RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 TMEM88BA6NKF7 163 aa27.43■■□□□ 1.98
SKP1-206ENST00000519321 OTUD7AQ8TE49 926 aaPredicted RBP27.43■■□□□ 1.98
SKP1-206ENST00000519321 ZNF384Q8TF68 577 aa27.43■■□□□ 1.98
SKP1-206ENST00000519321 CELF2O95319 508 aaKnown RBP27.42■■□□□ 1.98
SKP1-206ENST00000519321 BAG3O95817 575 aa27.42■■□□□ 1.98
SKP1-206ENST00000519321 BTDP43251 543 aa27.42■■□□□ 1.98
SKP1-206ENST00000519321 CDC42EP5Q6NZY7 148 aa27.42■■□□□ 1.98
SKP1-206ENST00000519321 CDCA5Q96FF9 252 aa27.42■■□□□ 1.98
SKP1-206ENST00000519321 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.42■■□□□ 1.98
SKP1-206ENST00000519321 CREBZFQ9NS37 354 aa27.42■■□□□ 1.98
SKP1-206ENST00000519321 USP40Q9NVE5 1235 aa27.42■■□□□ 1.98
SKP1-206ENST00000519321 STAP2Q9UGK3 403 aa27.42■■□□□ 1.98
SKP1-206ENST00000519321 NF2P35240 595 aa27.41■■□□□ 1.98
SKP1-206ENST00000519321 MYO5AQ9Y4I1 1855 aaKnown RBP27.4■■□□□ 1.98
SKP1-206ENST00000519321 TCP10L2B9ZVM9 353 aa27.4■■□□□ 1.98
SKP1-206ENST00000519321 PLCG2P16885 1265 aa27.4■■□□□ 1.98
SKP1-206ENST00000519321 PDE1AP54750 535 aa27.4■■□□□ 1.98
SKP1-206ENST00000519321 FMR1Q06787 632 aaKnown RBP eCLIP27.4■■□□□ 1.98
SKP1-206ENST00000519321 RASA3Q14644 834 aa27.4■■□□□ 1.98
SKP1-206ENST00000519321 TSHZ3Q63HK5 1081 aa27.4■■□□□ 1.98
SKP1-206ENST00000519321 FAM83AQ86UY5 434 aa27.4■■□□□ 1.98
SKP1-206ENST00000519321 CERS3Q8IU89 383 aa27.4■■□□□ 1.98
SKP1-206ENST00000519321 MAGEB6Q8N7X4 407 aa27.4■■□□□ 1.98
SKP1-206ENST00000519321 PI4K2BQ8TCG2 481 aa27.4■■□□□ 1.98
SKP1-206ENST00000519321 ZNF408Q9H9D4 720 aa27.4■■□□□ 1.98
SKP1-206ENST00000519321 CYP7A1P22680 504 aa27.39■■□□□ 1.98
SKP1-206ENST00000519321 ERICH6BQ5W0A0 696 aa27.39■■□□□ 1.98
SKP1-206ENST00000519321 ZSCAN25Q6NSZ9 544 aa27.39■■□□□ 1.98
SKP1-206ENST00000519321 SCAF8Q9UPN6 1271 aaKnown RBP27.39■■□□□ 1.98
SKP1-206ENST00000519321 PPP4CP60510 307 aa27.38■■□□□ 1.97
SKP1-206ENST00000519321 SUPT20HL1Q3ZLR7 823 aa27.38■■□□□ 1.97
SKP1-206ENST00000519321 SLC9C2Q5TAH2 1124 aa27.38■■□□□ 1.97
SKP1-206ENST00000519321 CST9Q5W186 159 aa27.38■■□□□ 1.97
SKP1-206ENST00000519321 EDC3Q96F86 508 aaKnown RBP27.38■■□□□ 1.97
SKP1-206ENST00000519321 LRRFIP1Q32MZ4 808 aaKnown RBP27.37■■□□□ 1.97
SKP1-206ENST00000519321 DLK2Q6UY11 383 aa27.37■■□□□ 1.97
SKP1-206ENST00000519321 C2orf69Q8N8R5 385 aa27.37■■□□□ 1.97
SKP1-206ENST00000519321 IDI2Q9BXS1 227 aa27.37■■□□□ 1.97
SKP1-206ENST00000519321 PDE6AP16499 860 aa27.36■■□□□ 1.97
SKP1-206ENST00000519321 CACNB3P54284 484 aa27.36■■□□□ 1.97
SKP1-206ENST00000519321 FKBP1BP68106 108 aa27.36■■□□□ 1.97
SKP1-206ENST00000519321 KBTBD3Q8NAB2 608 aa27.36■■□□□ 1.97
SKP1-206ENST00000519321 GBA2Q9HCG7 927 aaPredicted RBP27.36■■□□□ 1.97
SKP1-206ENST00000519321 RHBDL3P58872 404 aa27.35■■□□□ 1.97
SKP1-206ENST00000519321 CENPQQ7L2Z9 268 aaPredicted RBP27.35■■□□□ 1.97
SKP1-206ENST00000519321 FAM151AQ8WW52 585 aa27.35■■□□□ 1.97
SKP1-206ENST00000519321 AATFQ9NY61 560 aaKnown RBP eCLIP27.35■■□□□ 1.97
SKP1-206ENST00000519321 CNTNAP1P78357 1384 aa27.35■■□□□ 1.97
SKP1-206ENST00000519321 ENTPD3O75355 529 aa27.34■■□□□ 1.97
SKP1-206ENST00000519321 NPM3O75607 178 aaKnown RBP27.34■■□□□ 1.97
SKP1-206ENST00000519321 PRAMEF18Q5VWM3 479 aa27.34■■□□□ 1.97
SKP1-206ENST00000519321 ADGRA1Q86SQ6 560 aa27.34■■□□□ 1.97
SKP1-206ENST00000519321 HOOK2Q96ED9 719 aa27.34■■□□□ 1.97
SKP1-206ENST00000519321 OSBPL3Q9H4L5 887 aa27.34■■□□□ 1.97
SKP1-206ENST00000519321 ABT1Q9ULW3 272 aaKnown RBP27.34■■□□□ 1.97
SKP1-206ENST00000519321 RPAP1Q9BWH6 1393 aaPredicted RBP27.34■■□□□ 1.97
SKP1-206ENST00000519321 ADD2P35612 726 aa27.33■■□□□ 1.97
SKP1-206ENST00000519321 PLEKHM2Q8IWE5 1019 aa27.33■■□□□ 1.97
SKP1-206ENST00000519321 CCDC136Q96JN2 1154 aa27.33■■□□□ 1.97
SKP1-206ENST00000519321 TLL2Q9Y6L7 1015 aa27.33■■□□□ 1.97
SKP1-206ENST00000519321 ZNF532Q9HCE3 1301 aa27.33■■□□□ 1.97
SKP1-206ENST00000519321 NFIAQ12857 509 aa27.32■■□□□ 1.96
SKP1-206ENST00000519321 UBE3CQ15386 1083 aa27.32■■□□□ 1.96
SKP1-206ENST00000519321 TEX11Q8IYF3 940 aa27.32■■□□□ 1.96
SKP1-206ENST00000519321 TMEM39BQ9GZU3 492 aa27.32■■□□□ 1.96
SKP1-206ENST00000519321 PPP1R12BO60237 982 aaPredicted RBP27.31■■□□□ 1.96
SKP1-206ENST00000519321 WDHD1O75717 1129 aaPredicted RBP27.31■■□□□ 1.96
SKP1-206ENST00000519321 ZFYP08048 801 aaPredicted RBP27.31■■□□□ 1.96
SKP1-206ENST00000519321 RGS3P49796 1198 aa27.31■■□□□ 1.96
SKP1-206ENST00000519321 NBPF12Q5TAG4 269 aaPredicted RBP27.31■■□□□ 1.96
SKP1-206ENST00000519321 TEPSINQ96N21 525 aa27.31■■□□□ 1.96
SKP1-206ENST00000519321 FAM198AQ9UFP1 575 aa27.31■■□□□ 1.96
SKP1-206ENST00000519321 MYH7P12883 1935 aa27.31■■□□□ 1.96
SKP1-206ENST00000519321 RFX7Q2KHR2 1363 aa27.31■■□□□ 1.96
SKP1-206ENST00000519321 PAPPA2Q9BXP8 1791 aa27.3■■□□□ 1.96
SKP1-206ENST00000519321 TCRBV5S4A2TA0A5A2 114 aa27.3■■□□□ 1.96
SKP1-206ENST00000519321 TCP10Q12799 353 aa27.3■■□□□ 1.96
SKP1-206ENST00000519321 TTLL12Q14166 644 aaPredicted RBP27.3■■□□□ 1.96
SKP1-206ENST00000519321 ARMC9Q7Z3E5 817 aa27.3■■□□□ 1.96
SKP1-206ENST00000519321 SAPCD2Q86UD0 394 aa27.3■■□□□ 1.96
SKP1-206ENST00000519321 MIGA1Q8NAN2 632 aa27.3■■□□□ 1.96
SKP1-206ENST00000519321 SH3RF3Q8TEJ3 882 aaPredicted RBP27.3■■□□□ 1.96
SKP1-206ENST00000519321 EVI5LQ96CN4 794 aa27.3■■□□□ 1.96
SKP1-206ENST00000519321 MAGEB6P1A0A0J9YX57 407 aa27.29■■□□□ 1.96
SKP1-206ENST00000519321 TICAM2Q86XR7 235 aa27.29■■□□□ 1.96
SKP1-206ENST00000519321 HHIPL1Q96JK4 782 aa27.29■■□□□ 1.96
SKP1-206ENST00000519321 RASSF10A6NK89 507 aa27.28■■□□□ 1.96
SKP1-206ENST00000519321 DYNLL1P63167 89 aaKnown RBP27.28■■□□□ 1.96
SKP1-206ENST00000519321 PICALMQ13492 652 aa27.28■■□□□ 1.96
SKP1-206ENST00000519321 FSD1Q9BTV5 496 aa27.28■■□□□ 1.96
SKP1-206ENST00000519321 RNF113AO15541 343 aaKnown RBP27.27■■□□□ 1.96
SKP1-206ENST00000519321 HUNKP57058 714 aa27.27■■□□□ 1.96
SKP1-206ENST00000519321 HTRA3P83110 453 aa27.27■■□□□ 1.96
SKP1-206ENST00000519321 DEFB115Q30KQ5 88 aa27.27■■□□□ 1.96
SKP1-206ENST00000519321 RIOK1Q9BRS2 568 aaKnown RBP27.27■■□□□ 1.96
SKP1-206ENST00000519321 DCAF15Q66K64 600 aa27.26■■□□□ 1.95
SKP1-206ENST00000519321 DDX4Q9NQI0 724 aaKnown RBP27.26■■□□□ 1.95
SKP1-206ENST00000519321 COL2A1P02458 1487 aaPredicted RBP27.25■■□□□ 1.95
SKP1-206ENST00000519321 PDE4AP27815 886 aa27.25■■□□□ 1.95
SKP1-206ENST00000519321 IREB2P48200 963 aaKnown RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms