RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 ZNF330Q9Y3S2 320 aaPredicted RBP10.76□□□□□ -0.69
RPSA-209ENST00000495394 MSH6P52701 1360 aa10.76□□□□□ -0.69
RPSA-209ENST00000495394 TBX3O15119 743 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 CA8P35219 290 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 POSTNQ15063 836 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 MUM1Q2TAK8 710 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 LEKR1Q6ZMV7 388 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 C8orf48Q96LL4 319 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 UROC1Q96N76 676 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 VPS33BQ9H267 617 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 SENP2Q9HC62 589 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 EVLQ9UI08 416 aaPredicted RBP10.75□□□□□ -0.69
RPSA-209ENST00000495394 PLEKHH1Q9ULM0 1364 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.75□□□□□ -0.69
RPSA-209ENST00000495394 GRXCR2A6NFK2 248 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 PRPHP41219 470 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 TRAPPC10P48553 1259 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 SART3Q15020 963 aaKnown RBP10.75□□□□□ -0.69
RPSA-209ENST00000495394 TERF2Q15554 542 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 RNF20Q5VTR2 975 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 CPLX2Q6PUV4 134 aaKnown RBP10.75□□□□□ -0.69
RPSA-209ENST00000495394 NEK10Q6ZWH5 1172 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 NBPF15Q8N660 670 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 SCLT1Q96NL6 688 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 PRAM1Q96QH2 718 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 POGKQ9P215 609 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 RABGAP1Q9Y3P9 1069 aa10.75□□□□□ -0.69
RPSA-209ENST00000495394 V9GYY5 206 aaPredicted RBP10.75□□□□□ -0.69
RPSA-209ENST00000495394 SPTLC2O15270 562 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 C21orf2O43822 256 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 HNRNPCP07910 306 aaKnown RBP eCLIP10.74□□□□□ -0.69
RPSA-209ENST00000495394 VAMP1P23763 118 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 CCNCP24863 283 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 RAPGEF1Q13905 1077 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 HDGFL2Q7Z4V5 671 aaPredicted RBP10.74□□□□□ -0.69
RPSA-209ENST00000495394 SNX32Q86XE0 403 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 NUTM1Q86Y26 1132 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 PEX5LQ8IYB4 626 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 WDR66Q8TBY9 1149 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 NELL1Q92832 810 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 RBM33Q96EV2 1170 aaKnown RBP10.74□□□□□ -0.69
RPSA-209ENST00000495394 SPAG5Q96R06 1193 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 ZNF304Q9HCX3 659 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 ZNHIT6Q9NWK9 470 aaKnown RBP10.74□□□□□ -0.69
RPSA-209ENST00000495394 UBAP1Q9NZ09 502 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 LMCD1Q9NZU5 365 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 TFIP11Q9UBB9 837 aaKnown RBP10.74□□□□□ -0.69
RPSA-209ENST00000495394 SLC30A1Q9Y6M5 507 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 FMN2Q9NZ56 1722 aa10.74□□□□□ -0.69
RPSA-209ENST00000495394 LINC00854A0A1B0GVQ3 168 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 SNUPNO95149 360 aaKnown RBP10.73□□□□□ -0.69
RPSA-209ENST00000495394 SMC2O95347 1197 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 OAS2P29728 719 aaKnown RBP10.73□□□□□ -0.69
RPSA-209ENST00000495394 RABL6Q3YEC7 729 aaPredicted RBP10.73□□□□□ -0.69
RPSA-209ENST00000495394 ANKK1Q8NFD2 765 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 USP33Q8TEY7 942 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 DDX12PQ92771 950 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 UPF1Q92900 1129 aaKnown RBP eCLIP10.73□□□□□ -0.69
RPSA-209ENST00000495394 PBXIP1Q96AQ6 731 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 CAPS2Q9BXY5 557 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 C19orf44Q9H6X5 657 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 LRRFIP2Q9Y608 721 aaKnown RBP10.73□□□□□ -0.69
RPSA-209ENST00000495394 GOLGA2Q08379 1002 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 GRIK3Q13003 919 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 SPATS2Q86XZ4 545 aaKnown RBP10.73□□□□□ -0.69
RPSA-209ENST00000495394 FLCNQ8NFG4 579 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 TSR2Q969E8 191 aaKnown RBP10.73□□□□□ -0.69
RPSA-209ENST00000495394 ZBTB10Q96DT7 871 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 TESK2Q96S53 571 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 SH3GL1Q99961 368 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 TCHPQ9BT92 498 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 SPATS2LQ9NUQ6 558 aaKnown RBP10.73□□□□□ -0.69
RPSA-209ENST00000495394 GTF3C4Q9UKN8 822 aa10.73□□□□□ -0.69
RPSA-209ENST00000495394 FRAT2O75474 233 aaPredicted RBP10.72□□□□□ -0.69
RPSA-209ENST00000495394 FGFR1OPO95684 399 aaKnown RBP10.72□□□□□ -0.69
RPSA-209ENST00000495394 MYL1P05976 194 aa10.72□□□□□ -0.69
RPSA-209ENST00000495394 GNALP38405 381 aa10.72□□□□□ -0.69
RPSA-209ENST00000495394 CSE1LP55060 971 aaKnown RBP10.72□□□□□ -0.69
RPSA-209ENST00000495394 NUCB2P80303 420 aa10.72□□□□□ -0.69
RPSA-209ENST00000495394 GPSM2P81274 684 aa10.72□□□□□ -0.69
RPSA-209ENST00000495394 NOLC1Q14978 699 aaKnown RBP eCLIP10.72□□□□□ -0.692e-88■■■■■ 31
RPSA-209ENST00000495394 SPECC1Q5M775 1068 aa10.72□□□□□ -0.69
RPSA-209ENST00000495394 CFAP58Q5T655 872 aa10.72□□□□□ -0.69
RPSA-209ENST00000495394 ZNF449Q6P9G9 518 aa10.72□□□□□ -0.69
RPSA-209ENST00000495394 LRRCC1Q9C099 1032 aa10.72□□□□□ -0.69
RPSA-209ENST00000495394 MYBBP1AQ9BQG0 1328 aaKnown RBP10.72□□□□□ -0.69
RPSA-209ENST00000495394 EIF3FO00303 357 aaPredicted RBP10.72□□□□□ -0.69
RPSA-209ENST00000495394 MSNP26038 577 aaKnown RBP10.72□□□□□ -0.69
RPSA-209ENST00000495394 TBC1D8BQ0IIM8 1120 aa10.72□□□□□ -0.69
RPSA-209ENST00000495394 PDXDC2PQ6P474 469 aa10.72□□□□□ -0.69
RPSA-209ENST00000495394 PARP9Q8IXQ6 854 aa10.72□□□□□ -0.69
RPSA-209ENST00000495394 GSDMBQ8TAX9 411 aa10.72□□□□□ -0.69
RPSA-209ENST00000495394 ZSWIM4Q9H7M6 989 aa10.72□□□□□ -0.69
RPSA-209ENST00000495394 GNEQ9Y223 722 aaKnown RBP10.72□□□□□ -0.69
RPSA-209ENST00000495394 RNF123Q5XPI4 1314 aa10.71□□□□□ -0.69
RPSA-209ENST00000495394 CCDC163A0A0D9SF12 145 aa10.71□□□□□ -0.69
RPSA-209ENST00000495394 GTF2F1P35269 517 aaKnown RBP eCLIP10.71□□□□□ -0.69
RPSA-209ENST00000495394 SNX16P57768 344 aa10.71□□□□□ -0.69
RPSA-209ENST00000495394 PTPN14Q15678 1187 aa10.71□□□□□ -0.69
RPSA-209ENST00000495394 MUM1L1Q5H9M0 696 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms