RNA–Protein interactions for RNA: ENST00000502751.5

LMNA-219, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-219ENST00000502751 IFNL1Q8IU54 200 aa20.31■□□□□ 0.84
LMNA-219ENST00000502751 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.31■□□□□ 0.84
LMNA-219ENST00000502751 SSH3Q8TE77 659 aa20.31■□□□□ 0.84
LMNA-219ENST00000502751 ZNF296Q8WUU4 475 aaPredicted RBP20.31■□□□□ 0.84
LMNA-219ENST00000502751 CFHR5Q9BXR6 569 aa20.31■□□□□ 0.84
LMNA-219ENST00000502751 GPR25O00155 361 aa20.3■□□□□ 0.84
LMNA-219ENST00000502751 VGLL4Q14135 290 aa20.3■□□□□ 0.84
LMNA-219ENST00000502751 PDE3AQ14432 1141 aa20.3■□□□□ 0.84
LMNA-219ENST00000502751 ZGPATQ8N5A5 531 aaKnown RBP20.3■□□□□ 0.84
LMNA-219ENST00000502751 PANK1Q8TE04 598 aa20.3■□□□□ 0.84
LMNA-219ENST00000502751 FAM151AQ8WW52 585 aa20.3■□□□□ 0.84
LMNA-219ENST00000502751 C1orf115Q9H7X2 142 aa20.3■□□□□ 0.84
LMNA-219ENST00000502751 USP40Q9NVE5 1235 aa20.3■□□□□ 0.84
LMNA-219ENST00000502751 PDS5AQ29RF7 1337 aaKnown RBP20.29■□□□□ 0.84
LMNA-219ENST00000502751 TESPA1A2RU30 521 aaPredicted RBP20.29■□□□□ 0.84
LMNA-219ENST00000502751 IGF2BP3O00425 579 aaKnown RBP eCLIP20.29■□□□□ 0.84
LMNA-219ENST00000502751 ALDH1A1P00352 501 aa20.29■□□□□ 0.84
LMNA-219ENST00000502751 NFIAQ12857 509 aa20.29■□□□□ 0.84
LMNA-219ENST00000502751 NOM1Q5C9Z4 860 aaKnown RBP20.29■□□□□ 0.84
LMNA-219ENST00000502751 CTU1Q7Z7A3 348 aaKnown RBP20.29■□□□□ 0.84
LMNA-219ENST00000502751 CNKSR2Q8WXI2 1034 aa20.29■□□□□ 0.84
LMNA-219ENST00000502751 OPTNQ96CV9 577 aa20.29■□□□□ 0.84
LMNA-219ENST00000502751 PTPN18Q99952 460 aa20.29■□□□□ 0.84
LMNA-219ENST00000502751 ABCF2Q9UG63 623 aa20.29■□□□□ 0.84
LMNA-219ENST00000502751 DDX19BQ9UMR2 479 aa20.29■□□□□ 0.84
LMNA-219ENST00000502751 TCP10Q12799 353 aa20.28■□□□□ 0.84
LMNA-219ENST00000502751 HMG20BQ9P0W2 317 aa20.28■□□□□ 0.84
LMNA-219ENST00000502751 GORABQ5T7V8 394 aa20.27■□□□□ 0.84
LMNA-219ENST00000502751 SPTY2D1Q68D10 685 aaPredicted RBP20.27■□□□□ 0.84
LMNA-219ENST00000502751 MIGA2Q7L4E1 593 aa20.27■□□□□ 0.84
LMNA-219ENST00000502751 HOOK2Q96ED9 719 aa20.27■□□□□ 0.84
LMNA-219ENST00000502751 FAM163AQ96GL9 167 aaPredicted RBP20.27■□□□□ 0.84
LMNA-219ENST00000502751 MS4A4AQ96JQ5 239 aa20.27■□□□□ 0.84
LMNA-219ENST00000502751 FAM198AQ9UFP1 575 aa20.27■□□□□ 0.84
LMNA-219ENST00000502751 CSADQ9Y600 493 aa20.27■□□□□ 0.84
LMNA-219ENST00000502751 GAKO14976 1311 aa20.27■□□□□ 0.83
LMNA-219ENST00000502751 SURF6O75683 361 aaKnown RBP20.26■□□□□ 0.83
LMNA-219ENST00000502751 ZFPM1Q8IX07 1006 aa20.26■□□□□ 0.83
LMNA-219ENST00000502751 SPATA5Q8NB90 893 aa20.26■□□□□ 0.83
LMNA-219ENST00000502751 ZKSCAN4Q969J2 545 aaPredicted RBP20.26■□□□□ 0.83
LMNA-219ENST00000502751 MYH13Q9UKX3 1938 aa20.25■□□□□ 0.83
LMNA-219ENST00000502751 DCAF15Q66K64 600 aa20.25■□□□□ 0.83
LMNA-219ENST00000502751 PI16Q6UXB8 463 aa20.25■□□□□ 0.83
LMNA-219ENST00000502751 TBC1D9Q6ZT07 1266 aa20.25■□□□□ 0.83
LMNA-219ENST00000502751 DZIP1Q86YF9 867 aaKnown RBP20.25■□□□□ 0.83
LMNA-219ENST00000502751 ZNF384Q8TF68 577 aa20.25■□□□□ 0.83
LMNA-219ENST00000502751 WRNIP1Q96S55 665 aa20.25■□□□□ 0.83
LMNA-219ENST00000502751 GPR108Q9NPR9 543 aa20.25■□□□□ 0.83
LMNA-219ENST00000502751 COG6Q9Y2V7 657 aa20.25■□□□□ 0.83
LMNA-219ENST00000502751 NOP58Q9Y2X3 529 aaKnown RBP20.25■□□□□ 0.83
LMNA-219ENST00000502751 SNCAIPQ9Y6H5 919 aa20.25■□□□□ 0.83
LMNA-219ENST00000502751 RPAP1Q9BWH6 1393 aaPredicted RBP20.24■□□□□ 0.83
LMNA-219ENST00000502751 FKTNO75072 461 aa20.24■□□□□ 0.83
LMNA-219ENST00000502751 ARID4AP29374 1257 aaPredicted RBP20.24■□□□□ 0.83
LMNA-219ENST00000502751 MECOMQ03112 1051 aa20.24■□□□□ 0.83
LMNA-219ENST00000502751 TNNI3KQ59H18 835 aa20.24■□□□□ 0.83
LMNA-219ENST00000502751 OTUD7BQ6GQQ9 843 aa20.24■□□□□ 0.83
LMNA-219ENST00000502751 ERICH6Q7L0X2 663 aa20.24■□□□□ 0.83
LMNA-219ENST00000502751 OTUD5Q96G74 571 aa20.24■□□□□ 0.83
LMNA-219ENST00000502751 IDI2Q9BXS1 227 aa20.24■□□□□ 0.83
LMNA-219ENST00000502751 ZNF341Q9BYN7 854 aa20.24■□□□□ 0.83
LMNA-219ENST00000502751 FPGT-TNNI3KV9GXZ4 949 aa20.24■□□□□ 0.83
LMNA-219ENST00000502751 SPDYE5A6NIY4 337 aa20.23■□□□□ 0.83
LMNA-219ENST00000502751 OS9Q13438 667 aaPredicted RBP20.23■□□□□ 0.83
LMNA-219ENST00000502751 SLF2Q8IX21 1173 aa20.23■□□□□ 0.83
LMNA-219ENST00000502751 BRI3BPQ8WY22 251 aa20.23■□□□□ 0.83
LMNA-219ENST00000502751 ZNF112Q9UJU3 913 aa20.23■□□□□ 0.83
LMNA-219ENST00000502751 GPR75-ASB3A0A0A6YYF3 556 aa20.22■□□□□ 0.83
LMNA-219ENST00000502751 UQCRFS1P1P0C7P4 283 aa20.22■□□□□ 0.83
LMNA-219ENST00000502751 INPP5BP32019 993 aa20.22■□□□□ 0.83
LMNA-219ENST00000502751 MCAMP43121 646 aa20.22■□□□□ 0.83
LMNA-219ENST00000502751 BTDP43251 543 aa20.22■□□□□ 0.83
LMNA-219ENST00000502751 RGS19P49795 217 aa20.22■□□□□ 0.83
LMNA-219ENST00000502751 GTF2A2P52657 109 aa20.22■□□□□ 0.83
LMNA-219ENST00000502751 PKN2Q16513 984 aaKnown RBP20.22■□□□□ 0.83
LMNA-219ENST00000502751 CEP85Q6P2H3 762 aa20.22■□□□□ 0.83
LMNA-219ENST00000502751 ERO1BQ86YB8 467 aa20.22■□□□□ 0.83
LMNA-219ENST00000502751 DBNDD2Q9BQY9 259 aa20.22■□□□□ 0.83
LMNA-219ENST00000502751 ENTPD3O75355 529 aa20.21■□□□□ 0.83
LMNA-219ENST00000502751 RGS3P49796 1198 aa20.21■□□□□ 0.83
LMNA-219ENST00000502751 CRHR2Q13324 411 aa20.21■□□□□ 0.83
LMNA-219ENST00000502751 SH3BP5LQ7L8J4 393 aa20.21■□□□□ 0.83
LMNA-219ENST00000502751 NSUN4Q96CB9 384 aaKnown RBP20.21■□□□□ 0.83
LMNA-219ENST00000502751 OTOFQ9HC10 1997 aa20.21■□□□□ 0.83
LMNA-219ENST00000502751 CCL15-CCL14A0A0B4J2E2 113 aa20.2■□□□□ 0.82
LMNA-219ENST00000502751 IRF6O14896 467 aa20.2■□□□□ 0.82
LMNA-219ENST00000502751 WDHD1O75717 1129 aaPredicted RBP20.2■□□□□ 0.82
LMNA-219ENST00000502751 CCL15Q16663 113 aa20.2■□□□□ 0.82
LMNA-219ENST00000502751 SNRKQ9NRH2 765 aa20.2■□□□□ 0.82
LMNA-219ENST00000502751 MROH7-TTC4A0A0A0MT08 1334 aa20.2■□□□□ 0.82
LMNA-219ENST00000502751 RRP1P56182 461 aaKnown RBP20.19■□□□□ 0.82
LMNA-219ENST00000502751 RHBDL3P58872 404 aa20.19■□□□□ 0.82
LMNA-219ENST00000502751 CCDC158Q5M9N0 1113 aa20.19■□□□□ 0.82
LMNA-219ENST00000502751 RPAP2Q8IXW5 612 aaPredicted RBP20.19■□□□□ 0.82
LMNA-219ENST00000502751 DDX4Q9NQI0 724 aaKnown RBP20.19■□□□□ 0.82
LMNA-219ENST00000502751 ZBTB40Q9NUA8 1239 aa20.19■□□□□ 0.82
LMNA-219ENST00000502751 RAI14Q9P0K7 980 aa20.19■□□□□ 0.82
LMNA-219ENST00000502751 HPS5Q9UPZ3 1129 aa20.19■□□□□ 0.82
LMNA-219ENST00000502751 MYH2Q9UKX2 1941 aa20.18■□□□□ 0.82
LMNA-219ENST00000502751 HMMRO75330 724 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms