RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 SALL1Q9NSC2 1324 aa16.53■□□□□ 0.24
PFDN1-206ENST00000514611 LDHBP07195 334 aaKnown RBP16.53■□□□□ 0.24
PFDN1-206ENST00000514611 TIMM10P62072 90 aa16.53■□□□□ 0.24
PFDN1-206ENST00000514611 TCP10Q12799 353 aa16.53■□□□□ 0.24
PFDN1-206ENST00000514611 TFCP2Q12800 502 aa16.53■□□□□ 0.24
PFDN1-206ENST00000514611 MTX1Q13505 466 aa16.53■□□□□ 0.24
PFDN1-206ENST00000514611 RASGRF1Q13972 1273 aa16.53■□□□□ 0.24
PFDN1-206ENST00000514611 CDC42EP5Q6NZY7 148 aa16.53■□□□□ 0.24
PFDN1-206ENST00000514611 ZKSCAN4Q969J2 545 aaPredicted RBP16.53■□□□□ 0.24
PFDN1-206ENST00000514611 TRIM17Q9Y577 477 aa16.53■□□□□ 0.24
PFDN1-206ENST00000514611 BRCA2P51587 3418 aa16.52■□□□□ 0.24
PFDN1-206ENST00000514611 CCL15-CCL14A0A0B4J2E2 113 aa16.52■□□□□ 0.24
PFDN1-206ENST00000514611 A0A1B0GUL7 405 aa16.52■□□□□ 0.24
PFDN1-206ENST00000514611 SPDYE5A6NIY4 337 aa16.52■□□□□ 0.24
PFDN1-206ENST00000514611 SEMA3EO15041 775 aa16.52■□□□□ 0.24
PFDN1-206ENST00000514611 CCL15Q16663 113 aa16.52■□□□□ 0.24
PFDN1-206ENST00000514611 OTUD7BQ6GQQ9 843 aa16.52■□□□□ 0.24
PFDN1-206ENST00000514611 MIGA2Q7L4E1 593 aa16.52■□□□□ 0.24
PFDN1-206ENST00000514611 MIER1Q8N108 512 aa16.52■□□□□ 0.24
PFDN1-206ENST00000514611 CD99L2Q8TCZ2 262 aa16.52■□□□□ 0.24
PFDN1-206ENST00000514611 TNRC18O15417 2968 aaPredicted RBP16.52■□□□□ 0.23
PFDN1-206ENST00000514611 PNMA6EA0A0J9YXQ4 647 aa16.51■□□□□ 0.23
PFDN1-206ENST00000514611 IPO8O15397 1037 aaKnown RBP16.51■□□□□ 0.23
PFDN1-206ENST00000514611 GTF2A2P52657 109 aa16.51■□□□□ 0.23
PFDN1-206ENST00000514611 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.23
PFDN1-206ENST00000514611 CAP1Q01518 475 aa16.51■□□□□ 0.23
PFDN1-206ENST00000514611 OTOP1Q7RTM1 612 aa16.51■□□□□ 0.23
PFDN1-206ENST00000514611 FAM43AQ8N2R8 423 aa16.51■□□□□ 0.23
PFDN1-206ENST00000514611 TMEM57Q8N5G2 664 aa16.51■□□□□ 0.23
PFDN1-206ENST00000514611 FAM151AQ8WW52 585 aa16.51■□□□□ 0.23
PFDN1-206ENST00000514611 XAGE2Q96GT9 111 aa16.51■□□□□ 0.23
PFDN1-206ENST00000514611 FAM198AQ9UFP1 575 aa16.51■□□□□ 0.23
PFDN1-206ENST00000514611 GNAI2P04899 355 aa16.5■□□□□ 0.23
PFDN1-206ENST00000514611 INPP5BP32019 993 aa16.5■□□□□ 0.23
PFDN1-206ENST00000514611 DCAF15Q66K64 600 aa16.5■□□□□ 0.23
PFDN1-206ENST00000514611 ZNF341Q9BYN7 854 aa16.5■□□□□ 0.23
PFDN1-206ENST00000514611 USP40Q9NVE5 1235 aa16.5■□□□□ 0.23
PFDN1-206ENST00000514611 IRF6O14896 467 aa16.49■□□□□ 0.23
PFDN1-206ENST00000514611 ERO1BQ86YB8 467 aa16.49■□□□□ 0.23
PFDN1-206ENST00000514611 DZIP1Q86YF9 867 aaKnown RBP16.49■□□□□ 0.23
PFDN1-206ENST00000514611 ZFPM1Q8IX07 1006 aa16.49■□□□□ 0.23
PFDN1-206ENST00000514611 HOOK2Q96ED9 719 aa16.49■□□□□ 0.23
PFDN1-206ENST00000514611 ERO1AQ96HE7 468 aa16.49■□□□□ 0.23
PFDN1-206ENST00000514611 ABCF2Q9UG63 623 aa16.49■□□□□ 0.23
PFDN1-206ENST00000514611 RFX7Q2KHR2 1363 aa16.49■□□□□ 0.23
PFDN1-206ENST00000514611 GAKO14976 1311 aa16.48■□□□□ 0.23
PFDN1-206ENST00000514611 ZBTB22O15209 634 aa16.48■□□□□ 0.23
PFDN1-206ENST00000514611 SP3Q02447 781 aa16.48■□□□□ 0.23
PFDN1-206ENST00000514611 MVPQ14764 893 aaKnown RBP16.48■□□□□ 0.23
PFDN1-206ENST00000514611 TAF1CQ15572 869 aaPredicted RBP16.48■□□□□ 0.23
PFDN1-206ENST00000514611 ZKSCAN2Q63HK3 967 aa16.48■□□□□ 0.23
PFDN1-206ENST00000514611 PI16Q6UXB8 463 aa16.48■□□□□ 0.23
PFDN1-206ENST00000514611 ZGPATQ8N5A5 531 aaKnown RBP16.48■□□□□ 0.23
PFDN1-206ENST00000514611 NEUROD6Q96NK8 337 aa16.48■□□□□ 0.23
PFDN1-206ENST00000514611 AKAP2Q9Y2D5 859 aa16.48■□□□□ 0.23
PFDN1-206ENST00000514611 PDS5AQ29RF7 1337 aaKnown RBP16.47■□□□□ 0.23
PFDN1-206ENST00000514611 PPIL2Q13356 520 aa16.47■□□□□ 0.23
PFDN1-206ENST00000514611 ATRNL1Q5VV63 1379 aa16.47■□□□□ 0.23
PFDN1-206ENST00000514611 MKI67P46013 3256 aaKnown RBP16.47■□□□□ 0.23
PFDN1-206ENST00000514611 BTBD19C9JJ37 291 aa16.46■□□□□ 0.23
PFDN1-206ENST00000514611 RGS3P49796 1198 aa16.46■□□□□ 0.23
PFDN1-206ENST00000514611 SNAPC2Q13487 334 aa16.46■□□□□ 0.23
PFDN1-206ENST00000514611 DIEXFQ68CQ4 756 aaKnown RBP16.46■□□□□ 0.23
PFDN1-206ENST00000514611 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.46■□□□□ 0.23
PFDN1-206ENST00000514611 C1orf115Q9H7X2 142 aa16.46■□□□□ 0.23
PFDN1-206ENST00000514611 EFCC1Q9HA90 598 aa16.46■□□□□ 0.23
PFDN1-206ENST00000514611 ZFYVE28Q9HCC9 887 aa16.46■□□□□ 0.23
PFDN1-206ENST00000514611 HMG20BQ9P0W2 317 aa16.46■□□□□ 0.23
PFDN1-206ENST00000514611 ZNF112Q9UJU3 913 aa16.46■□□□□ 0.23
PFDN1-206ENST00000514611 MROH7-TTC4A0A0A0MT08 1334 aa16.45■□□□□ 0.22
PFDN1-206ENST00000514611 SLURP2P0DP57 97 aa16.45■□□□□ 0.22
PFDN1-206ENST00000514611 CETPP11597 493 aa16.45■□□□□ 0.22
PFDN1-206ENST00000514611 BTDP43251 543 aa16.45■□□□□ 0.22
PFDN1-206ENST00000514611 MECOMQ03112 1051 aa16.45■□□□□ 0.22
PFDN1-206ENST00000514611 PPATQ06203 517 aa16.45■□□□□ 0.22
PFDN1-206ENST00000514611 ZNF384Q8TF68 577 aa16.45■□□□□ 0.22
PFDN1-206ENST00000514611 IDI2Q9BXS1 227 aa16.45■□□□□ 0.22
PFDN1-206ENST00000514611 DDX4Q9NQI0 724 aaKnown RBP16.45■□□□□ 0.22
PFDN1-206ENST00000514611 PTPN22Q9Y2R2 807 aa16.45■□□□□ 0.22
PFDN1-206ENST00000514611 WDHD1O75717 1129 aaPredicted RBP16.44■□□□□ 0.22
PFDN1-206ENST00000514611 G3BP1Q13283 466 aaKnown RBP eCLIP16.44■□□□□ 0.22
PFDN1-206ENST00000514611 PICALMQ13492 652 aa16.44■□□□□ 0.22
PFDN1-206ENST00000514611 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
PFDN1-206ENST00000514611 SH3BP5LQ7L8J4 393 aa16.44■□□□□ 0.22
PFDN1-206ENST00000514611 MYH2Q9UKX2 1941 aa16.43■□□□□ 0.22
PFDN1-206ENST00000514611 DOCK2Q92608 1830 aa16.43■□□□□ 0.22
PFDN1-206ENST00000514611 ENTPD3O75355 529 aa16.43■□□□□ 0.22
PFDN1-206ENST00000514611 RLBP1P12271 317 aa16.43■□□□□ 0.22
PFDN1-206ENST00000514611 ARID4AP29374 1257 aaPredicted RBP16.43■□□□□ 0.22
PFDN1-206ENST00000514611 MCAMP43121 646 aa16.43■□□□□ 0.22
PFDN1-206ENST00000514611 POLA2Q14181 598 aa16.43■□□□□ 0.22
PFDN1-206ENST00000514611 NOL9Q5SY16 702 aaKnown RBP16.43■□□□□ 0.22
PFDN1-206ENST00000514611 GORABQ5T7V8 394 aa16.43■□□□□ 0.22
PFDN1-206ENST00000514611 SPTY2D1Q68D10 685 aaPredicted RBP16.43■□□□□ 0.22
PFDN1-206ENST00000514611 TBC1D9Q6ZT07 1266 aa16.43■□□□□ 0.22
PFDN1-206ENST00000514611 FTSJ3Q8IY81 847 aaKnown RBP16.43■□□□□ 0.22
PFDN1-206ENST00000514611 SPATA5Q8NB90 893 aa16.43■□□□□ 0.22
PFDN1-206ENST00000514611 FAM163AQ96GL9 167 aaPredicted RBP16.43■□□□□ 0.22
PFDN1-206ENST00000514611 DDTLA6NHG4 134 aaPredicted RBP16.42■□□□□ 0.22
PFDN1-206ENST00000514611 TLR2O60603 784 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms