RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 LDHDQ86WU2 507 aa9.15□□□□□ -0.94
VEGFA-214ENST00000493786 APOBEC3FQ8IUX4 373 aaKnown RBP9.15□□□□□ -0.94
VEGFA-214ENST00000493786 MIGA1Q8NAN2 632 aa9.15□□□□□ -0.94
VEGFA-214ENST00000493786 ZNF784Q8NCA9 323 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-214ENST00000493786 ZC3H15Q8WU90 426 aaKnown RBP9.15□□□□□ -0.94
VEGFA-214ENST00000493786 RUFY2Q8WXA3 655 aa9.15□□□□□ -0.94
VEGFA-214ENST00000493786 APPBP2Q92624 585 aa9.15□□□□□ -0.94
VEGFA-214ENST00000493786 DDRGK1Q96HY6 314 aa9.15□□□□□ -0.94
VEGFA-214ENST00000493786 TDRD3Q9H7E2 651 aaKnown RBP9.15□□□□□ -0.94
VEGFA-214ENST00000493786 USP40Q9NVE5 1235 aa9.15□□□□□ -0.94
VEGFA-214ENST00000493786 AATFQ9NY61 560 aaKnown RBP eCLIP9.15□□□□□ -0.94
VEGFA-214ENST00000493786 GGA3Q9NZ52 723 aa9.15□□□□□ -0.94
VEGFA-214ENST00000493786 TCRBV5S4A2TA0A5A2 114 aa9.14□□□□□ -0.95
VEGFA-214ENST00000493786 CLRN2A0PK11 232 aa9.14□□□□□ -0.95
VEGFA-214ENST00000493786 MBD4O95243 580 aa9.14□□□□□ -0.95
VEGFA-214ENST00000493786 EGFRP00533 1210 aa9.14□□□□□ -0.95
VEGFA-214ENST00000493786 USP5P45974 858 aa9.14□□□□□ -0.95
VEGFA-214ENST00000493786 SPDYE2Q495Y8 402 aa9.14□□□□□ -0.95
VEGFA-214ENST00000493786 ANGEL2Q5VTE6 544 aaKnown RBP9.14□□□□□ -0.95
VEGFA-214ENST00000493786 APOBEC3HQ6NTF7 200 aaKnown RBP9.14□□□□□ -0.95
VEGFA-214ENST00000493786 CDC42EP5Q6NZY7 148 aa9.14□□□□□ -0.95
VEGFA-214ENST00000493786 SULF1Q8IWU6 871 aa9.14□□□□□ -0.95
VEGFA-214ENST00000493786 TEX11Q8IYF3 940 aa9.14□□□□□ -0.95
VEGFA-214ENST00000493786 PRMT6Q96LA8 375 aaPredicted RBP9.14□□□□□ -0.95
VEGFA-214ENST00000493786 CRNKL1Q9BZJ0 848 aaKnown RBP9.14□□□□□ -0.95
VEGFA-214ENST00000493786 HELLSQ9NRZ9 838 aa9.14□□□□□ -0.95
VEGFA-214ENST00000493786 ZNF70Q9UC06 446 aaPredicted RBP9.14□□□□□ -0.95
VEGFA-214ENST00000493786 ZNF646O15015 1829 aaPredicted RBP9.14□□□□□ -0.95
VEGFA-214ENST00000493786 PITPNM2Q9BZ72 1349 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 DOCK2Q92608 1830 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 TCP10L2B9ZVM9 353 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 CDC45O75419 566 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 GNAT2P19087 354 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 HIRAP54198 1017 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-214ENST00000493786 PPP4CP60510 307 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 MCMDC2Q4G0Z9 681 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 ZMYM1Q5SVZ6 1142 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 CHADLQ6NUI6 762 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 CWC27Q6UX04 472 aaKnown RBP9.13□□□□□ -0.95
VEGFA-214ENST00000493786 KRT26Q7Z3Y9 468 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 ADGRA1Q86SQ6 560 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 AMOTL1Q8IY63 956 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 SH3RF3Q8TEJ3 882 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-214ENST00000493786 ZNF384Q8TF68 577 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 ZBED3Q96IU2 234 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-214ENST00000493786 PCDHAC2Q9Y5I4 1007 aa9.13□□□□□ -0.95
VEGFA-214ENST00000493786 RAD50Q92878 1312 aa9.12□□□□□ -0.95
VEGFA-214ENST00000493786 APPP05067 770 aa9.12□□□□□ -0.95
VEGFA-214ENST00000493786 NF2P35240 595 aa9.12□□□□□ -0.95
VEGFA-214ENST00000493786 CACNB3P54284 484 aa9.12□□□□□ -0.95
VEGFA-214ENST00000493786 DYNLL1P63167 89 aaKnown RBP9.12□□□□□ -0.95
VEGFA-214ENST00000493786 NMIQ13287 307 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-214ENST00000493786 PICALMQ13492 652 aa9.12□□□□□ -0.95
VEGFA-214ENST00000493786 FKBP1CQ5VVH2 108 aa9.12□□□□□ -0.95
VEGFA-214ENST00000493786 CDC37L1Q7L3B6 337 aa9.12□□□□□ -0.95
VEGFA-214ENST00000493786 ZSCAN29Q8IWY8 852 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-214ENST00000493786 SMC1BQ8NDV3 1235 aa9.12□□□□□ -0.95
VEGFA-214ENST00000493786 OSBP2Q969R2 916 aa9.12□□□□□ -0.95
VEGFA-214ENST00000493786 NACAP1Q9BZK3 213 aa9.12□□□□□ -0.95
VEGFA-214ENST00000493786 PUS7LQ9H0K6 701 aaKnown RBP9.12□□□□□ -0.95
VEGFA-214ENST00000493786 ARMT1Q9H993 441 aa9.12□□□□□ -0.95
VEGFA-214ENST00000493786 PPP2R3BQ9Y5P8 575 aa9.12□□□□□ -0.95
VEGFA-214ENST00000493786 SLC4A4Q9Y6R1 1079 aa9.12□□□□□ -0.95
VEGFA-214ENST00000493786 MYH2Q9UKX2 1941 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 ASTN2O75129 1339 aaPredicted RBP9.11□□□□□ -0.95
VEGFA-214ENST00000493786 A0A0D9SFI3 127 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 M0R2C6 588 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 KIF3CO14782 793 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 GPAA1O43292 621 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 ENTPD3O75355 529 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 TOMM70O94826 608 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 POTEIP0CG38 1075 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 POTEJP0CG39 1038 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 CHMLP26374 656 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 RHBDL3P58872 404 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 TCP10Q12799 353 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 SLFNL1Q499Z3 407 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 MAP1SQ66K74 1059 aaPredicted RBP9.11□□□□□ -0.95
VEGFA-214ENST00000493786 FAM83AQ86UY5 434 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 LCORLQ8N3X6 602 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 RBM46Q8TBY0 533 aaKnown RBP9.11□□□□□ -0.95
VEGFA-214ENST00000493786 TGFBRAP1Q8WUH2 860 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 HOOK2Q96ED9 719 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 FAM227BQ96M60 508 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 RIOK1Q9BRS2 568 aaKnown RBP9.11□□□□□ -0.95
VEGFA-214ENST00000493786 IDI2Q9BXS1 227 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 PGAP2Q9UHJ9 254 aa9.11□□□□□ -0.95
VEGFA-214ENST00000493786 CCDC171Q6TFL3 1326 aa9.1□□□□□ -0.95
VEGFA-214ENST00000493786 EIF5BO60841 1220 aaKnown RBP9.1□□□□□ -0.95
VEGFA-214ENST00000493786 NPM3O75607 178 aaKnown RBP9.1□□□□□ -0.95
VEGFA-214ENST00000493786 CHGBP05060 677 aa9.1□□□□□ -0.95
VEGFA-214ENST00000493786 HLA-DOAP06340 250 aa9.1□□□□□ -0.95
VEGFA-214ENST00000493786 TDO2P48775 406 aa9.1□□□□□ -0.95
VEGFA-214ENST00000493786 RASA3Q14644 834 aa9.1□□□□□ -0.95
VEGFA-214ENST00000493786 KIAA1211Q6ZU35 1233 aa9.1□□□□□ -0.95
VEGFA-214ENST00000493786 USP48Q86UV5 1035 aa9.1□□□□□ -0.95
VEGFA-214ENST00000493786 MAPKAPK5Q8IW41 473 aa9.1□□□□□ -0.95
VEGFA-214ENST00000493786 FAM151AQ8WW52 585 aa9.1□□□□□ -0.95
VEGFA-214ENST00000493786 STRBPQ96SI9 672 aaKnown RBP9.1□□□□□ -0.95
VEGFA-214ENST00000493786 SEC62Q99442 399 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms