RNA–Protein interactions for RNA: ENST00000496055.5

RABGGTB-213, Transcript of Rab geranylgeranyltransferase subunit beta, humanhuman

TSL 2

Gene RABGGTB, Length 3,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTB-213ENST00000496055 GPTP24298 496 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 PPP2R1AP30153 589 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 HTRA3P83110 453 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 GOLGA2Q08379 1002 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 TTC19Q6DKK2 380 aaPredicted RBP5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 KCNV1Q6PIU1 500 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 C2orf69Q8N8R5 385 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 LSM14AQ8ND56 463 aaKnown RBP5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 TRERF1Q96PN7 1200 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 RABL2AQ9UBK7 228 aaPredicted RBP5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 TRMT112Q9UI30 125 aaKnown RBP5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 CNTNAP1P78357 1384 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 TNRC6CQ9HCJ0 1690 aaKnown RBP5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 CDHR2Q9BYE9 1310 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 SLC7A5Q01650 507 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 POU5F1Q01860 360 aaKnown RBP5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 COL13A1Q5TAT6 717 aaPredicted RBP5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 REM2Q8IYK8 340 aaPredicted RBP5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 TDRD7Q8NHU6 1098 aaKnown RBP5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 C17orf50Q8WW18 174 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 CCDC47Q96A33 483 aaKnown RBP5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 DCPSQ96C86 337 aaKnown RBP5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 ZBTB3Q9H5J0 574 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 TMOD4Q9NZQ9 345 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 ZNRF3Q9ULT6 936 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 USP16Q9Y5T5 823 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 MRC1P22897 1456 aa5.36□□□□□ -1.55
RABGGTB-213ENST00000496055 IBTKQ9P2D0 1353 aaPredicted RBP5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 SHTN1A0MZ66 631 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 KIF5CO60282 957 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 HMMRO75330 724 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 ECM2O94769 699 aaPredicted RBP5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 CCDC175P0C221 793 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 ATXN8OSP0DMR3 200 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 MAP2K2P36507 400 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 TAX1BP1Q86VP1 789 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 NEK9Q8TD19 979 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 SREK1Q8WXA9 508 aaKnown RBP5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 NEUROD6Q96NK8 337 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 ZNF408Q9H9D4 720 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 BLOC1S6Q9UL45 172 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 C6orf229H3BNL8 230 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 ABCB7O75027 752 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 SLFN14P0C7P3 912 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 MYBL2P10244 700 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 INF2Q27J81 1249 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 STAG2Q8N3U4 1231 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 ITM2BQ9Y287 266 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 SH3TC1Q8TE82 1336 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 WDR33Q9C0J8 1336 aaKnown RBP5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 CCDC85CA6NKD9 419 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 NFXL1Q6ZNB6 911 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 PDILTQ8N807 584 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 CAPNS2Q96L46 248 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 GPR101Q96P66 508 aaPredicted RBP5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 POLR3CQ9BUI4 534 aaPredicted RBP5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 YIPF2Q9BWQ6 316 aa5.35□□□□□ -1.55
RABGGTB-213ENST00000496055 MAP1SQ66K74 1059 aaPredicted RBP5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 MYLK4Q86YV6 388 aaPredicted RBP5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 SULF1Q8IWU6 871 aa5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 CCDC102AQ96A19 550 aa5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 THOC1Q96FV9 657 aaKnown RBP5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 MMTAG2Q9BU76 263 aaKnown RBP5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 ZC3H12CQ9C0D7 883 aaKnown RBP5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 MKS1Q9NXB0 559 aa5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 SPDYE4A6NLX3 237 aa5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 TMCO5BA8MYB1 307 aa5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 HOXA10P31260 410 aaPredicted RBP5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 VEGFBP49765 207 aa5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 AIMP1Q12904 312 aaKnown RBP5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 NOGQ13253 232 aa5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 SART3Q15020 963 aaKnown RBP5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 GIGYF2Q6Y7W6 1299 aaKnown RBP5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 HS6ST3Q8IZP7 471 aa5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 CLASRPQ8N2M8 674 aaKnown RBP5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 SAMD3Q8N6K7 520 aa5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 SENP7Q9BQF6 1050 aa5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 DDX21Q9NR30 783 aaKnown RBP eCLIP5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 CEMIPQ8WUJ3 1361 aa5.34□□□□□ -1.55
RABGGTB-213ENST00000496055 RASSF10A6NK89 507 aa5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 EIF3JO75822 258 aaKnown RBP5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 CELF2O95319 508 aaKnown RBP5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 VDRP11473 427 aa5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 RPS12P25398 132 aaKnown RBP5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 PTK7Q13308 1070 aa5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 ZSCAN30Q86W11 494 aa5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 ANKRD13BQ86YJ7 626 aa5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 SP8Q8IXZ3 490 aa5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 VPS37AQ8NEZ2 397 aa5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 VEZTQ9HBM0 779 aa5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 SWAP70Q9UH65 585 aa5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 ATP6V0A2Q9Y487 856 aa5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 JRKLQ9Y4A0 524 aa5.34□□□□□ -1.56
RABGGTB-213ENST00000496055 N4BP2Q86UW6 1770 aaPredicted RBP5.33□□□□□ -1.56
RABGGTB-213ENST00000496055 GOLGA6L6A8MZA4 724 aa5.33□□□□□ -1.56
RABGGTB-213ENST00000496055 FZD9O00144 591 aa5.33□□□□□ -1.56
RABGGTB-213ENST00000496055 SLC27A2O14975 620 aa5.33□□□□□ -1.56
RABGGTB-213ENST00000496055 PER1O15534 1290 aaPredicted RBP5.33□□□□□ -1.56
RABGGTB-213ENST00000496055 TPPPO94811 219 aa5.33□□□□□ -1.56
RABGGTB-213ENST00000496055 LBX1P52954 281 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms