RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 TBC1D9Q6ZT07 1266 aa14.28□□□□□ -0.12
SH3RF1-205ENST00000511421 FAM163AQ96GL9 167 aaPredicted RBP14.28□□□□□ -0.12
SH3RF1-205ENST00000511421 TLR7Q9NYK1 1049 aaKnown RBP14.28□□□□□ -0.12
SH3RF1-205ENST00000511421 UNCXA6NJT0 531 aa14.27□□□□□ -0.12
SH3RF1-205ENST00000511421 MECOMQ03112 1051 aa14.27□□□□□ -0.12
SH3RF1-205ENST00000511421 CCDC158Q5M9N0 1113 aa14.27□□□□□ -0.12
SH3RF1-205ENST00000511421 ERICH6Q7L0X2 663 aa14.27□□□□□ -0.12
SH3RF1-205ENST00000511421 DZIP1Q86YF9 867 aaKnown RBP14.27□□□□□ -0.12
SH3RF1-205ENST00000511421 ERC1Q8IUD2 1116 aa14.27□□□□□ -0.12
SH3RF1-205ENST00000511421 CLMNQ96JQ2 1002 aa14.27□□□□□ -0.12
SH3RF1-205ENST00000511421 ZNF512BQ96KM6 892 aaPredicted RBP14.27□□□□□ -0.12
SH3RF1-205ENST00000511421 YTHDC1Q96MU7 727 aaKnown RBP14.27□□□□□ -0.12
SH3RF1-205ENST00000511421 CCDC8Q9H0W5 538 aaPredicted RBP14.27□□□□□ -0.12
SH3RF1-205ENST00000511421 TSKSQ9UJT2 592 aa14.27□□□□□ -0.12
SH3RF1-205ENST00000511421 HMMRO75330 724 aa14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 IREB2P48200 963 aaKnown RBP14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 NFIAQ12857 509 aa14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 HSP90AB4PQ58FF6 505 aa14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 TTC39AQ5SRH9 613 aa14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 RHPN1Q8TCX5 695 aa14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 USP40Q9NVE5 1235 aa14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 SPRYD7Q5W111 196 aa14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 SLF2Q8IX21 1173 aa14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 FAM151AQ8WW52 585 aa14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 NSUN4Q96CB9 384 aaKnown RBP14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 SLC10A4Q96EP9 437 aa14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 SNRKQ9NRH2 765 aa14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 RNF186Q9NXI6 227 aa14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 FAM198AQ9UFP1 575 aa14.26□□□□□ -0.13
SH3RF1-205ENST00000511421 RPAP1Q9BWH6 1393 aaPredicted RBP14.25□□□□□ -0.13
SH3RF1-205ENST00000511421 MKRN3Q13064 507 aaKnown RBP14.25□□□□□ -0.13
SH3RF1-205ENST00000511421 ANKRD13AQ8IZ07 590 aa14.25□□□□□ -0.13
SH3RF1-205ENST00000511421 SAGE1Q9NXZ1 904 aa14.25□□□□□ -0.13
SH3RF1-205ENST00000511421 MROH7-TTC4A0A0A0MT08 1334 aa14.25□□□□□ -0.13
SH3RF1-205ENST00000511421 MYH2Q9UKX2 1941 aa14.24□□□□□ -0.13
SH3RF1-205ENST00000511421 GPR75-ASB3A0A0A6YYF3 556 aa14.24□□□□□ -0.13
SH3RF1-205ENST00000511421 CYP2E1P05181 493 aaPredicted RBP14.24□□□□□ -0.13
SH3RF1-205ENST00000511421 BTDP43251 543 aa14.24□□□□□ -0.13
SH3RF1-205ENST00000511421 TM4SF4P48230 202 aa14.24□□□□□ -0.13
SH3RF1-205ENST00000511421 TCP10Q12799 353 aa14.24□□□□□ -0.13
SH3RF1-205ENST00000511421 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.24□□□□□ -0.13
SH3RF1-205ENST00000511421 AACSQ86V21 672 aa14.24□□□□□ -0.13
SH3RF1-205ENST00000511421 WNK4Q96J92 1243 aa14.24□□□□□ -0.13
SH3RF1-205ENST00000511421 IDI2Q9BXS1 227 aa14.24□□□□□ -0.13
SH3RF1-205ENST00000511421 IL1RAPL2Q9NP60 686 aa14.24□□□□□ -0.13
SH3RF1-205ENST00000511421 RFX7Q2KHR2 1363 aa14.24□□□□□ -0.13
SH3RF1-205ENST00000511421 ZAP70P43403 619 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 MAP3K9P80192 1104 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 IFFO2Q5TF58 517 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 ZFPM1Q8IX07 1006 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 TNS4Q8IZW8 715 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 KIF1BPQ96EK5 621 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 RAI14Q9P0K7 980 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 AKAP11Q9UKA4 1901 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 RAB11FIP3O75154 756 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 WDHD1O75717 1129 aaPredicted RBP14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 TRPA1O75762 1119 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 ZBTB48P10074 688 aaPredicted RBP14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 GJA5P36382 358 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 RRP1P56182 461 aaKnown RBP14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 RHBDL3P58872 404 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 GSTO1P78417 241 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 LRP2BPQ9P2M1 347 aa14.23□□□□□ -0.13
SH3RF1-205ENST00000511421 APBB1O00213 710 aa14.22□□□□□ -0.13
SH3RF1-205ENST00000511421 ENTPD3O75355 529 aa14.22□□□□□ -0.13
SH3RF1-205ENST00000511421 LDHCP07864 332 aa14.22□□□□□ -0.13
SH3RF1-205ENST00000511421 RGS3P49796 1198 aa14.22□□□□□ -0.13
SH3RF1-205ENST00000511421 VGLL4Q14135 290 aa14.22□□□□□ -0.13
SH3RF1-205ENST00000511421 HOOK2Q96ED9 719 aa14.22□□□□□ -0.13
SH3RF1-205ENST00000511421 DDX4Q9NQI0 724 aaKnown RBP14.22□□□□□ -0.13
SH3RF1-205ENST00000511421 PIH1D3Q9NQM4 214 aaKnown RBP14.22□□□□□ -0.13
SH3RF1-205ENST00000511421 MIGA2Q7L4E1 593 aa14.21□□□□□ -0.13
SH3RF1-205ENST00000511421 CLASRPQ8N2M8 674 aaKnown RBP14.21□□□□□ -0.13
SH3RF1-205ENST00000511421 ELP3Q9H9T3 547 aa14.21□□□□□ -0.13
SH3RF1-205ENST00000511421 MANSC4A6NHS7 340 aaPredicted RBP14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 SREBF2Q12772 1141 aa14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 DCAF15Q66K64 600 aa14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 SH3BP5LQ7L8J4 393 aa14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 OTOFQ9HC10 1997 aa14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 IGSF3O75054 1194 aa14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 NPM3O75607 178 aaKnown RBP14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 MAP4K4O95819 1239 aaPredicted RBP14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 NAA16Q6N069 864 aaPredicted RBP14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 OPTNQ96CV9 577 aa14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 WRNIP1Q96S55 665 aa14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 ZNF341Q9BYN7 854 aa14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 ZNF112Q9UJU3 913 aa14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 CSADQ9Y600 493 aa14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 SNCAIPQ9Y6H5 919 aa14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 NDUFB9Q9Y6M9 179 aa14.2□□□□□ -0.14
SH3RF1-205ENST00000511421 ATRNL1Q5VV63 1379 aa14.19□□□□□ -0.14
SH3RF1-205ENST00000511421 INHBEP58166 350 aa14.19□□□□□ -0.14
SH3RF1-205ENST00000511421 ADGRA1Q86SQ6 560 aa14.19□□□□□ -0.14
SH3RF1-205ENST00000511421 ZKSCAN4Q969J2 545 aaPredicted RBP14.19□□□□□ -0.14
SH3RF1-205ENST00000511421 ANTXR1Q9H6X2 564 aa14.19□□□□□ -0.14
SH3RF1-205ENST00000511421 TESPA1A2RU30 521 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms