RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 CTU1Q7Z7A3 348 aaKnown RBP11.71□□□□□ -0.53
SF3B2-204ENST00000525207 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.71□□□□□ -0.53
SF3B2-204ENST00000525207 ZNF296Q8WUU4 475 aaPredicted RBP11.71□□□□□ -0.53
SF3B2-204ENST00000525207 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.71□□□□□ -0.53
SF3B2-204ENST00000525207 IGF2BP3O00425 579 aaKnown RBP eCLIP11.7□□□□□ -0.54
SF3B2-204ENST00000525207 ALDH1A1P00352 501 aa11.7□□□□□ -0.54
SF3B2-204ENST00000525207 LDHBP07195 334 aaKnown RBP11.7□□□□□ -0.54
SF3B2-204ENST00000525207 TFCP2Q12800 502 aa11.7□□□□□ -0.54
SF3B2-204ENST00000525207 VGLL4Q14135 290 aa11.7□□□□□ -0.54
SF3B2-204ENST00000525207 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.7□□□□□ -0.54
SF3B2-204ENST00000525207 IFNL1Q8IU54 200 aa11.7□□□□□ -0.54
SF3B2-204ENST00000525207 FTSJ3Q8IY81 847 aaKnown RBP11.7□□□□□ -0.54
SF3B2-204ENST00000525207 ZGPATQ8N5A5 531 aaKnown RBP11.7□□□□□ -0.54
SF3B2-204ENST00000525207 ELP3Q9H9T3 547 aa11.7□□□□□ -0.54
SF3B2-204ENST00000525207 AKAP2Q9Y2D5 859 aa11.7□□□□□ -0.54
SF3B2-204ENST00000525207 GAKO14976 1311 aa11.69□□□□□ -0.54
SF3B2-204ENST00000525207 CCDC85CA6NKD9 419 aa11.69□□□□□ -0.54
SF3B2-204ENST00000525207 GPR25O00155 361 aa11.69□□□□□ -0.54
SF3B2-204ENST00000525207 ATXN8OSP0DMR3 200 aa11.69□□□□□ -0.54
SF3B2-204ENST00000525207 RLBP1P12271 317 aa11.69□□□□□ -0.54
SF3B2-204ENST00000525207 INHBEP58166 350 aa11.69□□□□□ -0.54
SF3B2-204ENST00000525207 MVPQ14764 893 aaKnown RBP11.69□□□□□ -0.54
SF3B2-204ENST00000525207 OPTNQ96CV9 577 aa11.69□□□□□ -0.54
SF3B2-204ENST00000525207 XAGE2Q96GT9 111 aa11.69□□□□□ -0.54
SF3B2-204ENST00000525207 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.69□□□□□ -0.54
SF3B2-204ENST00000525207 DOCK1Q14185 1865 aa11.69□□□□□ -0.54
SF3B2-204ENST00000525207 SPDYE5A6NIY4 337 aa11.68□□□□□ -0.54
SF3B2-204ENST00000525207 TIMM10P62072 90 aa11.68□□□□□ -0.54
SF3B2-204ENST00000525207 NFIAQ12857 509 aa11.68□□□□□ -0.54
SF3B2-204ENST00000525207 POLA2Q14181 598 aa11.68□□□□□ -0.54
SF3B2-204ENST00000525207 CDC42EP5Q6NZY7 148 aa11.68□□□□□ -0.54
SF3B2-204ENST00000525207 ITPRIPQ8IWB1 547 aa11.68□□□□□ -0.54
SF3B2-204ENST00000525207 HOOK2Q96ED9 719 aa11.68□□□□□ -0.54
SF3B2-204ENST00000525207 WRNIP1Q96S55 665 aa11.68□□□□□ -0.54
SF3B2-204ENST00000525207 R3HDMLQ9H3Y0 253 aa11.68□□□□□ -0.54
SF3B2-204ENST00000525207 CSADQ9Y600 493 aa11.68□□□□□ -0.54
SF3B2-204ENST00000525207 SNCAIPQ9Y6H5 919 aa11.68□□□□□ -0.54
SF3B2-204ENST00000525207 PTPRFP10586 1907 aa11.68□□□□□ -0.54
SF3B2-204ENST00000525207 CDK5RAP2Q96SN8 1893 aa11.68□□□□□ -0.54
SF3B2-204ENST00000525207 MYO5AQ9Y4I1 1855 aaKnown RBP11.68□□□□□ -0.54
SF3B2-204ENST00000525207 ATRNL1Q5VV63 1379 aa11.67□□□□□ -0.54
SF3B2-204ENST00000525207 FOCADQ5VW36 1801 aa11.67□□□□□ -0.54
SF3B2-204ENST00000525207 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
SF3B2-204ENST00000525207 ARID4AP29374 1257 aaPredicted RBP11.67□□□□□ -0.54
SF3B2-204ENST00000525207 MAP3K9P80192 1104 aa11.67□□□□□ -0.54
SF3B2-204ENST00000525207 DCAF15Q66K64 600 aa11.67□□□□□ -0.54
SF3B2-204ENST00000525207 DZIP1Q86YF9 867 aaKnown RBP11.67□□□□□ -0.54
SF3B2-204ENST00000525207 SSH3Q8TE77 659 aa11.67□□□□□ -0.54
SF3B2-204ENST00000525207 FAM151AQ8WW52 585 aa11.67□□□□□ -0.54
SF3B2-204ENST00000525207 MS4A4AQ96JQ5 239 aa11.67□□□□□ -0.54
SF3B2-204ENST00000525207 C1orf115Q9H7X2 142 aa11.67□□□□□ -0.54
SF3B2-204ENST00000525207 FAM198AQ9UFP1 575 aa11.67□□□□□ -0.54
SF3B2-204ENST00000525207 MROH7-TTC4A0A0A0MT08 1334 aa11.66□□□□□ -0.54
SF3B2-204ENST00000525207 FKTNO75072 461 aa11.66□□□□□ -0.54
SF3B2-204ENST00000525207 G3BP1Q13283 466 aaKnown RBP eCLIP11.66□□□□□ -0.541e-6■□□□□ 10.4
SF3B2-204ENST00000525207 PI16Q6UXB8 463 aa11.66□□□□□ -0.54
SF3B2-204ENST00000525207 OTUD5Q96G74 571 aa11.66□□□□□ -0.54
SF3B2-204ENST00000525207 ABCF2Q9UG63 623 aa11.66□□□□□ -0.54
SF3B2-204ENST00000525207 ZSWIM8A7E2V4 1837 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 SIPA1L1O43166 1804 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 PHIPQ8WWQ0 1821 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 ATAD5Q96QE3 1844 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 HTTP42858 3142 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 COL2A1P02458 1487 aaPredicted RBP11.65□□□□□ -0.54
SF3B2-204ENST00000525207 RBBP6Q7Z6E9 1792 aaKnown RBP11.65□□□□□ -0.54
SF3B2-204ENST00000525207 MCAMP43121 646 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 RGS19P49795 217 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 GTF2A2P52657 109 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 TCP10Q12799 353 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 CRHR2Q13324 411 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 PKN2Q16513 984 aaKnown RBP11.65□□□□□ -0.54
SF3B2-204ENST00000525207 OTUD7BQ6GQQ9 843 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 ERO1BQ86YB8 467 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 ZNF384Q8TF68 577 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 BRI3BPQ8WY22 251 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 NEUROD6Q96NK8 337 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 PTPN18Q99952 460 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 IDI2Q9BXS1 227 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 ZNF341Q9BYN7 854 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 GPR108Q9NPR9 543 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 HMG20BQ9P0W2 317 aa11.65□□□□□ -0.54
SF3B2-204ENST00000525207 CCL15-CCL14A0A0B4J2E2 113 aa11.64□□□□□ -0.55
SF3B2-204ENST00000525207 ZBTB7BO15156 539 aaPredicted RBP11.64□□□□□ -0.55
SF3B2-204ENST00000525207 INPP5BP32019 993 aa11.64□□□□□ -0.55
SF3B2-204ENST00000525207 BTDP43251 543 aa11.64□□□□□ -0.55
SF3B2-204ENST00000525207 ATP8B2P98198 1209 aa11.64□□□□□ -0.55
SF3B2-204ENST00000525207 MECOMQ03112 1051 aa11.64□□□□□ -0.55
SF3B2-204ENST00000525207 CCL15Q16663 113 aa11.64□□□□□ -0.55
SF3B2-204ENST00000525207 TNNI3KQ59H18 835 aa11.64□□□□□ -0.55
SF3B2-204ENST00000525207 SPTY2D1Q68D10 685 aaPredicted RBP11.64□□□□□ -0.55
SF3B2-204ENST00000525207 FBXO46Q6PJ61 603 aaPredicted RBP11.64□□□□□ -0.55
SF3B2-204ENST00000525207 ERICH6Q7L0X2 663 aa11.64□□□□□ -0.55
SF3B2-204ENST00000525207 SLF2Q8IX21 1173 aa11.64□□□□□ -0.55
SF3B2-204ENST00000525207 SPATA5Q8NB90 893 aa11.64□□□□□ -0.55
SF3B2-204ENST00000525207 ZKSCAN4Q969J2 545 aaPredicted RBP11.64□□□□□ -0.55
SF3B2-204ENST00000525207 FAM163AQ96GL9 167 aaPredicted RBP11.64□□□□□ -0.55
SF3B2-204ENST00000525207 USP40Q9NVE5 1235 aa11.64□□□□□ -0.55
SF3B2-204ENST00000525207 HPS5Q9UPZ3 1129 aa11.64□□□□□ -0.55
SF3B2-204ENST00000525207 FPGT-TNNI3KV9GXZ4 949 aa11.64□□□□□ -0.55
SF3B2-204ENST00000525207 IRF6O14896 467 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms