RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 DHX32Q7L7V1 743 aaKnown RBP11.43□□□□□ -0.58
CHKA-207ENST00000533728 GAS2L3Q86XJ1 694 aa11.43□□□□□ -0.58
CHKA-207ENST00000533728 CCDC83Q8IWF9 413 aa11.43□□□□□ -0.58
CHKA-207ENST00000533728 APPBP2Q92624 585 aa11.43□□□□□ -0.58
CHKA-207ENST00000533728 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHKA-207ENST00000533728 TRMT112Q9UI30 125 aaKnown RBP11.43□□□□□ -0.58
CHKA-207ENST00000533728 TPCN1Q9ULQ1 816 aa11.43□□□□□ -0.58
CHKA-207ENST00000533728 MTMR6Q9Y217 621 aa11.43□□□□□ -0.58
CHKA-207ENST00000533728 STXBP5LQ9Y2K9 1186 aa11.43□□□□□ -0.58
CHKA-207ENST00000533728 ANKRD31Q8N7Z5 1873 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 MAST3O60307 1309 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 ZNF541Q9H0D2 1346 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 CYP21A2P08686 494 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 CPA1P15085 419 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 UBE2HP62256 183 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 CCDC173Q0VFZ6 552 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 ST3GAL1Q11201 340 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 GORABQ5T7V8 394 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 CAVIN1Q6NZI2 390 aaKnown RBP11.42□□□□□ -0.58
CHKA-207ENST00000533728 LRSAM1Q6UWE0 723 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 LDHAL6AQ6ZMR3 332 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 BICDL1Q6ZP65 573 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 GTF3C6Q969F1 213 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 NCOR1O75376 2440 aa11.42□□□□□ -0.58
CHKA-207ENST00000533728 ELP1O95163 1332 aa11.41□□□□□ -0.58
CHKA-207ENST00000533728 ZMYM6O95789 1325 aa11.41□□□□□ -0.58
CHKA-207ENST00000533728 C21orf2O43822 256 aa11.41□□□□□ -0.58
CHKA-207ENST00000533728 PDE8BO95263 885 aa11.41□□□□□ -0.58
CHKA-207ENST00000533728 HSPD1P10809 573 aaKnown RBP11.41□□□□□ -0.58
CHKA-207ENST00000533728 ARID4AP29374 1257 aaPredicted RBP11.41□□□□□ -0.58
CHKA-207ENST00000533728 EVCP57679 992 aa11.41□□□□□ -0.58
CHKA-207ENST00000533728 EXOSC10Q01780 885 aaKnown RBP11.41□□□□□ -0.58
CHKA-207ENST00000533728 METTL24Q5JXM2 366 aa11.41□□□□□ -0.58
CHKA-207ENST00000533728 CLEC4GQ6UXB4 293 aa11.41□□□□□ -0.58
CHKA-207ENST00000533728 SYNE4Q8N205 404 aa11.41□□□□□ -0.58
CHKA-207ENST00000533728 ANP32BQ92688 251 aaKnown RBP11.41□□□□□ -0.58
CHKA-207ENST00000533728 PPP1R9BQ96SB3 815 aa11.41□□□□□ -0.58
CHKA-207ENST00000533728 GREM2Q9H772 168 aa11.41□□□□□ -0.58
CHKA-207ENST00000533728 ZNF652Q9Y2D9 606 aa11.41□□□□□ -0.58
CHKA-207ENST00000533728 ZNF330Q9Y3S2 320 aaPredicted RBP11.41□□□□□ -0.58
CHKA-207ENST00000533728 KIF3AQ9Y496 699 aa11.41□□□□□ -0.58
CHKA-207ENST00000533728 UBN2Q6ZU65 1347 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 POLRMTO00411 1230 aaKnown RBP11.4□□□□□ -0.58
CHKA-207ENST00000533728 PFKFB2O60825 505 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 CAMTA2O94983 1202 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 FGFR2P21802 821 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 TM4SF1P30408 202 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 HMGN5P82970 282 aaKnown RBP11.4□□□□□ -0.58
CHKA-207ENST00000533728 UBE3CQ15386 1083 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 LARP1BQ659C4 914 aaKnown RBP11.4□□□□□ -0.58
CHKA-207ENST00000533728 USP48Q86UV5 1035 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 C2CD5Q86YS7 1000 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 SMARCC2Q8TAQ2 1214 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 LPIN2Q92539 896 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 ZNF274Q96GC6 653 aaPredicted RBP11.4□□□□□ -0.58
CHKA-207ENST00000533728 LRCH3Q96II8 777 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 SEC62Q99442 399 aaKnown RBP11.4□□□□□ -0.58
CHKA-207ENST00000533728 UTP14AQ9BVJ6 771 aaKnown RBP11.4□□□□□ -0.58
CHKA-207ENST00000533728 BCL2L12Q9HB09 334 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 CNNM1Q9NRU3 951 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 TMEM63CQ9P1W3 806 aa11.4□□□□□ -0.58
CHKA-207ENST00000533728 CARMIL3Q8ND23 1372 aa11.4□□□□□ -0.59
CHKA-207ENST00000533728 SOX1O00570 391 aaPredicted RBP11.39□□□□□ -0.59
CHKA-207ENST00000533728 ZBTB22O15209 634 aa11.39□□□□□ -0.59
CHKA-207ENST00000533728 GPTP24298 496 aa11.39□□□□□ -0.59
CHKA-207ENST00000533728 ADORA1P30542 326 aa11.39□□□□□ -0.59
CHKA-207ENST00000533728 NASPP49321 788 aaPredicted RBP11.39□□□□□ -0.59
CHKA-207ENST00000533728 CACNA1SQ13698 1873 aa11.39□□□□□ -0.59
CHKA-207ENST00000533728 PUM3Q15397 648 aaKnown RBP11.39□□□□□ -0.59
CHKA-207ENST00000533728 HS1BP3Q53T59 392 aa11.39□□□□□ -0.59
CHKA-207ENST00000533728 ATL3Q6DD88 541 aa11.39□□□□□ -0.59
CHKA-207ENST00000533728 CCDC129Q6ZRS4 1044 aa11.39□□□□□ -0.59
CHKA-207ENST00000533728 Q6ZUG5 572 aa11.39□□□□□ -0.59
CHKA-207ENST00000533728 FAM184AQ8NB25 1140 aa11.39□□□□□ -0.59
CHKA-207ENST00000533728 PRUNE2Q8WUY3 3088 aa11.39□□□□□ -0.59
CHKA-207ENST00000533728 PKD1L2Q7Z442 2459 aa11.38□□□□□ -0.59
CHKA-207ENST00000533728 H0YIN7 160 aa11.38□□□□□ -0.59
CHKA-207ENST00000533728 SLC5A1P13866 664 aa11.38□□□□□ -0.59
CHKA-207ENST00000533728 EN2P19622 333 aaPredicted RBP11.38□□□□□ -0.59
CHKA-207ENST00000533728 ADD2P35612 726 aa11.38□□□□□ -0.59
CHKA-207ENST00000533728 KRT85P78386 507 aa11.38□□□□□ -0.59
CHKA-207ENST00000533728 KIF23Q02241 960 aaPredicted RBP11.38□□□□□ -0.59
CHKA-207ENST00000533728 ALX1Q15699 326 aa11.38□□□□□ -0.59
CHKA-207ENST00000533728 IMMTQ16891 758 aaKnown RBP11.38□□□□□ -0.59
CHKA-207ENST00000533728 CCDC152Q4G0S7 254 aa11.38□□□□□ -0.59
CHKA-207ENST00000533728 CCDC183Q5T5S1 534 aa11.38□□□□□ -0.59
CHKA-207ENST00000533728 OSBP2Q969R2 916 aa11.38□□□□□ -0.59
CHKA-207ENST00000533728 SCAND2PQ9GZW5 306 aaPredicted RBP11.38□□□□□ -0.59
CHKA-207ENST00000533728 ZSCAN16Q9H4T2 348 aaPredicted RBP11.38□□□□□ -0.59
CHKA-207ENST00000533728 MAST2Q6P0Q8 1798 aa11.38□□□□□ -0.59
CHKA-207ENST00000533728 ECM29Q5VYK3 1845 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 E7EWF7 191 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 M0R2C6 588 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 NTSR2O95665 410 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 MCAMP43121 646 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 ZAP70P43403 619 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 FKBP4Q02790 459 aaKnown RBP eCLIP11.37□□□□□ -0.59
CHKA-207ENST00000533728 UVSSAQ2YD98 709 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 FOXD4L5Q5VV16 416 aaPredicted RBP11.37□□□□□ -0.59
CHKA-207ENST00000533728 NAA16Q6N069 864 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms