RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 CAPN2P17655 700 aa19.81■□□□□ 0.76
CLSTN3-216ENST00000545663 MDM2Q00987 491 aaPredicted RBP19.81■□□□□ 0.76
CLSTN3-216ENST00000545663 CDX2Q99626 313 aaPredicted RBP19.81■□□□□ 0.76
CLSTN3-216ENST00000545663 NBPF3Q9H094 633 aa19.81■□□□□ 0.76
CLSTN3-216ENST00000545663 MBIPQ9NS73 344 aa19.81■□□□□ 0.76
CLSTN3-216ENST00000545663 KCNH4Q9UQ05 1017 aa19.81■□□□□ 0.76
CLSTN3-216ENST00000545663 MYH3P11055 1940 aa19.8■□□□□ 0.76
CLSTN3-216ENST00000545663 FAM205AQ6ZU69 1335 aa19.8■□□□□ 0.76
CLSTN3-216ENST00000545663 MGAMO43451 1857 aa19.8■□□□□ 0.76
CLSTN3-216ENST00000545663 MAFAQ8NHW3 353 aaPredicted RBP19.8■□□□□ 0.76
CLSTN3-216ENST00000545663 PI4KAP2A4QPH2 592 aa19.79■□□□□ 0.76
CLSTN3-216ENST00000545663 CSF1RP07333 972 aa19.79■□□□□ 0.76
CLSTN3-216ENST00000545663 IRF5Q13568 498 aa19.79■□□□□ 0.76
CLSTN3-216ENST00000545663 PI4KAP1Q8N8J0 262 aa19.79■□□□□ 0.76
CLSTN3-216ENST00000545663 PARK7Q99497 189 aaKnown RBP19.79■□□□□ 0.76
CLSTN3-216ENST00000545663 C11orf49Q9H6J7 331 aa19.79■□□□□ 0.76
CLSTN3-216ENST00000545663 NEURL1BA8MQ27 555 aa19.78■□□□□ 0.76
CLSTN3-216ENST00000545663 TNPO2O14787 897 aaKnown RBP19.78■□□□□ 0.76
CLSTN3-216ENST00000545663 PLIN1O60240 522 aa19.78■□□□□ 0.76
CLSTN3-216ENST00000545663 DDX58O95786 925 aaKnown RBP19.78■□□□□ 0.76
CLSTN3-216ENST00000545663 ANKLE1Q8NAG6 615 aa19.78■□□□□ 0.76
CLSTN3-216ENST00000545663 TRIM32Q13049 653 aa19.77■□□□□ 0.76
CLSTN3-216ENST00000545663 KSR2Q6VAB6 950 aa19.77■□□□□ 0.76
CLSTN3-216ENST00000545663 TDRD7Q8NHU6 1098 aaKnown RBP19.76■□□□□ 0.75
CLSTN3-216ENST00000545663 ZNF341Q9BYN7 854 aa19.76■□□□□ 0.75
CLSTN3-216ENST00000545663 PFASO15067 1338 aa19.76■□□□□ 0.75
CLSTN3-216ENST00000545663 PLA2G5P39877 138 aa19.75■□□□□ 0.75
CLSTN3-216ENST00000545663 GYG1P46976 350 aa19.75■□□□□ 0.75
CLSTN3-216ENST00000545663 C8orf58Q8NAV2 365 aa19.75■□□□□ 0.75
CLSTN3-216ENST00000545663 PLA2G12BQ9BX93 195 aa19.75■□□□□ 0.75
CLSTN3-216ENST00000545663 ANKRD18BA2A2Z9 1011 aa19.74■□□□□ 0.75
CLSTN3-216ENST00000545663 CASP7P55210 303 aa19.74■□□□□ 0.75
CLSTN3-216ENST00000545663 ZNF697Q5TEC3 545 aa19.74■□□□□ 0.75
CLSTN3-216ENST00000545663 DCAF15Q66K64 600 aa19.74■□□□□ 0.75
CLSTN3-216ENST00000545663 MYLIPQ8WY64 445 aa19.74■□□□□ 0.75
CLSTN3-216ENST00000545663 DDX60LQ5H9U9 1706 aaKnown RBP19.73■□□□□ 0.75
CLSTN3-216ENST00000545663 COL2A1P02458 1487 aaPredicted RBP19.73■□□□□ 0.75
CLSTN3-216ENST00000545663 NEXNQ0ZGT2 675 aa19.73■□□□□ 0.75
CLSTN3-216ENST00000545663 FAM83AQ86UY5 434 aa19.73■□□□□ 0.75
CLSTN3-216ENST00000545663 SYMPKQ92797 1274 aaKnown RBP19.73■□□□□ 0.75
CLSTN3-216ENST00000545663 SEMA6BQ9H3T3 888 aa19.73■□□□□ 0.75
CLSTN3-216ENST00000545663 ZNF112Q9UJU3 913 aa19.73■□□□□ 0.75
CLSTN3-216ENST00000545663 TNFRSF10AO00220 468 aa19.72■□□□□ 0.75
CLSTN3-216ENST00000545663 GCKRQ14397 625 aa19.72■□□□□ 0.75
CLSTN3-216ENST00000545663 ZNF594Q96JF6 807 aaPredicted RBP19.72■□□□□ 0.75
CLSTN3-216ENST00000545663 ZNF853P0CG23 659 aa19.71■□□□□ 0.75
CLSTN3-216ENST00000545663 LRRC26Q2I0M4 334 aa19.71■□□□□ 0.75
CLSTN3-216ENST00000545663 FAM122AQ96E09 287 aa19.71■□□□□ 0.75
CLSTN3-216ENST00000545663 HOOK2Q96ED9 719 aa19.71■□□□□ 0.75
CLSTN3-216ENST00000545663 FAM84BQ96KN1 310 aaPredicted RBP19.71■□□□□ 0.75
CLSTN3-216ENST00000545663 OGDHLQ9ULD0 1010 aa19.71■□□□□ 0.75
CLSTN3-216ENST00000545663 IQSEC3Q9UPP2 1182 aaPredicted RBP19.71■□□□□ 0.75
CLSTN3-216ENST00000545663 DOCK3Q8IZD9 2030 aa19.7■□□□□ 0.74
CLSTN3-216ENST00000545663 CXCL11O14625 94 aa19.7■□□□□ 0.74
CLSTN3-216ENST00000545663 HIBADHP31937 336 aaKnown RBP19.7■□□□□ 0.74
CLSTN3-216ENST00000545663 APOBEC3HQ6NTF7 200 aaKnown RBP19.7■□□□□ 0.74
CLSTN3-216ENST00000545663 COA7Q96BR5 231 aa19.7■□□□□ 0.74
CLSTN3-216ENST00000545663 HMX1Q9NP08 348 aaPredicted RBP19.7■□□□□ 0.74
CLSTN3-216ENST00000545663 A0A1B0GUL6 1792 aa19.7■□□□□ 0.74
CLSTN3-216ENST00000545663 HMGCRP04035 888 aa19.69■□□□□ 0.74
CLSTN3-216ENST00000545663 GADL1Q6ZQY3 521 aa19.69■□□□□ 0.74
CLSTN3-216ENST00000545663 ANKRD13CQ8N6S4 541 aa19.69■□□□□ 0.74
CLSTN3-216ENST00000545663 TEKT1Q969V4 418 aa19.69■□□□□ 0.74
CLSTN3-216ENST00000545663 TMOD2Q9NZR1 351 aa19.69■□□□□ 0.74
CLSTN3-216ENST00000545663 FOXO4P98177 505 aa19.68■□□□□ 0.74
CLSTN3-216ENST00000545663 CHAF1AQ13111 956 aaPredicted RBP19.68■□□□□ 0.74
CLSTN3-216ENST00000545663 IFIT5Q13325 482 aaKnown RBP19.68■□□□□ 0.74
CLSTN3-216ENST00000545663 CCDC30Q5VVM6 783 aa19.68■□□□□ 0.74
CLSTN3-216ENST00000545663 G2E3Q7L622 706 aa19.68■□□□□ 0.74
CLSTN3-216ENST00000545663 ZDHHC15Q96MV8 337 aa19.68■□□□□ 0.74
CLSTN3-216ENST00000545663 TTYH1Q9H313 450 aaPredicted RBP19.68■□□□□ 0.74
CLSTN3-216ENST00000545663 CHMP3Q9Y3E7 222 aa19.68■□□□□ 0.74
CLSTN3-216ENST00000545663 BDP1A6H8Y1 2624 aa19.68■□□□□ 0.74
CLSTN3-216ENST00000545663 TMEM265A0A087WTH1 108 aa19.67■□□□□ 0.74
CLSTN3-216ENST00000545663 A0A0G2JLL6 359 aaPredicted RBP19.67■□□□□ 0.74
CLSTN3-216ENST00000545663 COL6A1P12109 1028 aa19.67■□□□□ 0.74
CLSTN3-216ENST00000545663 HDLBPQ00341 1268 aaKnown RBP19.67■□□□□ 0.74
CLSTN3-216ENST00000545663 TCP10Q12799 353 aa19.67■□□□□ 0.74
CLSTN3-216ENST00000545663 NOL9Q5SY16 702 aaKnown RBP19.67■□□□□ 0.74
CLSTN3-216ENST00000545663 FKBP1CQ5VVH2 108 aa19.67■□□□□ 0.74
CLSTN3-216ENST00000545663 PRRT2Q7Z6L0 340 aaPredicted RBP19.67■□□□□ 0.74
CLSTN3-216ENST00000545663 SMCR8Q8TEV9 937 aaPredicted RBP19.67■□□□□ 0.74
CLSTN3-216ENST00000545663 ZHX2Q9Y6X8 837 aa19.67■□□□□ 0.74
CLSTN3-216ENST00000545663 FASTKD5Q7L8L6 764 aaKnown RBP19.66■□□□□ 0.74
CLSTN3-216ENST00000545663 TSPYL6Q8N831 410 aa19.66■□□□□ 0.74
CLSTN3-216ENST00000545663 GJD2Q9UKL4 321 aa19.66■□□□□ 0.74
CLSTN3-216ENST00000545663 FOSL2P15408 326 aa19.65■□□□□ 0.74
CLSTN3-216ENST00000545663 HOXD11P31277 338 aaPredicted RBP19.65■□□□□ 0.74
CLSTN3-216ENST00000545663 TJAP1Q5JTD0 557 aa19.65■□□□□ 0.74
CLSTN3-216ENST00000545663 LDHAL6AQ6ZMR3 332 aa19.65■□□□□ 0.74
CLSTN3-216ENST00000545663 RUNDC1Q96C34 613 aa19.65■□□□□ 0.74
CLSTN3-216ENST00000545663 USP38Q8NB14 1042 aa19.64■□□□□ 0.73
CLSTN3-216ENST00000545663 FAM151AQ8WW52 585 aa19.64■□□□□ 0.73
CLSTN3-216ENST00000545663 TRIB2Q92519 343 aa19.64■□□□□ 0.73
CLSTN3-216ENST00000545663 CNNM1Q9NRU3 951 aa19.64■□□□□ 0.73
CLSTN3-216ENST00000545663 RPAP1Q9BWH6 1393 aaPredicted RBP19.64■□□□□ 0.73
CLSTN3-216ENST00000545663 SHHQ15465 462 aa19.63■□□□□ 0.73
CLSTN3-216ENST00000545663 LBHD1Q9BQE6 289 aaPredicted RBP19.63■□□□□ 0.73
CLSTN3-216ENST00000545663 AFG3L2Q9Y4W6 797 aa19.63■□□□□ 0.73
CLSTN3-216ENST00000545663 PTPRAP18433 802 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms