RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 CCNJLQ8IV13 435 aa6.31□□□□□ -1.4
SMARCA5-202ENST00000508573 AGBL5Q8NDL9 886 aa6.31□□□□□ -1.4
SMARCA5-202ENST00000508573 NRSN2Q9GZP1 204 aa6.31□□□□□ -1.4
SMARCA5-202ENST00000508573 SEMA6CQ9H3T2 930 aa6.31□□□□□ -1.4
SMARCA5-202ENST00000508573 ZFYVE1Q9HBF4 777 aa6.31□□□□□ -1.4
SMARCA5-202ENST00000508573 FAM105AQ9NUU6 356 aa6.31□□□□□ -1.4
SMARCA5-202ENST00000508573 ECEL1O95672 775 aa6.3□□□□□ -1.4
SMARCA5-202ENST00000508573 BRD1O95696 1058 aa6.3□□□□□ -1.4
SMARCA5-202ENST00000508573 SF3B2Q13435 895 aaKnown RBP6.3□□□□□ -1.4
SMARCA5-202ENST00000508573 HP1BP3Q5SSJ5 553 aaPredicted RBP6.3□□□□□ -1.4
SMARCA5-202ENST00000508573 DDX54Q8TDD1 881 aaKnown RBP6.3□□□□□ -1.4
SMARCA5-202ENST00000508573 CORO1BQ9BR76 489 aa6.3□□□□□ -1.4
SMARCA5-202ENST00000508573 PAK6Q9NQU5 681 aaPredicted RBP6.3□□□□□ -1.4
SMARCA5-202ENST00000508573 AP4E1Q9UPM8 1137 aa6.3□□□□□ -1.4
SMARCA5-202ENST00000508573 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.29□□□□□ -1.4
SMARCA5-202ENST00000508573 CARNS1A5YM72 827 aa6.29□□□□□ -1.4
SMARCA5-202ENST00000508573 JUNBP17275 347 aaPredicted RBP6.29□□□□□ -1.4
SMARCA5-202ENST00000508573 PDE4CQ08493 712 aa6.29□□□□□ -1.4
SMARCA5-202ENST00000508573 GALNT12Q8IXK2 581 aa6.29□□□□□ -1.4
SMARCA5-202ENST00000508573 GJD3Q8N144 294 aa6.29□□□□□ -1.4
SMARCA5-202ENST00000508573 TCF12Q99081 682 aa6.29□□□□□ -1.4
SMARCA5-202ENST00000508573 ACSS3Q9H6R3 686 aa6.29□□□□□ -1.4
SMARCA5-202ENST00000508573 DAGLAQ9Y4D2 1042 aa6.29□□□□□ -1.4
SMARCA5-202ENST00000508573 DYNC1LI2O43237 492 aaPredicted RBP6.28□□□□□ -1.4
SMARCA5-202ENST00000508573 C8AP07357 584 aa6.28□□□□□ -1.4
SMARCA5-202ENST00000508573 ZNF211Q13398 564 aaPredicted RBP6.28□□□□□ -1.4
SMARCA5-202ENST00000508573 PDE3AQ14432 1141 aa6.28□□□□□ -1.4
SMARCA5-202ENST00000508573 OGFOD3Q6PK18 319 aa6.28□□□□□ -1.4
SMARCA5-202ENST00000508573 CERS3Q8IU89 383 aa6.28□□□□□ -1.4
SMARCA5-202ENST00000508573 C1GALT1Q9NS00 363 aa6.28□□□□□ -1.4
SMARCA5-202ENST00000508573 AOC2O75106 756 aa6.27□□□□□ -1.41
SMARCA5-202ENST00000508573 ITGB5P18084 799 aa6.27□□□□□ -1.41
SMARCA5-202ENST00000508573 BNIP3Q12983 259 aa6.27□□□□□ -1.41
SMARCA5-202ENST00000508573 USPL1Q5W0Q7 1092 aa6.27□□□□□ -1.41
SMARCA5-202ENST00000508573 PHLDB3Q6NSJ2 640 aa6.27□□□□□ -1.41
SMARCA5-202ENST00000508573 TRIM56Q9BRZ2 755 aaKnown RBP6.27□□□□□ -1.41
SMARCA5-202ENST00000508573 EHD4Q9H223 541 aa6.27□□□□□ -1.41
SMARCA5-202ENST00000508573 SLC5A6Q9Y289 635 aa6.27□□□□□ -1.41
SMARCA5-202ENST00000508573 NEFLP07196 543 aa6.26□□□□□ -1.41
SMARCA5-202ENST00000508573 KIAA0319Q5VV43 1072 aa6.26□□□□□ -1.41
SMARCA5-202ENST00000508573 SEZ6L2Q6UXD5 910 aa6.26□□□□□ -1.41
SMARCA5-202ENST00000508573 ZNF574Q6ZN55 896 aaPredicted RBP6.26□□□□□ -1.41
SMARCA5-202ENST00000508573 SND1Q7KZF4 910 aaKnown RBP eCLIP6.26□□□□□ -1.41
SMARCA5-202ENST00000508573 POU5F2Q8N7G0 328 aa6.26□□□□□ -1.41
SMARCA5-202ENST00000508573 BCL7CQ8WUZ0 217 aaPredicted RBP6.26□□□□□ -1.41
SMARCA5-202ENST00000508573 BRPF3Q9ULD4 1205 aa6.26□□□□□ -1.41
SMARCA5-202ENST00000508573 PPP1R9AQ9ULJ8 1098 aa6.26□□□□□ -1.41
SMARCA5-202ENST00000508573 RBM47A0AV96 593 aaKnown RBP6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 LIG1P18858 919 aa6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 CANXP27824 592 aaKnown RBP6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 ZNF157P51786 506 aaPredicted RBP6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 JAG1P78504 1218 aa6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 PLCL1Q15111 1095 aa6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 CYP27C1Q4G0S4 372 aa6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 SPRED2Q7Z698 418 aa6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 ZC3H12CQ9C0D7 883 aaKnown RBP6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 GSX1Q9H4S2 264 aaPredicted RBP6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 KIAA1522Q9P206 1035 aaPredicted RBP6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 IVNS1ABPQ9Y6Y0 642 aa6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 CADPSQ9ULU8 1353 aa6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 ARID1BQ8NFD5 2236 aaPredicted RBP6.25□□□□□ -1.41
SMARCA5-202ENST00000508573 SMARCA5O60264 1052 aaPredicted RBP6.24□□□□□ -1.41
SMARCA5-202ENST00000508573 B3GALT4O96024 378 aa6.24□□□□□ -1.41
SMARCA5-202ENST00000508573 TAF7LQ5H9L4 462 aa6.24□□□□□ -1.41
SMARCA5-202ENST00000508573 WDR18Q9BV38 432 aa6.24□□□□□ -1.41
SMARCA5-202ENST00000508573 ZNF576Q9H609 170 aa6.24□□□□□ -1.41
SMARCA5-202ENST00000508573 SLFN14P0C7P3 912 aa6.23□□□□□ -1.41
SMARCA5-202ENST00000508573 ZNF792Q3KQV3 632 aa6.23□□□□□ -1.41
SMARCA5-202ENST00000508573 WDR89Q96FK6 387 aaPredicted RBP6.23□□□□□ -1.41
SMARCA5-202ENST00000508573 ARID4BQ4LE39 1312 aaPredicted RBP6.23□□□□□ -1.41
SMARCA5-202ENST00000508573 BIN1O00499 593 aa6.22□□□□□ -1.41
SMARCA5-202ENST00000508573 ICMTO60725 284 aa6.22□□□□□ -1.41
SMARCA5-202ENST00000508573 PAPLNO95428 1278 aa6.22□□□□□ -1.41
SMARCA5-202ENST00000508573 FAM87AP0C7U9 286 aa6.22□□□□□ -1.41
SMARCA5-202ENST00000508573 CDK5R2Q13319 367 aa6.22□□□□□ -1.41
SMARCA5-202ENST00000508573 ORC1Q13415 861 aa6.22□□□□□ -1.41
SMARCA5-202ENST00000508573 ZNF648Q5T619 568 aaPredicted RBP6.22□□□□□ -1.41
SMARCA5-202ENST00000508573 STK11IPQ8N1F8 1099 aa6.22□□□□□ -1.41
SMARCA5-202ENST00000508573 SPATA32Q96LK8 384 aa6.22□□□□□ -1.41
SMARCA5-202ENST00000508573 PIDD1Q9HB75 910 aa6.22□□□□□ -1.41
SMARCA5-202ENST00000508573 NPHS2Q9NP85 383 aa6.22□□□□□ -1.41
SMARCA5-202ENST00000508573 RNGTTO60942 597 aaKnown RBP6.21□□□□□ -1.42
SMARCA5-202ENST00000508573 CPNE3O75131 537 aaKnown RBP6.21□□□□□ -1.42
SMARCA5-202ENST00000508573 ITPKAP23677 461 aa6.21□□□□□ -1.42
SMARCA5-202ENST00000508573 AP3B2Q13367 1082 aa6.21□□□□□ -1.42
SMARCA5-202ENST00000508573 PLD6Q8N2A8 252 aaKnown RBP6.21□□□□□ -1.42
SMARCA5-202ENST00000508573 FAM181AQ8N9Y4 354 aa6.21□□□□□ -1.42
SMARCA5-202ENST00000508573 NETO1Q8TDF5 533 aa6.21□□□□□ -1.42
SMARCA5-202ENST00000508573 CCDC86Q9H6F5 360 aaKnown RBP6.21□□□□□ -1.42
SMARCA5-202ENST00000508573 USTQ9Y2C2 406 aa6.21□□□□□ -1.42
SMARCA5-202ENST00000508573 TMPRSS2O15393 492 aa6.2□□□□□ -1.42
SMARCA5-202ENST00000508573 GADD45BO75293 160 aaPredicted RBP6.2□□□□□ -1.42
SMARCA5-202ENST00000508573 CD8BP10966 210 aa6.2□□□□□ -1.42
SMARCA5-202ENST00000508573 ZNF124Q15973 351 aa6.2□□□□□ -1.42
SMARCA5-202ENST00000508573 GLYCTKQ8IVS8 523 aa6.2□□□□□ -1.42
SMARCA5-202ENST00000508573 MISP3Q96FF7 219 aa6.2□□□□□ -1.42
SMARCA5-202ENST00000508573 FANCD2OSQ96PS1 177 aa6.2□□□□□ -1.42
SMARCA5-202ENST00000508573 CRIM1Q9NZV1 1036 aa6.2□□□□□ -1.42
SMARCA5-202ENST00000508573 SYNGAP1Q96PV0 1343 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 1225.4 ms