RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 PRC1O43663 620 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 F13A1P00488 732 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 APPP05067 770 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 FGRP09769 529 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 PDIA3P30101 505 aaKnown RBP9.87□□□□□ -0.83
RNF4-220ENST00000513578 ANTXR2P58335 489 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 HAND2P61296 217 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 HMGN5P82970 282 aaKnown RBP9.87□□□□□ -0.83
RNF4-220ENST00000513578 FGD1P98174 961 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 SLC15A2Q16348 729 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 KLHL40Q2TBA0 621 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 AKNAD1Q5T1N1 836 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 TXNRD3Q86VQ6 643 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 CERS3Q8IU89 383 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 TBC1D10CQ8IV04 446 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 ZNF384Q8TF68 577 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 STAG1Q8WVM7 1258 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 LARP6Q9BRS8 491 aaKnown RBP9.87□□□□□ -0.83
RNF4-220ENST00000513578 KRT23Q9C075 422 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 RNF41Q9H4P4 317 aaPredicted RBP9.87□□□□□ -0.83
RNF4-220ENST00000513578 GGA1Q9UJY5 639 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 IQSEC3Q9UPP2 1182 aaPredicted RBP9.87□□□□□ -0.83
RNF4-220ENST00000513578 SLC4A4Q9Y6R1 1079 aa9.87□□□□□ -0.83
RNF4-220ENST00000513578 FAM205AQ6ZU69 1335 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 PPEF1O14829 653 aaPredicted RBP9.86□□□□□ -0.83
RNF4-220ENST00000513578 DHX16O60231 1041 aaKnown RBP9.86□□□□□ -0.83
RNF4-220ENST00000513578 LIFRP42702 1097 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 RCAN1P53805 252 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 PPP4CP60510 307 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 GSTO1P78417 241 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 MECOMQ03112 1051 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 SCRN1Q12765 414 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 MCTP1Q6DN14 999 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 ADGRA1Q86SQ6 560 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 SGMS1Q86VZ5 419 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 TBC1D16Q8TBP0 767 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 MASTLQ96GX5 879 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 CD209Q9NNX6 404 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 ATP8A2Q9NTI2 1148 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 ISY1Q9ULR0 285 aaKnown RBP9.86□□□□□ -0.83
RNF4-220ENST00000513578 KIF3AQ9Y496 699 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 NID2Q14112 1375 aa9.86□□□□□ -0.83
RNF4-220ENST00000513578 NAV1Q8NEY1 1877 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 KIF13BQ9NQT8 1826 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 SH2B2O14492 632 aaPredicted RBP9.85□□□□□ -0.83
RNF4-220ENST00000513578 PRKAB2O43741 272 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 UFL1O94874 794 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 LDHCP07864 332 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 MMP10P09238 476 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 APOBRQ0VD83 1088 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 SBK1Q52WX2 424 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 LARP1BQ659C4 914 aaKnown RBP9.85□□□□□ -0.83
RNF4-220ENST00000513578 STYK1Q6J9G0 422 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 MFSD6Q6ZSS7 791 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 KLHL34Q8N239 644 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 NSUN7Q8NE18 718 aaKnown RBP9.85□□□□□ -0.83
RNF4-220ENST00000513578 IGDCC4Q8TDY8 1250 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 TBC1D22AQ8WUA7 517 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 FAM163AQ96GL9 167 aaPredicted RBP9.85□□□□□ -0.83
RNF4-220ENST00000513578 STK32BQ9NY57 414 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 ANGEL1Q9UNK9 670 aaKnown RBP9.85□□□□□ -0.83
RNF4-220ENST00000513578 NSFL1CQ9UNZ2 370 aaKnown RBP9.85□□□□□ -0.83
RNF4-220ENST00000513578 SUGT1Q9Y2Z0 365 aa9.85□□□□□ -0.83
RNF4-220ENST00000513578 ZNF646O15015 1829 aaPredicted RBP9.84□□□□□ -0.83
RNF4-220ENST00000513578 CTDNEP1O95476 244 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 MBD3O95983 291 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 LDHBP07195 334 aaKnown RBP9.84□□□□□ -0.83
RNF4-220ENST00000513578 DEKP35659 375 aaKnown RBP9.84□□□□□ -0.83
RNF4-220ENST00000513578 TDO2P48775 406 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 PPARAQ07869 468 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 CSPP1Q1MSJ5 1256 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 CYB5R4Q7L1T6 521 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 DEFB132Q7Z7B7 95 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 TMTC2Q8N394 836 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 MIGA1Q8NAN2 632 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 LRRC2Q9BYS8 371 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 CRNKL1Q9BZJ0 848 aaKnown RBP9.84□□□□□ -0.83
RNF4-220ENST00000513578 COA1Q9GZY4 146 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 POLLQ9UGP5 575 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 HPS5Q9UPZ3 1129 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 DDX60LQ5H9U9 1706 aaKnown RBP9.84□□□□□ -0.83
RNF4-220ENST00000513578 PSME4Q14997 1843 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 ECM29Q5VYK3 1845 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 SLX4Q8IY92 1834 aa9.84□□□□□ -0.83
RNF4-220ENST00000513578 NEDD4P46934 1319 aa9.83□□□□□ -0.84
RNF4-220ENST00000513578 PSDA5PKW4 1024 aaPredicted RBP9.83□□□□□ -0.84
RNF4-220ENST00000513578 B4E1Z4 1266 aa9.83□□□□□ -0.84
RNF4-220ENST00000513578 ORC4O43929 436 aa9.83□□□□□ -0.84
RNF4-220ENST00000513578 PRDX5P30044 214 aa9.83□□□□□ -0.84
RNF4-220ENST00000513578 C1QTNF8P60827 252 aa9.83□□□□□ -0.84
RNF4-220ENST00000513578 DYNLL1P63167 89 aaKnown RBP9.83□□□□□ -0.84
RNF4-220ENST00000513578 CHAF1AQ13111 956 aaPredicted RBP9.83□□□□□ -0.84
RNF4-220ENST00000513578 STK3Q13188 491 aa9.83□□□□□ -0.84
RNF4-220ENST00000513578 EZH2Q15910 746 aaKnown RBP9.83□□□□□ -0.84
RNF4-220ENST00000513578 SLF2Q8IX21 1173 aa9.83□□□□□ -0.84
RNF4-220ENST00000513578 ZSCAN16Q9H4T2 348 aaPredicted RBP9.83□□□□□ -0.84
RNF4-220ENST00000513578 ZSWIM5Q9P217 1185 aa9.83□□□□□ -0.84
RNF4-220ENST00000513578 ARPP21Q9UBL0 812 aaPredicted RBP9.83□□□□□ -0.84
RNF4-220ENST00000513578 BRPF3Q9ULD4 1205 aa9.83□□□□□ -0.84
RNF4-220ENST00000513578 TACC3Q9Y6A5 838 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms