RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 ADORA1P30542 326 aa18.85■□□□□ 0.61
CSMD1-207ENST00000520451 SP3Q02447 781 aa18.85■□□□□ 0.61
CSMD1-207ENST00000520451 TAF1CQ15572 869 aaPredicted RBP18.85■□□□□ 0.61
CSMD1-207ENST00000520451 INTS3Q68E01 1043 aaKnown RBP18.85■□□□□ 0.61
CSMD1-207ENST00000520451 CDC42EP5Q6NZY7 148 aa18.85■□□□□ 0.61
CSMD1-207ENST00000520451 ERO1BQ86YB8 467 aa18.85■□□□□ 0.61
CSMD1-207ENST00000520451 ARHGAP45Q92619 1136 aa18.85■□□□□ 0.61
CSMD1-207ENST00000520451 ZKSCAN4Q969J2 545 aaPredicted RBP18.85■□□□□ 0.61
CSMD1-207ENST00000520451 SALL1Q9NSC2 1324 aa18.84■□□□□ 0.61
CSMD1-207ENST00000520451 GNAI3P08754 354 aa18.84■□□□□ 0.61
CSMD1-207ENST00000520451 TCP10Q12799 353 aa18.84■□□□□ 0.61
CSMD1-207ENST00000520451 MIGA2Q7L4E1 593 aa18.84■□□□□ 0.61
CSMD1-207ENST00000520451 FAM43AQ8N2R8 423 aa18.84■□□□□ 0.61
CSMD1-207ENST00000520451 FAM151AQ8WW52 585 aa18.84■□□□□ 0.61
CSMD1-207ENST00000520451 ZNF341Q9BYN7 854 aa18.84■□□□□ 0.61
CSMD1-207ENST00000520451 EFCC1Q9HA90 598 aa18.84■□□□□ 0.61
CSMD1-207ENST00000520451 ZFYVE28Q9HCC9 887 aa18.84■□□□□ 0.61
CSMD1-207ENST00000520451 SRGAP3O43295 1099 aa18.83■□□□□ 0.6
CSMD1-207ENST00000520451 CETPP11597 493 aa18.83■□□□□ 0.6
CSMD1-207ENST00000520451 NFIAQ12857 509 aa18.83■□□□□ 0.6
CSMD1-207ENST00000520451 CCDC102BQ68D86 513 aa18.83■□□□□ 0.6
CSMD1-207ENST00000520451 PTPN22Q9Y2R2 807 aa18.83■□□□□ 0.6
CSMD1-207ENST00000520451 PPIL2Q13356 520 aa18.82■□□□□ 0.6
CSMD1-207ENST00000520451 SNAPC2Q13487 334 aa18.82■□□□□ 0.6
CSMD1-207ENST00000520451 USP40Q9NVE5 1235 aa18.82■□□□□ 0.6
CSMD1-207ENST00000520451 CENPFP49454 3210 aa18.81■□□□□ 0.6
CSMD1-207ENST00000520451 IRF6O14896 467 aa18.81■□□□□ 0.6
CSMD1-207ENST00000520451 IPO8O15397 1037 aaKnown RBP18.81■□□□□ 0.6
CSMD1-207ENST00000520451 WDHD1O75717 1129 aaPredicted RBP18.81■□□□□ 0.6
CSMD1-207ENST00000520451 INPP5BP32019 993 aa18.81■□□□□ 0.6
CSMD1-207ENST00000520451 TIMM10P62072 90 aa18.81■□□□□ 0.6
CSMD1-207ENST00000520451 CAP1Q01518 475 aa18.81■□□□□ 0.6
CSMD1-207ENST00000520451 ZGPATQ8N5A5 531 aaKnown RBP18.81■□□□□ 0.6
CSMD1-207ENST00000520451 BTBD19C9JJ37 291 aa18.8■□□□□ 0.6
CSMD1-207ENST00000520451 TRIM27P14373 513 aa18.8■□□□□ 0.6
CSMD1-207ENST00000520451 TFCP2Q12800 502 aa18.8■□□□□ 0.6
CSMD1-207ENST00000520451 MTX1Q13505 466 aa18.8■□□□□ 0.6
CSMD1-207ENST00000520451 RASGRF1Q13972 1273 aa18.8■□□□□ 0.6
CSMD1-207ENST00000520451 DZIP1Q86YF9 867 aaKnown RBP18.8■□□□□ 0.6
CSMD1-207ENST00000520451 FRAT1Q92837 279 aaPredicted RBP18.8■□□□□ 0.6
CSMD1-207ENST00000520451 FAM198AQ9UFP1 575 aa18.8■□□□□ 0.6
CSMD1-207ENST00000520451 AKAP2Q9Y2D5 859 aa18.8■□□□□ 0.6
CSMD1-207ENST00000520451 A0A1B0GUL7 405 aa18.79■□□□□ 0.6
CSMD1-207ENST00000520451 ZBTB22O15209 634 aa18.79■□□□□ 0.6
CSMD1-207ENST00000520451 PPATQ06203 517 aa18.79■□□□□ 0.6
CSMD1-207ENST00000520451 ARHGEF6Q15052 776 aa18.79■□□□□ 0.6
CSMD1-207ENST00000520451 ATF7IPQ6VMQ6 1270 aa18.79■□□□□ 0.6
CSMD1-207ENST00000520451 XAGE2Q96GT9 111 aa18.79■□□□□ 0.6
CSMD1-207ENST00000520451 ZCCHC17Q9NP64 241 aaKnown RBP18.79■□□□□ 0.6
CSMD1-207ENST00000520451 ABCF2Q9UG63 623 aa18.79■□□□□ 0.6
CSMD1-207ENST00000520451 TNNQ9UQP3 1299 aa18.79■□□□□ 0.6
CSMD1-207ENST00000520451 PDS5AQ29RF7 1337 aaKnown RBP18.78■□□□□ 0.6
CSMD1-207ENST00000520451 BCAR3O75815 825 aa18.78■□□□□ 0.6
CSMD1-207ENST00000520451 MVPQ14764 893 aaKnown RBP18.78■□□□□ 0.6
CSMD1-207ENST00000520451 ZFPM1Q8IX07 1006 aa18.78■□□□□ 0.6
CSMD1-207ENST00000520451 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.78■□□□□ 0.6
CSMD1-207ENST00000520451 ZNF112Q9UJU3 913 aa18.78■□□□□ 0.6
CSMD1-207ENST00000520451 GAKO14976 1311 aa18.77■□□□□ 0.6
CSMD1-207ENST00000520451 TLR2O60603 784 aa18.77■□□□□ 0.6
CSMD1-207ENST00000520451 SLC34A2O95436 690 aa18.77■□□□□ 0.6
CSMD1-207ENST00000520451 GNAI2P04899 355 aa18.77■□□□□ 0.6
CSMD1-207ENST00000520451 RGS3P49796 1198 aa18.77■□□□□ 0.6
CSMD1-207ENST00000520451 SLF2Q8IX21 1173 aa18.77■□□□□ 0.6
CSMD1-207ENST00000520451 CLUAP1Q96AJ1 413 aa18.77■□□□□ 0.6
CSMD1-207ENST00000520451 ARMC5Q96C12 935 aa18.77■□□□□ 0.6
CSMD1-207ENST00000520451 POTEFA5A3E0 1075 aa18.76■□□□□ 0.59
CSMD1-207ENST00000520451 NOL9Q5SY16 702 aaKnown RBP18.76■□□□□ 0.59
CSMD1-207ENST00000520451 PRPF38BQ5VTL8 546 aaKnown RBP18.76■□□□□ 0.59
CSMD1-207ENST00000520451 SPTY2D1Q68D10 685 aaPredicted RBP18.76■□□□□ 0.59
CSMD1-207ENST00000520451 NEUROD6Q96NK8 337 aa18.76■□□□□ 0.59
CSMD1-207ENST00000520451 IDI2Q9BXS1 227 aa18.76■□□□□ 0.59
CSMD1-207ENST00000520451 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.76■□□□□ 0.59
CSMD1-207ENST00000520451 AK9Q5TCS8 1911 aa18.76■□□□□ 0.59
CSMD1-207ENST00000520451 ENTPD3O75355 529 aa18.75■□□□□ 0.59
CSMD1-207ENST00000520451 KIF22Q14807 665 aa18.75■□□□□ 0.59
CSMD1-207ENST00000520451 GORABQ5T7V8 394 aa18.75■□□□□ 0.59
CSMD1-207ENST00000520451 ZSCAN29Q8IWY8 852 aaPredicted RBP18.75■□□□□ 0.59
CSMD1-207ENST00000520451 KCNH4Q9UQ05 1017 aa18.75■□□□□ 0.59
CSMD1-207ENST00000520451 PTCH2Q9Y6C5 1203 aa18.75■□□□□ 0.59
CSMD1-207ENST00000520451 MYH2Q9UKX2 1941 aa18.74■□□□□ 0.59
CSMD1-207ENST00000520451 MKI67P46013 3256 aaKnown RBP18.74■□□□□ 0.59
CSMD1-207ENST00000520451 RFX7Q2KHR2 1363 aa18.74■□□□□ 0.59
CSMD1-207ENST00000520451 ATRNL1Q5VV63 1379 aa18.74■□□□□ 0.59
CSMD1-207ENST00000520451 PNMA6EA0A0J9YXQ4 647 aa18.74■□□□□ 0.59
CSMD1-207ENST00000520451 BTDP43251 543 aa18.74■□□□□ 0.59
CSMD1-207ENST00000520451 ERICH6Q7L0X2 663 aa18.74■□□□□ 0.59
CSMD1-207ENST00000520451 ANKRD23Q86SG2 305 aa18.74■□□□□ 0.59
CSMD1-207ENST00000520451 FAM163AQ96GL9 167 aaPredicted RBP18.74■□□□□ 0.59
CSMD1-207ENST00000520451 ARHGAP39Q9C0H5 1083 aa18.74■□□□□ 0.59
CSMD1-207ENST00000520451 BRCA2P51587 3418 aa18.74■□□□□ 0.59
CSMD1-207ENST00000520451 MROH7-TTC4A0A0A0MT08 1334 aa18.74■□□□□ 0.59
CSMD1-207ENST00000520451 PDHXO00330 501 aa18.73■□□□□ 0.59
CSMD1-207ENST00000520451 LACTBP83111 547 aaPredicted RBP18.73■□□□□ 0.59
CSMD1-207ENST00000520451 MECOMQ03112 1051 aa18.73■□□□□ 0.59
CSMD1-207ENST00000520451 G3BP1Q13283 466 aaKnown RBP eCLIP18.73■□□□□ 0.59
CSMD1-207ENST00000520451 SLC9C1Q4G0N8 1177 aa18.73■□□□□ 0.59
CSMD1-207ENST00000520451 HMG20BQ9P0W2 317 aa18.73■□□□□ 0.59
CSMD1-207ENST00000520451 PHF20L1A8MW92 1017 aa18.72■□□□□ 0.59
CSMD1-207ENST00000520451 PICALMQ13492 652 aa18.72■□□□□ 0.59
CSMD1-207ENST00000520451 ZKSCAN2Q63HK3 967 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms