RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TBC1D32Q96NH3 1257 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 MMRN2Q9H8L6 949 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 FAM135BQ49AJ0 1406 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 ANKARQ7Z5J8 1434 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 ADGBQ8N7X0 1667 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 USO1O60763 962 aaKnown RBP7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 ZBED4O75132 1171 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 AFMP43652 599 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 KCNA1Q09470 495 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 DCAF15Q66K64 600 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 CPXCR1Q8N123 301 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 CCDC112Q8NEF3 446 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 CPLX3Q8WVH0 158 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 ZBTB1Q9Y2K1 713 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 THRAP3Q9Y2W1 955 aaKnown RBP7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 RTL1A6NKG5 1358 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 PCCAP05165 728 aaPredicted RBP7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 ZSCAN22P10073 491 aaPredicted RBP7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 CTNNA2P26232 953 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 CHMLP26374 656 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 STX1AQ16623 288 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 HS2ST1Q7LGA3 356 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 KIAA0825Q8IV33 1275 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 PLEKHM2Q8IWE5 1019 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 KBTBD3Q8NAB2 608 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 DCPSQ96C86 337 aaKnown RBP7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 TMEM87BQ96K49 555 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 USP40Q9NVE5 1235 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 USP6P35125 1406 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 FAM13AO94988 1023 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 ZRANB2O95218 330 aaKnown RBP eCLIP7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 TSPY1Q01534 308 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 AFF2P51816 1311 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 SERPINB2P05120 415 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 CCDC172P0C7W6 258 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 TGFBRAP1Q8WUH2 860 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 TNPO1Q92973 898 aaKnown RBP7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 SPAG5Q96R06 1193 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 GLT8D2Q9H1C3 349 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 TMA7Q9Y2S6 64 aaKnown RBP7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 PSMA7O14818 248 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 ZSCAN12O43309 604 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 ERLIN1O75477 346 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 NSMFQ6X4W1 530 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 IBTKQ9P2D0 1353 aaPredicted RBP7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 NOP56O00567 594 aaKnown RBP7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 UBE2HP62256 183 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 DOK7Q18PE1 504 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 RRAGBQ5VZM2 374 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 SYNCQ9H7C4 482 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 PKD2L1Q9P0L9 805 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 PPME1Q9Y570 386 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 PTPDC1A2A3K4 754 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 MARCKSP29966 332 aaPredicted RBP7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 ZAP70P43403 619 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 ISM2Q6H9L7 571 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 DTHD1Q6ZMT9 781 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 AS3MTQ9HBK9 375 aa7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 ATF5Q9Y2D1 282 aaPredicted RBP7.82□□□□□ -1.16
SRGAP1-206ENST00000543397 AATKQ6ZMQ8 1374 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 MAFGO15525 162 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 CCDC129Q6ZRS4 1044 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 RGS22Q8NE09 1264 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 CTNNBL1Q8WYA6 563 aaPredicted RBP7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 MRPS27Q92552 414 aaKnown RBP7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 GOPCQ9HD26 462 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 SPATA31A3Q5VYP0 1347 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 TMCO5BA8MYB1 307 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 N4BP3O15049 544 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 MCM7P33993 719 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 GIGYF2Q6Y7W6 1299 aaKnown RBP7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 TMC4Q7Z404 712 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 ZNF532Q9HCE3 1301 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 ZNF165P49910 485 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 LETM2Q2VYF4 491 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 ATP7BP35670 1465 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 KIF5CO60282 957 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 CAVIN2O95810 425 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 GYG1P46976 350 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 BIRC2Q13490 618 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 ZNF771Q7L3S4 317 aaPredicted RBP7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 FAM212AQ96EL1 285 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 CENPHQ9H3R5 247 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 PNMA6EA0A0J9YXQ4 647 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 KCNQ4P56696 695 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 KIF22Q14807 665 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 RUFY3Q7L099 469 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 TTC16Q8NEE8 873 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 FERMT1Q9BQL6 677 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 SLC5A4Q9NY91 659 aa7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 ANGEL1Q9UNK9 670 aaKnown RBP7.81□□□□□ -1.16
SRGAP1-206ENST00000543397 IGSF1Q8N6C5 1336 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 PPEF1O14829 653 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 SPTLC2O15270 562 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 GBP2P32456 591 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 DNA2P51530 1060 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 AK2P54819 239 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 TAF12Q16514 161 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 RPAINQ86UA6 219 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms