RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 MYO1BO43795 1136 aa11.57□□□□□ -0.56
DHFR-202ENST00000504396 WNT2BQ93097 391 aa11.57□□□□□ -0.56
DHFR-202ENST00000504396 TSR2Q969E8 191 aaKnown RBP11.57□□□□□ -0.56
DHFR-202ENST00000504396 VEZTQ9HBM0 779 aa11.57□□□□□ -0.56
DHFR-202ENST00000504396 CHMP3Q9Y3E7 222 aa11.57□□□□□ -0.56
DHFR-202ENST00000504396 PPP1R12BO60237 982 aaPredicted RBP11.56□□□□□ -0.56
DHFR-202ENST00000504396 RBM5P52756 815 aaKnown RBP eCLIP11.56□□□□□ -0.562e-7■□□□□ 11
DHFR-202ENST00000504396 GCC1Q96CN9 775 aa11.56□□□□□ -0.56
DHFR-202ENST00000504396 DEFB129Q9H1M3 183 aa11.56□□□□□ -0.56
DHFR-202ENST00000504396 NPDC1Q9NQX5 325 aaPredicted RBP11.56□□□□□ -0.56
DHFR-202ENST00000504396 HCSTQ9UBK5 93 aa11.56□□□□□ -0.56
DHFR-202ENST00000504396 FAM198AQ9UFP1 575 aa11.56□□□□□ -0.56
DHFR-202ENST00000504396 ECM29Q5VYK3 1845 aa11.55□□□□□ -0.56
DHFR-202ENST00000504396 CLRN2A0PK11 232 aa11.55□□□□□ -0.56
DHFR-202ENST00000504396 CHRNDQ07001 517 aa11.55□□□□□ -0.56
DHFR-202ENST00000504396 PACS2Q86VP3 889 aa11.55□□□□□ -0.56
DHFR-202ENST00000504396 WNK4Q96J92 1243 aa11.55□□□□□ -0.56
DHFR-202ENST00000504396 CLMNQ96JQ2 1002 aa11.55□□□□□ -0.56
DHFR-202ENST00000504396 CFHR5Q9BXR6 569 aa11.55□□□□□ -0.56
DHFR-202ENST00000504396 MYH16Q9H6N6 1097 aa11.55□□□□□ -0.56
DHFR-202ENST00000504396 LAMB1P07942 1786 aa11.55□□□□□ -0.56
DHFR-202ENST00000504396 ANKRD18BA2A2Z9 1011 aa11.54□□□□□ -0.56
DHFR-202ENST00000504396 FKBP5Q13451 457 aaPredicted RBP11.54□□□□□ -0.56
DHFR-202ENST00000504396 LDLRAD1Q5T700 205 aa11.54□□□□□ -0.56
DHFR-202ENST00000504396 PRKRIP1Q9H875 184 aaPredicted RBP11.54□□□□□ -0.56
DHFR-202ENST00000504396 CD209Q9NNX6 404 aa11.54□□□□□ -0.56
DHFR-202ENST00000504396 JAG2Q9Y219 1238 aa11.54□□□□□ -0.56
DHFR-202ENST00000504396 TESPA1A2RU30 521 aaPredicted RBP11.53□□□□□ -0.56
DHFR-202ENST00000504396 TAF5LO75529 589 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 ZBTB48P10074 688 aaPredicted RBP11.53□□□□□ -0.56
DHFR-202ENST00000504396 IREB2P48200 963 aaKnown RBP11.53□□□□□ -0.56
DHFR-202ENST00000504396 PTPN5P54829 565 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 INHBEP58166 350 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 GCKRQ14397 625 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 TWISTNBQ3B726 338 aaPredicted RBP11.53□□□□□ -0.56
DHFR-202ENST00000504396 SUPT20HL1Q3ZLR7 823 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 CFAP100Q494V2 611 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 OTUD7BQ6GQQ9 843 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 THSD4Q6ZMP0 1018 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 G2E3Q7L622 706 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 OTOP1Q7RTM1 612 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 ZNF804AQ7Z570 1209 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 LAPTM4BQ86VI4 370 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 HELBQ8NG08 1087 aaPredicted RBP11.53□□□□□ -0.56
DHFR-202ENST00000504396 ERO1AQ96HE7 468 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 PLA2G12BQ9BX93 195 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 PCDHAC2Q9Y5I4 1007 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 PPP2R3BQ9Y5P8 575 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 SSC5DA1L4H1 1573 aa11.53□□□□□ -0.56
DHFR-202ENST00000504396 UNCXA6NJT0 531 aa11.52□□□□□ -0.56
DHFR-202ENST00000504396 H7C1W4 665 aa11.52□□□□□ -0.56
DHFR-202ENST00000504396 SNAP23O00161 211 aa11.52□□□□□ -0.56
DHFR-202ENST00000504396 IGF2BP3O00425 579 aaKnown RBP eCLIP11.52□□□□□ -0.56
DHFR-202ENST00000504396 PLIN1O60240 522 aa11.52□□□□□ -0.56
DHFR-202ENST00000504396 TAF7LQ5H9L4 462 aa11.52□□□□□ -0.56
DHFR-202ENST00000504396 INTS3Q68E01 1043 aaKnown RBP11.52□□□□□ -0.56
DHFR-202ENST00000504396 CD99L2Q8TCZ2 262 aa11.52□□□□□ -0.56
DHFR-202ENST00000504396 ZBED3Q96IU2 234 aaPredicted RBP11.52□□□□□ -0.56
DHFR-202ENST00000504396 A0A1B0GUL6 1792 aa11.52□□□□□ -0.56
DHFR-202ENST00000504396 C3orf80F5H4A9 247 aa11.52□□□□□ -0.57
DHFR-202ENST00000504396 SMAPO00193 183 aa11.52□□□□□ -0.57
DHFR-202ENST00000504396 FLIIQ13045 1269 aa11.52□□□□□ -0.57
DHFR-202ENST00000504396 CRHR2Q13324 411 aa11.52□□□□□ -0.57
DHFR-202ENST00000504396 IFIT5Q13325 482 aaKnown RBP11.52□□□□□ -0.57
DHFR-202ENST00000504396 CCDC27Q2M243 656 aa11.52□□□□□ -0.57
DHFR-202ENST00000504396 NBPF12Q5TAG4 269 aaPredicted RBP11.52□□□□□ -0.57
DHFR-202ENST00000504396 CERS5Q8N5B7 392 aa11.52□□□□□ -0.57
DHFR-202ENST00000504396 DNAAF4Q8WXU2 420 aa11.52□□□□□ -0.57
DHFR-202ENST00000504396 ZFRQ96KR1 1074 aaKnown RBP11.52□□□□□ -0.57
DHFR-202ENST00000504396 MAP3K11Q16584 847 aa11.51□□□□□ -0.57
DHFR-202ENST00000504396 PADI6Q6TGC4 694 aa11.51□□□□□ -0.57
DHFR-202ENST00000504396 ANKK1Q8NFD2 765 aa11.51□□□□□ -0.57
DHFR-202ENST00000504396 ELP3Q9H9T3 547 aa11.51□□□□□ -0.57
DHFR-202ENST00000504396 EFCC1Q9HA90 598 aa11.51□□□□□ -0.57
DHFR-202ENST00000504396 PTPN22Q9Y2R2 807 aa11.51□□□□□ -0.57
DHFR-202ENST00000504396 OTOFQ9HC10 1997 aa11.51□□□□□ -0.57
DHFR-202ENST00000504396 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
DHFR-202ENST00000504396 CSF1RP07333 972 aa11.5□□□□□ -0.57
DHFR-202ENST00000504396 RASA3Q14644 834 aa11.5□□□□□ -0.57
DHFR-202ENST00000504396 HABP4Q5JVS0 413 aaKnown RBP11.5□□□□□ -0.57
DHFR-202ENST00000504396 C15orf52Q6ZUT6 534 aaKnown RBP11.5□□□□□ -0.57
DHFR-202ENST00000504396 ANKRD13AQ8IZ07 590 aa11.5□□□□□ -0.57
DHFR-202ENST00000504396 MTMR14Q8NCE2 650 aa11.5□□□□□ -0.57
DHFR-202ENST00000504396 LINS1Q8NG48 757 aa11.5□□□□□ -0.57
DHFR-202ENST00000504396 PRMT6Q96LA8 375 aaPredicted RBP11.5□□□□□ -0.57
DHFR-202ENST00000504396 CNNM1Q9NRU3 951 aa11.5□□□□□ -0.57
DHFR-202ENST00000504396 RBM27Q9P2N5 1060 aaKnown RBP11.5□□□□□ -0.57
DHFR-202ENST00000504396 IL16Q14005 1332 aa11.49□□□□□ -0.57
DHFR-202ENST00000504396 MYCP01106 439 aaPredicted RBP11.49□□□□□ -0.57
DHFR-202ENST00000504396 FKBP1AP62942 108 aaKnown RBP11.49□□□□□ -0.57
DHFR-202ENST00000504396 SP3Q02447 781 aa11.49□□□□□ -0.57
DHFR-202ENST00000504396 PTGDRQ13258 359 aa11.49□□□□□ -0.57
DHFR-202ENST00000504396 TNFAIP1Q13829 316 aa11.49□□□□□ -0.57
DHFR-202ENST00000504396 OPTNQ96CV9 577 aa11.49□□□□□ -0.57
DHFR-202ENST00000504396 AOX1Q06278 1338 aa11.49□□□□□ -0.57
DHFR-202ENST00000504396 IL1R1P14778 569 aa11.48□□□□□ -0.57
DHFR-202ENST00000504396 EN2P19622 333 aaPredicted RBP11.48□□□□□ -0.57
DHFR-202ENST00000504396 GJA5P36382 358 aa11.48□□□□□ -0.57
DHFR-202ENST00000504396 BCAMP50895 628 aa11.48□□□□□ -0.57
DHFR-202ENST00000504396 CASP7P55210 303 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms