RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 FMNL1O95466 1100 aaPredicted RBP15.36■□□□□ 0.05
SNHG1-216ENST00000541416 PSMC4P43686 418 aa15.36■□□□□ 0.05
SNHG1-216ENST00000541416 BCAMP50895 628 aa15.36■□□□□ 0.05
SNHG1-216ENST00000541416 GRIK5Q16478 980 aa15.36■□□□□ 0.05
SNHG1-216ENST00000541416 LRRC24Q50LG9 513 aa15.36■□□□□ 0.05
SNHG1-216ENST00000541416 C17orf99Q6UX52 265 aa15.36■□□□□ 0.05
SNHG1-216ENST00000541416 FAM151AQ8WW52 585 aa15.36■□□□□ 0.05
SNHG1-216ENST00000541416 ARHGAP39Q9C0H5 1083 aa15.36■□□□□ 0.05
SNHG1-216ENST00000541416 PDHXO00330 501 aa15.35■□□□□ 0.05
SNHG1-216ENST00000541416 SLC5A1P13866 664 aa15.35■□□□□ 0.05
SNHG1-216ENST00000541416 MIGA2Q7L4E1 593 aa15.35■□□□□ 0.05
SNHG1-216ENST00000541416 VGLL2Q8N8G2 317 aa15.35■□□□□ 0.05
SNHG1-216ENST00000541416 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.35■□□□□ 0.05
SNHG1-216ENST00000541416 DPF3Q92784 378 aa15.35■□□□□ 0.05
SNHG1-216ENST00000541416 TRIM47Q96LD4 638 aa15.35■□□□□ 0.05
SNHG1-216ENST00000541416 PARK7Q99497 189 aaKnown RBP15.35■□□□□ 0.05
SNHG1-216ENST00000541416 SRRDQ9UH36 339 aa15.35■□□□□ 0.05
SNHG1-216ENST00000541416 PTPRCP08575 1304 aa15.35■□□□□ 0.05
SNHG1-216ENST00000541416 H0YGN5 161 aa15.34■□□□□ 0.05
SNHG1-216ENST00000541416 GRK4P32298 578 aa15.34■□□□□ 0.05
SNHG1-216ENST00000541416 UBXN2AP68543 259 aa15.34■□□□□ 0.05
SNHG1-216ENST00000541416 HTATIP2Q9BUP3 242 aa15.34■□□□□ 0.05
SNHG1-216ENST00000541416 GNL3LQ9NVN8 582 aaKnown RBP15.34■□□□□ 0.05
SNHG1-216ENST00000541416 BIN2Q9UBW5 565 aaPredicted RBP15.34■□□□□ 0.05
SNHG1-216ENST00000541416 CPA4Q9UI42 421 aa15.34■□□□□ 0.05
SNHG1-216ENST00000541416 AK9Q5TCS8 1911 aa15.34■□□□□ 0.05
SNHG1-216ENST00000541416 MYH13Q9UKX3 1938 aa15.33■□□□□ 0.05
SNHG1-216ENST00000541416 ANKRD44Q8N8A2 993 aa15.33■□□□□ 0.04
SNHG1-216ENST00000541416 LPIN2Q92539 896 aa15.33■□□□□ 0.04
SNHG1-216ENST00000541416 SPINK5Q9NQ38 1064 aaPredicted RBP15.33■□□□□ 0.04
SNHG1-216ENST00000541416 KCNH4Q9UQ05 1017 aa15.33■□□□□ 0.04
SNHG1-216ENST00000541416 MYPNQ86TC9 1320 aa15.33■□□□□ 0.04
SNHG1-216ENST00000541416 CAPN2P17655 700 aa15.32■□□□□ 0.04
SNHG1-216ENST00000541416 OSBPP22059 807 aa15.32■□□□□ 0.04
SNHG1-216ENST00000541416 INPP5BP32019 993 aa15.32■□□□□ 0.04
SNHG1-216ENST00000541416 FCGRTP55899 365 aa15.32■□□□□ 0.04
SNHG1-216ENST00000541416 TCP10Q12799 353 aa15.32■□□□□ 0.04
SNHG1-216ENST00000541416 ZNF112Q9UJU3 913 aa15.32■□□□□ 0.04
SNHG1-216ENST00000541416 CXCL11O14625 94 aa15.31■□□□□ 0.04
SNHG1-216ENST00000541416 ECM2O94769 699 aaPredicted RBP15.31■□□□□ 0.04
SNHG1-216ENST00000541416 LDHBP07195 334 aaKnown RBP15.31■□□□□ 0.04
SNHG1-216ENST00000541416 GJB1P08034 283 aa15.31■□□□□ 0.04
SNHG1-216ENST00000541416 FGFR2P21802 821 aa15.31■□□□□ 0.04
SNHG1-216ENST00000541416 NOL9Q5SY16 702 aaKnown RBP15.31■□□□□ 0.04
SNHG1-216ENST00000541416 FASTKD5Q7L8L6 764 aaKnown RBP15.31■□□□□ 0.04
SNHG1-216ENST00000541416 SLAIN1Q8ND83 568 aa15.31■□□□□ 0.04
SNHG1-216ENST00000541416 RNF208Q9H0X6 261 aa15.31■□□□□ 0.04
SNHG1-216ENST00000541416 NR2E3Q9Y5X4 410 aa15.31■□□□□ 0.04
SNHG1-216ENST00000541416 ZSWIM8A7E2V4 1837 aa15.3■□□□□ 0.04
SNHG1-216ENST00000541416 EYA2O00167 538 aa15.3■□□□□ 0.04
SNHG1-216ENST00000541416 GJA8P48165 433 aa15.3■□□□□ 0.04
SNHG1-216ENST00000541416 MTFR1Q15390 333 aa15.3■□□□□ 0.04
SNHG1-216ENST00000541416 CDC42EP5Q6NZY7 148 aa15.3■□□□□ 0.04
SNHG1-216ENST00000541416 CHRDL2Q6WN34 429 aa15.3■□□□□ 0.04
SNHG1-216ENST00000541416 ZGPATQ8N5A5 531 aaKnown RBP15.3■□□□□ 0.04
SNHG1-216ENST00000541416 KLHDC4Q8TBB5 520 aa15.3■□□□□ 0.04
SNHG1-216ENST00000541416 PICK1Q9NRD5 415 aa15.3■□□□□ 0.04
SNHG1-216ENST00000541416 FBXO3Q9UK99 471 aa15.3■□□□□ 0.04
SNHG1-216ENST00000541416 HDAC5Q9UQL6 1122 aa15.3■□□□□ 0.04
SNHG1-216ENST00000541416 DAGLAQ9Y4D2 1042 aa15.3■□□□□ 0.04
SNHG1-216ENST00000541416 SEMA3EO15041 775 aa15.29■□□□□ 0.04
SNHG1-216ENST00000541416 CCL5P13501 91 aa15.29■□□□□ 0.04
SNHG1-216ENST00000541416 SLF2Q8IX21 1173 aa15.29■□□□□ 0.04
SNHG1-216ENST00000541416 FAM9BQ8IZU0 186 aa15.29■□□□□ 0.04
SNHG1-216ENST00000541416 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
SNHG1-216ENST00000541416 USP40Q9NVE5 1235 aa15.29■□□□□ 0.04
SNHG1-216ENST00000541416 DENND2AQ9ULE3 1009 aa15.29■□□□□ 0.04
SNHG1-216ENST00000541416 ADGRA2Q96PE1 1338 aa15.28■□□□□ 0.04
SNHG1-216ENST00000541416 SHISA4Q96DD7 197 aa15.28■□□□□ 0.04
SNHG1-216ENST00000541416 USP44Q9H0E7 712 aa15.28■□□□□ 0.04
SNHG1-216ENST00000541416 CEP126Q9P2H0 1117 aa15.28■□□□□ 0.04
SNHG1-216ENST00000541416 CEP290O15078 2479 aa15.28■□□□□ 0.04
SNHG1-216ENST00000541416 SALL1Q9NSC2 1324 aa15.27■□□□□ 0.04
SNHG1-216ENST00000541416 DIXDC1Q155Q3 683 aa15.27■□□□□ 0.04
SNHG1-216ENST00000541416 ATP2B3Q16720 1220 aa15.27■□□□□ 0.04
SNHG1-216ENST00000541416 ZSCAN29Q8IWY8 852 aaPredicted RBP15.27■□□□□ 0.04
SNHG1-216ENST00000541416 SCYL3Q8IZE3 742 aa15.27■□□□□ 0.04
SNHG1-216ENST00000541416 SMCR8Q8TEV9 937 aaPredicted RBP15.27■□□□□ 0.04
SNHG1-216ENST00000541416 SLC45A1Q9Y2W3 748 aa15.27■□□□□ 0.04
SNHG1-216ENST00000541416 LRRFIP2Q9Y608 721 aaKnown RBP15.27■□□□□ 0.04
SNHG1-216ENST00000541416 ZHX2Q9Y6X8 837 aa15.27■□□□□ 0.04
SNHG1-216ENST00000541416 ENTPD3O75355 529 aa15.26■□□□□ 0.03
SNHG1-216ENST00000541416 CIAO1O76071 339 aa15.26■□□□□ 0.03
SNHG1-216ENST00000541416 FARP2O94887 1054 aaPredicted RBP15.26■□□□□ 0.03
SNHG1-216ENST00000541416 BCRP11274 1271 aa15.26■□□□□ 0.03
SNHG1-216ENST00000541416 CTGFP29279 349 aa15.26■□□□□ 0.03
SNHG1-216ENST00000541416 PRDX5P30044 214 aa15.26■□□□□ 0.03
SNHG1-216ENST00000541416 PRKCZQ05513 592 aa15.26■□□□□ 0.03
SNHG1-216ENST00000541416 NFIAQ12857 509 aa15.26■□□□□ 0.03
SNHG1-216ENST00000541416 DZIP1Q86YF9 867 aaKnown RBP15.26■□□□□ 0.03
SNHG1-216ENST00000541416 FAM198AQ9UFP1 575 aa15.26■□□□□ 0.03
SNHG1-216ENST00000541416 A0A0G2JLL6 359 aaPredicted RBP15.25■□□□□ 0.03
SNHG1-216ENST00000541416 E9PSI1 815 aa15.25■□□□□ 0.03
SNHG1-216ENST00000541416 UBTFL1P0CB47 393 aaPredicted RBP15.25■□□□□ 0.03
SNHG1-216ENST00000541416 CYP2C8P10632 490 aa15.25■□□□□ 0.03
SNHG1-216ENST00000541416 MOGSQ13724 837 aa15.25■□□□□ 0.03
SNHG1-216ENST00000541416 GPAT2Q6NUI2 795 aa15.25■□□□□ 0.03
SNHG1-216ENST00000541416 GADL1Q6ZQY3 521 aa15.25■□□□□ 0.03
SNHG1-216ENST00000541416 PRRT2Q7Z6L0 340 aaPredicted RBP15.25■□□□□ 0.03
SNHG1-216ENST00000541416 PXYLP1Q8TE99 480 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms