RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 SPATA31C1P0DKV0 1188 aa9.55□□□□□ -0.88
SMG7-208ENST00000493609 TFE3P19532 575 aaPredicted RBP9.55□□□□□ -0.88
SMG7-208ENST00000493609 ZNF252P-AS1Q0IIN9 211 aa9.55□□□□□ -0.88
SMG7-208ENST00000493609 DUOXA2Q1HG44 320 aa9.55□□□□□ -0.88
SMG7-208ENST00000493609 MAP1SQ66K74 1059 aaPredicted RBP9.55□□□□□ -0.88
SMG7-208ENST00000493609 AGMOQ6ZNB7 445 aa9.55□□□□□ -0.88
SMG7-208ENST00000493609 KCNB2Q92953 911 aa9.55□□□□□ -0.88
SMG7-208ENST00000493609 EMILIN2Q9BXX0 1053 aa9.55□□□□□ -0.88
SMG7-208ENST00000493609 DDX41Q9UJV9 622 aaKnown RBP9.55□□□□□ -0.88
SMG7-208ENST00000493609 PF4P02776 101 aa9.54□□□□□ -0.88
SMG7-208ENST00000493609 LLGL2Q6P1M3 1020 aa9.54□□□□□ -0.88
SMG7-208ENST00000493609 IGF2-ASQ6U949 168 aa9.54□□□□□ -0.88
SMG7-208ENST00000493609 DCAF11Q8TEB1 546 aa9.54□□□□□ -0.88
SMG7-208ENST00000493609 SEMA6BQ9H3T3 888 aa9.54□□□□□ -0.88
SMG7-208ENST00000493609 CYP8B1Q9UNU6 501 aa9.54□□□□□ -0.88
SMG7-208ENST00000493609 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.53□□□□□ -0.88
SMG7-208ENST00000493609 EIF4EBP3O60516 100 aaPredicted RBP9.53□□□□□ -0.88
SMG7-208ENST00000493609 SELPP16109 830 aa9.53□□□□□ -0.88
SMG7-208ENST00000493609 GATA4P43694 442 aa9.53□□□□□ -0.88
SMG7-208ENST00000493609 RANGAP1P46060 587 aaPredicted RBP9.53□□□□□ -0.88
SMG7-208ENST00000493609 RPS26P62854 115 aaKnown RBP9.53□□□□□ -0.88
SMG7-208ENST00000493609 FAM160A1Q05DH4 1040 aa9.53□□□□□ -0.88
SMG7-208ENST00000493609 PWP1Q13610 501 aa9.53□□□□□ -0.88
SMG7-208ENST00000493609 LRRC14Q15048 493 aa9.53□□□□□ -0.88
SMG7-208ENST00000493609 RHOVQ96L33 236 aa9.53□□□□□ -0.88
SMG7-208ENST00000493609 CCDC86Q9H6F5 360 aaKnown RBP9.53□□□□□ -0.88
SMG7-208ENST00000493609 LMNB1P20700 586 aa9.52□□□□□ -0.89
SMG7-208ENST00000493609 PTPN11Q06124 597 aaPredicted RBP9.52□□□□□ -0.89
SMG7-208ENST00000493609 CAMK2GQ13555 558 aaPredicted RBP9.52□□□□□ -0.89
SMG7-208ENST00000493609 PDE3AQ14432 1141 aa9.52□□□□□ -0.89
SMG7-208ENST00000493609 KIAA1211Q6ZU35 1233 aa9.52□□□□□ -0.89
SMG7-208ENST00000493609 ACAD11Q709F0 780 aa9.52□□□□□ -0.89
SMG7-208ENST00000493609 WDR89Q96FK6 387 aaPredicted RBP9.52□□□□□ -0.89
SMG7-208ENST00000493609 KRTAP9-2Q9BYQ4 174 aa9.52□□□□□ -0.89
SMG7-208ENST00000493609 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.52□□□□□ -0.89
SMG7-208ENST00000493609 LIG1P18858 919 aa9.51□□□□□ -0.89
SMG7-208ENST00000493609 SEPT6Q14141 434 aa9.51□□□□□ -0.89
SMG7-208ENST00000493609 AGGF1Q8N302 714 aaeCLIP9.51□□□□□ -0.89
SMG7-208ENST00000493609 MRPL18Q9H0U6 180 aaKnown RBP9.51□□□□□ -0.89
SMG7-208ENST00000493609 ACBD3Q9H3P7 528 aa9.51□□□□□ -0.89
SMG7-208ENST00000493609 ADAMTS1Q9UHI8 967 aa9.51□□□□□ -0.89
SMG7-208ENST00000493609 ZNF862O60290 1169 aa9.5□□□□□ -0.89
SMG7-208ENST00000493609 ALX3O95076 343 aa9.5□□□□□ -0.89
SMG7-208ENST00000493609 EIF4A3P38919 411 aaKnown RBP9.5□□□□□ -0.89
SMG7-208ENST00000493609 ZNF654Q8IZM8 581 aa9.5□□□□□ -0.89
SMG7-208ENST00000493609 GPBAR1Q8TDU6 330 aa9.5□□□□□ -0.89
SMG7-208ENST00000493609 JARID2Q92833 1246 aaPredicted RBP9.5□□□□□ -0.89
SMG7-208ENST00000493609 RUSC1Q9BVN2 902 aa9.5□□□□□ -0.89
SMG7-208ENST00000493609 TGIF2Q9GZN2 237 aa9.5□□□□□ -0.89
SMG7-208ENST00000493609 MIR1-1HGQ9H1L0 117 aa9.5□□□□□ -0.89
SMG7-208ENST00000493609 USP21Q9UK80 565 aa9.5□□□□□ -0.89
SMG7-208ENST00000493609 GARTP22102 1010 aa9.49□□□□□ -0.89
SMG7-208ENST00000493609 LMNB2Q03252 620 aa9.49□□□□□ -0.89
SMG7-208ENST00000493609 EXOSC6Q5RKV6 272 aaKnown RBP9.49□□□□□ -0.89
SMG7-208ENST00000493609 SNAP47Q5SQN1 464 aa9.49□□□□□ -0.89
SMG7-208ENST00000493609 FBXL19Q6PCT2 694 aa9.49□□□□□ -0.89
SMG7-208ENST00000493609 BNC2Q6ZN30 1099 aaPredicted RBP9.49□□□□□ -0.89
SMG7-208ENST00000493609 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.49□□□□□ -0.89
SMG7-208ENST00000493609 TRIM42Q8IWZ5 723 aa9.49□□□□□ -0.89
SMG7-208ENST00000493609 GOLM1Q8NBJ4 401 aa9.49□□□□□ -0.89
SMG7-208ENST00000493609 ZNF296Q8WUU4 475 aaPredicted RBP9.49□□□□□ -0.89
SMG7-208ENST00000493609 GAL3ST3Q96A11 431 aa9.49□□□□□ -0.89
SMG7-208ENST00000493609 LENG1Q96BZ8 264 aaPredicted RBP9.49□□□□□ -0.89
SMG7-208ENST00000493609 ACSBG1Q96GR2 724 aa9.49□□□□□ -0.89
SMG7-208ENST00000493609 CCSER2Q9H7U1 834 aa9.49□□□□□ -0.89
SMG7-208ENST00000493609 TRIM37O94972 964 aa9.48□□□□□ -0.89
SMG7-208ENST00000493609 APBA3O96018 575 aa9.48□□□□□ -0.89
SMG7-208ENST00000493609 TNNI2P48788 182 aa9.48□□□□□ -0.89
SMG7-208ENST00000493609 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.48□□□□□ -0.89
SMG7-208ENST00000493609 SPON2Q9BUD6 331 aa9.48□□□□□ -0.89
SMG7-208ENST00000493609 CACNA2D2Q9NY47 1150 aa9.48□□□□□ -0.89
SMG7-208ENST00000493609 KRTAP9-6A0A140TA67 174 aa9.47□□□□□ -0.89
SMG7-208ENST00000493609 F8W735 103 aaPredicted RBP9.47□□□□□ -0.89
SMG7-208ENST00000493609 RSPO4Q2I0M5 234 aaPredicted RBP9.47□□□□□ -0.89
SMG7-208ENST00000493609 WDR18Q9BV38 432 aa9.47□□□□□ -0.89
SMG7-208ENST00000493609 TMPRSS13Q9BYE2 586 aa9.47□□□□□ -0.89
SMG7-208ENST00000493609 RAD18Q9NS91 495 aa9.47□□□□□ -0.89
SMG7-208ENST00000493609 KRT82Q9NSB4 513 aa9.47□□□□□ -0.89
SMG7-208ENST00000493609 PCDHA4Q9UN74 947 aa9.47□□□□□ -0.89
SMG7-208ENST00000493609 C9orf172C9J069 976 aa9.46□□□□□ -0.9
SMG7-208ENST00000493609 AOC2O75106 756 aa9.46□□□□□ -0.9
SMG7-208ENST00000493609 F13A1P00488 732 aa9.46□□□□□ -0.9
SMG7-208ENST00000493609 NUTM2GQ5VZR2 741 aa9.46□□□□□ -0.9
SMG7-208ENST00000493609 KIAA0825Q8IV33 1275 aa9.46□□□□□ -0.9
SMG7-208ENST00000493609 TMEM130Q8N3G9 435 aa9.46□□□□□ -0.9
SMG7-208ENST00000493609 RNF208Q9H0X6 261 aa9.46□□□□□ -0.9
SMG7-208ENST00000493609 AKTIPQ9H8T0 292 aa9.46□□□□□ -0.9
SMG7-208ENST00000493609 MEGF11A6BM72 1044 aa9.45□□□□□ -0.9
SMG7-208ENST00000493609 CDK8P49336 464 aa9.45□□□□□ -0.9
SMG7-208ENST00000493609 KIF4BQ2VIQ3 1234 aa9.45□□□□□ -0.9
SMG7-208ENST00000493609 AKAP4Q5JQC9 854 aa9.45□□□□□ -0.9
SMG7-208ENST00000493609 HP1BP3Q5SSJ5 553 aaPredicted RBP9.45□□□□□ -0.9
SMG7-208ENST00000493609 FBXO27Q8NI29 283 aa9.45□□□□□ -0.9
SMG7-208ENST00000493609 NACC1Q96RE7 527 aa9.45□□□□□ -0.9
SMG7-208ENST00000493609 KCNQ5Q9NR82 932 aa9.45□□□□□ -0.9
SMG7-208ENST00000493609 TPSG1Q9NRR2 321 aa9.45□□□□□ -0.9
SMG7-208ENST00000493609 SUPT16HQ9Y5B9 1047 aaKnown RBP9.45□□□□□ -0.9
SMG7-208ENST00000493609 GREM1O60565 184 aa9.44□□□□□ -0.9
SMG7-208ENST00000493609 DRD2P14416 443 aa9.44□□□□□ -0.9
SMG7-208ENST00000493609 PAK2Q13177 524 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 213.4 ms