 SOX10P56693 466 aa28■■■□□ 2.07
CHD4-214ENST00000545942 MECOMQ03112 1051 aa28■■■□□ 2.07
CHD4-214ENST00000545942 PPIL2Q13356 520 aa28■■■□□ 2.07
CHD4-214ENST00000545942 OS9Q13438 667 aaPredicted RBP28■■■□□ 2.07
CHD4-214ENST00000545942 SNAPC2Q13487 334 aa28■■■□□ 2.07
CHD4-214ENST00000545942 GPR108Q9NPR9 543 aa28■■■□□ 2.07
CHD4-214ENST00000545942 TRIM17Q9Y577 477 aa28■■■□□ 2.07
CHD4-214ENST00000545942 MROH7-TTC4A0A0A0MT08 1334 aa28■■■□□ 2.07
CHD4-214ENST00000545942 BTDP43251 543 aa27.99■■■□□ 2.07
CHD4-214ENST00000545942 RGS3P49796 1198 aa27.99■■■□□ 2.07
CHD4-214ENST00000545942 PPATQ06203 517 aa27.99■■■□□ 2.07
CHD4-214ENST00000545942 TAF1CQ15572 869 aaPredicted RBP27.99■■■□□ 2.07
CHD4-214ENST00000545942 PI16Q6UXB8 463 aa27.99■■■□□ 2.07
CHD4-214ENST00000545942 ZFPM1Q8IX07 1006 aa27.99■■■□□ 2.07
CHD4-214ENST00000545942 FAM43AQ8N2R8 423 aa27.99■■■□□ 2.07
CHD4-214ENST00000545942 ZFYVE28Q9HCC9 887 aa27.99■■■□□ 2.07
CHD4-214ENST00000545942 SURF6O75683 361 aaKnown RBP27.98■■■□□ 2.07
CHD4-214ENST00000545942 UQCRFS1P1P0C7P4 283 aa27.98■■■□□ 2.07
CHD4-214ENST00000545942 SP3Q02447 781 aa27.98■■■□□ 2.07
CHD4-214ENST00000545942 OTOP1Q7RTM1 612 aa27.98■■■□□ 2.07
CHD4-214ENST00000545942 RFX7Q2KHR2 1363 aa27.98■■■□□ 2.07
CHD4-214ENST00000545942 TNNI3KQ59H18 835 aa27.97■■■□□ 2.07
CHD4-214ENST00000545942 FPGT-TNNI3KV9GXZ4 949 aa27.97■■■□□ 2.07
CHD4-214ENST00000545942 MYH2Q9UKX2 1941 aa27.97■■■□□ 2.07
CHD4-214ENST00000545942 GPR75-ASB3A0A0A6YYF3 556 aa27.96■■■□□ 2.07
CHD4-214ENST00000545942 WDHD1O75717 1129 aaPredicted RBP27.96■■■□□ 2.07
CHD4-214ENST00000545942 MCAMP43121 646 aa27.96■■■□□ 2.07
CHD4-214ENST00000545942 GSTO1P78417 241 aa27.96■■■□□ 2.07
CHD4-214ENST00000545942 NOL9Q5SY16 702 aaKnown RBP27.96■■■□□ 2.07
CHD4-214ENST00000545942 TBC1D9Q6ZT07 1266 aa27.96■■■□□ 2.07
CHD4-214ENST00000545942 CD99L2Q8TCZ2 262 aa27.96■■■□□ 2.07
CHD4-214ENST00000545942 ZNF384Q8TF68 577 aa27.96■■■□□ 2.07
CHD4-214ENST00000545942 ZCCHC17Q9NP64 241 aaKnown RBP27.96■■■□□ 2.07
CHD4-214ENST00000545942 LDHCP07864 332 aa27.95■■■□□ 2.07
CHD4-214ENST00000545942 ZSCAN29Q8IWY8 852 aaPredicted RBP27.95■■■□□ 2.07
CHD4-214ENST00000545942 NSUN4Q96CB9 384 aaKnown RBP27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms