RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
TMEM258-203ENST00000535297 REM2Q8IYK8 340 aaPredicted RBP16.95■□□□□ 0.3
TMEM258-203ENST00000535297 ZNF512BQ96KM6 892 aaPredicted RBP16.95■□□□□ 0.3
TMEM258-203ENST00000535297 TMEM39BQ9GZU3 492 aa16.95■□□□□ 0.3
TMEM258-203ENST00000535297 PRDM10Q9NQV6 1147 aa16.95■□□□□ 0.3
TMEM258-203ENST00000535297 DBNLQ9UJU6 430 aaKnown RBP16.95■□□□□ 0.3
TMEM258-203ENST00000535297 IREB2P48200 963 aaKnown RBP16.94■□□□□ 0.3
TMEM258-203ENST00000535297 PI16Q6UXB8 463 aa16.94■□□□□ 0.3
TMEM258-203ENST00000535297 SIRT2Q8IXJ6 389 aa16.94■□□□□ 0.3
TMEM258-203ENST00000535297 LAMB1P07942 1786 aa16.93■□□□□ 0.3
TMEM258-203ENST00000535297 COL13A1Q5TAT6 717 aaPredicted RBP16.93■□□□□ 0.3
TMEM258-203ENST00000535297 CDC42EP5Q6NZY7 148 aa16.93■□□□□ 0.3
TMEM258-203ENST00000535297 CDAN1Q8IWY9 1227 aa16.93■□□□□ 0.3
TMEM258-203ENST00000535297 EAF2Q96CJ1 260 aaPredicted RBP16.93■□□□□ 0.3
TMEM258-203ENST00000535297 HOOK2Q96ED9 719 aa16.93■□□□□ 0.3
TMEM258-203ENST00000535297 FAM163AQ96GL9 167 aaPredicted RBP16.93■□□□□ 0.3
TMEM258-203ENST00000535297 FZD1Q9UP38 647 aa16.93■□□□□ 0.3
TMEM258-203ENST00000535297 MROH7-TTC4A0A0A0MT08 1334 aa16.93■□□□□ 0.3
TMEM258-203ENST00000535297 LBX1P52954 281 aa16.92■□□□□ 0.3
TMEM258-203ENST00000535297 RRP1P56182 461 aaKnown RBP16.92■□□□□ 0.3
TMEM258-203ENST00000535297 GSTO1P78417 241 aa16.92■□□□□ 0.3
TMEM258-203ENST00000535297 MECOMQ03112 1051 aa16.92■□□□□ 0.3
TMEM258-203ENST00000535297 RHPN1Q8TCX5 695 aa16.92■□□□□ 0.3
TMEM258-203ENST00000535297 KIF1BPQ96EK5 621 aa16.92■□□□□ 0.3
TMEM258-203ENST00000535297 CCDC8Q9H0W5 538 aaPredicted RBP16.92■□□□□ 0.3
TMEM258-203ENST00000535297 USP40Q9NVE5 1235 aa16.92■□□□□ 0.3
TMEM258-203ENST00000535297 TLR7Q9NYK1 1049 aaKnown RBP16.92■□□□□ 0.3
TMEM258-203ENST00000535297 RFX7Q2KHR2 1363 aa16.91■□□□□ 0.3
TMEM258-203ENST00000535297 IGSF3O75054 1194 aa16.91■□□□□ 0.3
TMEM258-203ENST00000535297 RAB11FIP3O75154 756 aa16.91■□□□□ 0.3
TMEM258-203ENST00000535297 USP2O75604 605 aaPredicted RBP16.91■□□□□ 0.3
TMEM258-203ENST00000535297 AACSQ86V21 672 aa16.91■□□□□ 0.3
TMEM258-203ENST00000535297 ANKRD13AQ8IZ07 590 aa16.91■□□□□ 0.3
TMEM258-203ENST00000535297 FAM151AQ8WW52 585 aa16.91■□□□□ 0.3
TMEM258-203ENST00000535297 NSUN4Q96CB9 384 aaKnown RBP16.91■□□□□ 0.3
TMEM258-203ENST00000535297 SAGE1Q9NXZ1 904 aa16.91■□□□□ 0.3
TMEM258-203ENST00000535297 LDHCP07864 332 aa16.9■□□□□ 0.3
TMEM258-203ENST00000535297 BTDP43251 543 aa16.9■□□□□ 0.3
TMEM258-203ENST00000535297 SPRYD7Q5W111 196 aa16.9■□□□□ 0.3
TMEM258-203ENST00000535297 TBC1D9Q6ZT07 1266 aa16.9■□□□□ 0.3
TMEM258-203ENST00000535297 ZNF384Q8TF68 577 aa16.9■□□□□ 0.3
TMEM258-203ENST00000535297 SLC10A4Q96EP9 437 aa16.9■□□□□ 0.3
TMEM258-203ENST00000535297 CSRNP1Q96S65 589 aa16.9■□□□□ 0.3
TMEM258-203ENST00000535297 IDI2Q9BXS1 227 aa16.9■□□□□ 0.3
TMEM258-203ENST00000535297 IL1RAPL2Q9NP60 686 aa16.9■□□□□ 0.3
TMEM258-203ENST00000535297 RAI14Q9P0K7 980 aa16.9■□□□□ 0.3
TMEM258-203ENST00000535297 LRP2BPQ9P2M1 347 aa16.9■□□□□ 0.3
TMEM258-203ENST00000535297 DOCK2Q92608 1830 aa16.9■□□□□ 0.3
TMEM258-203ENST00000535297 GPR75-ASB3A0A0A6YYF3 556 aa16.89■□□□□ 0.29
TMEM258-203ENST00000535297 ZBTB48P10074 688 aaPredicted RBP16.89■□□□□ 0.29
TMEM258-203ENST00000535297 NFIAQ12857 509 aa16.89■□□□□ 0.29
TMEM258-203ENST00000535297 DCAF15Q66K64 600 aa16.89■□□□□ 0.29
TMEM258-203ENST00000535297 CLASRPQ8N2M8 674 aaKnown RBP16.89■□□□□ 0.29
TMEM258-203ENST00000535297 CLMNQ96JQ2 1002 aa16.89■□□□□ 0.29
TMEM258-203ENST00000535297 SNRKQ9NRH2 765 aa16.89■□□□□ 0.29
TMEM258-203ENST00000535297 FAM198AQ9UFP1 575 aa16.89■□□□□ 0.29
TMEM258-203ENST00000535297 AK9Q5TCS8 1911 aa16.89■□□□□ 0.29
TMEM258-203ENST00000535297 MYO5AQ9Y4I1 1855 aaKnown RBP16.88■□□□□ 0.29
TMEM258-203ENST00000535297 ENTPD3O75355 529 aa16.88■□□□□ 0.29
TMEM258-203ENST00000535297 MAP4K4O95819 1239 aaPredicted RBP16.88■□□□□ 0.29
TMEM258-203ENST00000535297 CYP2E1P05181 493 aaPredicted RBP16.88■□□□□ 0.29
TMEM258-203ENST00000535297 SREBF2Q12772 1141 aa16.88■□□□□ 0.29
TMEM258-203ENST00000535297 TCP10Q12799 353 aa16.88■□□□□ 0.29
TMEM258-203ENST00000535297 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.88■□□□□ 0.291e-6■■■■■ 32.7
TMEM258-203ENST00000535297 WNK4Q96J92 1243 aa16.88■□□□□ 0.29
TMEM258-203ENST00000535297 TSKSQ9UJT2 592 aa16.88■□□□□ 0.29
TMEM258-203ENST00000535297 APBB1O00213 710 aa16.87■□□□□ 0.29
TMEM258-203ENST00000535297 ZAP70P43403 619 aa16.87■□□□□ 0.29
TMEM258-203ENST00000535297 MAP3K9P80192 1104 aa16.87■□□□□ 0.29
TMEM258-203ENST00000535297 MKRN3Q13064 507 aaKnown RBP16.87■□□□□ 0.29
TMEM258-203ENST00000535297 RNF186Q9NXI6 227 aa16.87■□□□□ 0.29
TMEM258-203ENST00000535297 MANSC4A6NHS7 340 aaPredicted RBP16.86■□□□□ 0.29
TMEM258-203ENST00000535297 WDHD1O75717 1129 aaPredicted RBP16.86■□□□□ 0.29
TMEM258-203ENST00000535297 IFIT2P09913 472 aaKnown RBP16.86■□□□□ 0.29
TMEM258-203ENST00000535297 TM4SF4P48230 202 aa16.86■□□□□ 0.29
TMEM258-203ENST00000535297 RGS3P49796 1198 aa16.86■□□□□ 0.29
TMEM258-203ENST00000535297 RHBDL3P58872 404 aa16.86■□□□□ 0.29
TMEM258-203ENST00000535297 VGLL4Q14135 290 aa16.86■□□□□ 0.29
TMEM258-203ENST00000535297 NAA16Q6N069 864 aaPredicted RBP16.86■□□□□ 0.29
TMEM258-203ENST00000535297 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.86■□□□□ 0.29
TMEM258-203ENST00000535297 TNS4Q8IZW8 715 aa16.86■□□□□ 0.29
TMEM258-203ENST00000535297 ZNF341Q9BYN7 854 aa16.86■□□□□ 0.29
TMEM258-203ENST00000535297 CSADQ9Y600 493 aa16.86■□□□□ 0.29
TMEM258-203ENST00000535297 NPM3O75607 178 aaKnown RBP16.85■□□□□ 0.29
TMEM258-203ENST00000535297 WRNIP1Q96S55 665 aa16.85■□□□□ 0.29
TMEM258-203ENST00000535297 NOL10Q9BSC4 688 aaKnown RBP16.85■□□□□ 0.29
TMEM258-203ENST00000535297 ELP3Q9H9T3 547 aa16.85■□□□□ 0.29
TMEM258-203ENST00000535297 PIH1D3Q9NQM4 214 aaKnown RBP16.85■□□□□ 0.29
TMEM258-203ENST00000535297 COL2A1P02458 1487 aaPredicted RBP16.85■□□□□ 0.29
TMEM258-203ENST00000535297 TRPA1O75762 1119 aa16.84■□□□□ 0.29
TMEM258-203ENST00000535297 INHBEP58166 350 aa16.84■□□□□ 0.29
TMEM258-203ENST00000535297 TMED8Q6PL24 325 aaPredicted RBP16.84■□□□□ 0.29
TMEM258-203ENST00000535297 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.84■□□□□ 0.29
TMEM258-203ENST00000535297 LRRCC1Q9C099 1032 aa16.84■□□□□ 0.29
TMEM258-203ENST00000535297 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.84■□□□□ 0.29
TMEM258-203ENST00000535297 ATRNL1Q5VV63 1379 aa16.84■□□□□ 0.29
TMEM258-203ENST00000535297 BAG3O95817 575 aa16.83■□□□□ 0.28
TMEM258-203ENST00000535297 PLCG2P16885 1265 aa16.83■□□□□ 0.28
TMEM258-203ENST00000535297 GJA5P36382 358 aa16.83■□□□□ 0.28
TMEM258-203ENST00000535297 PICALMQ13492 652 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms