RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 DIXDC1Q155Q3 683 aa14.87□□□□□ -0.03
SMAD3-204ENST00000540846 GPR162Q16538 588 aa14.87□□□□□ -0.03
SMAD3-204ENST00000540846 TSGA10IPQ3SY00 556 aa14.87□□□□□ -0.03
SMAD3-204ENST00000540846 RSBN1LQ6PCB5 846 aaPredicted RBP14.87□□□□□ -0.03
SMAD3-204ENST00000540846 FBXW7Q969H0 707 aa14.87□□□□□ -0.03
SMAD3-204ENST00000540846 ZSWIM6Q9HCJ5 1215 aa14.87□□□□□ -0.03
SMAD3-204ENST00000540846 FOXD4L1Q9NU39 408 aa14.87□□□□□ -0.03
SMAD3-204ENST00000540846 GAKO14976 1311 aa14.87□□□□□ -0.03
SMAD3-204ENST00000540846 CASTP20810 708 aaKnown RBP14.86□□□□□ -0.03
SMAD3-204ENST00000540846 CYP7A1P22680 504 aa14.86□□□□□ -0.03
SMAD3-204ENST00000540846 RAB3GAP1Q15042 981 aa14.86□□□□□ -0.03
SMAD3-204ENST00000540846 NAA16Q6N069 864 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-204ENST00000540846 CCDC129Q6ZRS4 1044 aa14.86□□□□□ -0.03
SMAD3-204ENST00000540846 DZIP1Q86YF9 867 aaKnown RBP14.86□□□□□ -0.03
SMAD3-204ENST00000540846 FAM163AQ96GL9 167 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-204ENST00000540846 JAKMIP1Q96N16 626 aaKnown RBP14.86□□□□□ -0.03
SMAD3-204ENST00000540846 RIOK1Q9BRS2 568 aaKnown RBP14.86□□□□□ -0.03
SMAD3-204ENST00000540846 DSCC1Q9BVC3 393 aa14.86□□□□□ -0.03
SMAD3-204ENST00000540846 CWC22Q9HCG8 908 aaKnown RBP14.86□□□□□ -0.03
SMAD3-204ENST00000540846 MROH7-TTC4A0A0A0MT08 1334 aa14.86□□□□□ -0.03
SMAD3-204ENST00000540846 MYO3BQ8WXR4 1341 aa14.86□□□□□ -0.03
SMAD3-204ENST00000540846 GRIN3BO60391 1043 aa14.85□□□□□ -0.03
SMAD3-204ENST00000540846 ADCK5Q3MIX3 580 aa14.85□□□□□ -0.03
SMAD3-204ENST00000540846 CIAPIN1Q6FI81 312 aa14.85□□□□□ -0.03
SMAD3-204ENST00000540846 INTS4Q96HW7 963 aaKnown RBP14.85□□□□□ -0.03
SMAD3-204ENST00000540846 PSMA5P28066 241 aa14.85□□□□□ -0.03
SMAD3-204ENST00000540846 VPS53Q5VIR6 699 aa14.85□□□□□ -0.03
SMAD3-204ENST00000540846 KIAA0825Q8IV33 1275 aa14.85□□□□□ -0.03
SMAD3-204ENST00000540846 RNF181Q9P0P0 153 aa14.85□□□□□ -0.03
SMAD3-204ENST00000540846 TTF2Q9UNY4 1162 aaKnown RBP14.85□□□□□ -0.03
SMAD3-204ENST00000540846 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
SMAD3-204ENST00000540846 CYP46A1Q9Y6A2 500 aa14.85□□□□□ -0.03
SMAD3-204ENST00000540846 BAZ2AQ9UIF9 1905 aaKnown RBP14.84□□□□□ -0.03
SMAD3-204ENST00000540846 GPAA1O43292 621 aa14.84□□□□□ -0.03
SMAD3-204ENST00000540846 AK2P54819 239 aa14.84□□□□□ -0.03
SMAD3-204ENST00000540846 KRT32Q14532 448 aa14.84□□□□□ -0.03
SMAD3-204ENST00000540846 C9orf131Q5VYM1 1079 aa14.84□□□□□ -0.03
SMAD3-204ENST00000540846 RUFY3Q7L099 469 aa14.84□□□□□ -0.03
SMAD3-204ENST00000540846 LCORLQ8N3X6 602 aa14.84□□□□□ -0.03
SMAD3-204ENST00000540846 MIGA1Q8NAN2 632 aa14.84□□□□□ -0.03
SMAD3-204ENST00000540846 AGBL3Q8NEM8 1001 aa14.84□□□□□ -0.03
SMAD3-204ENST00000540846 MRIQ9BWK5 157 aa14.84□□□□□ -0.03
SMAD3-204ENST00000540846 DAGLAQ9Y4D2 1042 aa14.84□□□□□ -0.03
SMAD3-204ENST00000540846 NAV1Q8NEY1 1877 aa14.84□□□□□ -0.03
SMAD3-204ENST00000540846 F8W031 263 aaPredicted RBP14.83□□□□□ -0.04
SMAD3-204ENST00000540846 MBD4O95243 580 aa14.83□□□□□ -0.04
SMAD3-204ENST00000540846 SCNN1DP51172 638 aa14.83□□□□□ -0.04
SMAD3-204ENST00000540846 GSTO1P78417 241 aa14.83□□□□□ -0.04
SMAD3-204ENST00000540846 HDLBPQ00341 1268 aaKnown RBP14.83□□□□□ -0.04
SMAD3-204ENST00000540846 TNIP1Q15025 636 aa14.83□□□□□ -0.04
SMAD3-204ENST00000540846 STRBPQ96SI9 672 aaKnown RBP14.83□□□□□ -0.04
SMAD3-204ENST00000540846 TAF6LQ9Y6J9 622 aa14.83□□□□□ -0.04
SMAD3-204ENST00000540846 LAMB1P07942 1786 aa14.83□□□□□ -0.04
SMAD3-204ENST00000540846 GPR75-ASB3A0A0A6YYF3 556 aa14.82□□□□□ -0.04
SMAD3-204ENST00000540846 EIF6P56537 245 aaKnown RBP14.82□□□□□ -0.04
SMAD3-204ENST00000540846 PPP4CP60510 307 aa14.82□□□□□ -0.04
SMAD3-204ENST00000540846 DYNLL1P63167 89 aaKnown RBP14.82□□□□□ -0.04
SMAD3-204ENST00000540846 NUCB2P80303 420 aa14.82□□□□□ -0.04
SMAD3-204ENST00000540846 HHIPL2Q6UWX4 724 aa14.82□□□□□ -0.04
SMAD3-204ENST00000540846 ALDH8A1Q9H2A2 487 aaPredicted RBP14.82□□□□□ -0.04
SMAD3-204ENST00000540846 ARMT1Q9H993 441 aa14.82□□□□□ -0.04
SMAD3-204ENST00000540846 PDRG1Q9NUG6 133 aa14.82□□□□□ -0.04
SMAD3-204ENST00000540846 PCDHAC2Q9Y5I4 1007 aa14.82□□□□□ -0.04
SMAD3-204ENST00000540846 SHTN1A0MZ66 631 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 CYP21A2P08686 494 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 HSPD1P10809 573 aaKnown RBP14.81□□□□□ -0.04
SMAD3-204ENST00000540846 CPA1P15085 419 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 RPS12P25398 132 aaKnown RBP14.81□□□□□ -0.04
SMAD3-204ENST00000540846 CRKP46108 304 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 RHBDL3P58872 404 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 BLOC1S2Q6QNY1 142 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 TNPO1Q92973 898 aaKnown RBP14.81□□□□□ -0.04
SMAD3-204ENST00000540846 ZDHHC15Q96MV8 337 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 AATFQ9NY61 560 aaKnown RBP eCLIP14.81□□□□□ -0.04
SMAD3-204ENST00000540846 SERPINA10Q9UK55 444 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 LIMCH1Q9UPQ0 1083 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 ZC3H4Q9UPT8 1303 aaKnown RBP14.81□□□□□ -0.04
SMAD3-204ENST00000540846 MAGEB6P1A0A0J9YX57 407 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 LDHCP07864 332 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 MCM4P33991 863 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 APOBEC3HQ6NTF7 200 aaKnown RBP14.81□□□□□ -0.04
SMAD3-204ENST00000540846 CLEC17AQ6ZS10 378 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 NOL8Q76FK4 1167 aaKnown RBP14.81□□□□□ -0.04
SMAD3-204ENST00000540846 GPC2Q8N158 579 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 TEKT1Q969V4 418 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 AIDAQ96BJ3 306 aa14.81□□□□□ -0.04
SMAD3-204ENST00000540846 ZBED3Q96IU2 234 aaPredicted RBP14.81□□□□□ -0.04
SMAD3-204ENST00000540846 EPB41L4AQ9HCS5 686 aaPredicted RBP14.81□□□□□ -0.04
SMAD3-204ENST00000540846 MYH1P12882 1939 aa14.8□□□□□ -0.04
SMAD3-204ENST00000540846 PRKAB2O43741 272 aa14.8□□□□□ -0.04
SMAD3-204ENST00000540846 RPS6KB1P23443 525 aa14.8□□□□□ -0.04
SMAD3-204ENST00000540846 BTDP43251 543 aa14.8□□□□□ -0.04
SMAD3-204ENST00000540846 GMPSP49915 693 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-204ENST00000540846 ZNF280AP59817 542 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-204ENST00000540846 SLF2Q8IX21 1173 aa14.8□□□□□ -0.04
SMAD3-204ENST00000540846 DPF2Q92785 391 aa14.8□□□□□ -0.04
SMAD3-204ENST00000540846 GSG1L2A8MUP6 293 aa14.79□□□□□ -0.04
SMAD3-204ENST00000540846 USP17L8P0C7I0 530 aa14.79□□□□□ -0.04
SMAD3-204ENST00000540846 MTMR14Q8NCE2 650 aa14.79□□□□□ -0.04
SMAD3-204ENST00000540846 SH3RF3Q8TEJ3 882 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms