RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 CDAN1Q8IWY9 1227 aa22.75■■□□□ 1.23
NDUFB4-204ENST00000491335 AIDAQ96BJ3 306 aa22.75■■□□□ 1.23
NDUFB4-204ENST00000491335 PPP1R12BO60237 982 aaPredicted RBP22.74■■□□□ 1.23
NDUFB4-204ENST00000491335 MECOMQ03112 1051 aa22.74■■□□□ 1.23
NDUFB4-204ENST00000491335 LDLRAD1Q5T700 205 aa22.74■■□□□ 1.23
NDUFB4-204ENST00000491335 RASAL3Q86YV0 1011 aa22.74■■□□□ 1.23
NDUFB4-204ENST00000491335 KIF1BPQ96EK5 621 aa22.74■■□□□ 1.23
NDUFB4-204ENST00000491335 ZNF512BQ96KM6 892 aaPredicted RBP22.74■■□□□ 1.23
NDUFB4-204ENST00000491335 RAB11FIP3O75154 756 aa22.73■■□□□ 1.23
NDUFB4-204ENST00000491335 MAP3K11Q16584 847 aa22.73■■□□□ 1.23
NDUFB4-204ENST00000491335 FAM83AQ86UY5 434 aa22.73■■□□□ 1.23
NDUFB4-204ENST00000491335 SLF2Q8IX21 1173 aa22.73■■□□□ 1.23
NDUFB4-204ENST00000491335 ZNF384Q8TF68 577 aa22.73■■□□□ 1.23
NDUFB4-204ENST00000491335 FAM163AQ96GL9 167 aaPredicted RBP22.73■■□□□ 1.23
NDUFB4-204ENST00000491335 USP40Q9NVE5 1235 aa22.73■■□□□ 1.23
NDUFB4-204ENST00000491335 USP2O75604 605 aaPredicted RBP22.72■■□□□ 1.23
NDUFB4-204ENST00000491335 KIF23Q02241 960 aaPredicted RBP22.72■■□□□ 1.23
NDUFB4-204ENST00000491335 RAI14Q9P0K7 980 aa22.72■■□□□ 1.23
NDUFB4-204ENST00000491335 LRP2BPQ9P2M1 347 aa22.72■■□□□ 1.23
NDUFB4-204ENST00000491335 GAKO14976 1311 aa22.72■■□□□ 1.23
NDUFB4-204ENST00000491335 ZAP70P43403 619 aa22.71■■□□□ 1.23
NDUFB4-204ENST00000491335 CLASRPQ8N2M8 674 aaKnown RBP22.71■■□□□ 1.23
NDUFB4-204ENST00000491335 NSUN4Q96CB9 384 aaKnown RBP22.71■■□□□ 1.23
NDUFB4-204ENST00000491335 BEGAINQ9BUH8 593 aa22.71■■□□□ 1.23
NDUFB4-204ENST00000491335 BCL11AQ9H165 835 aa22.71■■□□□ 1.23
NDUFB4-204ENST00000491335 MYO5AQ9Y4I1 1855 aaKnown RBP22.71■■□□□ 1.23
NDUFB4-204ENST00000491335 CYP2E1P05181 493 aaPredicted RBP22.7■■□□□ 1.22
NDUFB4-204ENST00000491335 NFIAQ12857 509 aa22.7■■□□□ 1.22
NDUFB4-204ENST00000491335 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.7■■□□□ 1.22
NDUFB4-204ENST00000491335 AK9Q5TCS8 1911 aa22.7■■□□□ 1.22
NDUFB4-204ENST00000491335 MROH7-TTC4A0A0A0MT08 1334 aa22.69■■□□□ 1.22
NDUFB4-204ENST00000491335 LDHCP07864 332 aa22.69■■□□□ 1.22
NDUFB4-204ENST00000491335 CTCFP49711 727 aaPredicted RBP22.69■■□□□ 1.22
NDUFB4-204ENST00000491335 GSTO1P78417 241 aa22.69■■□□□ 1.22
NDUFB4-204ENST00000491335 TCP10Q12799 353 aa22.69■■□□□ 1.22
NDUFB4-204ENST00000491335 FAM151AQ8WW52 585 aa22.69■■□□□ 1.22
NDUFB4-204ENST00000491335 CRBNQ96SW2 442 aa22.69■■□□□ 1.22
NDUFB4-204ENST00000491335 GPR75-ASB3A0A0A6YYF3 556 aa22.68■■□□□ 1.22
NDUFB4-204ENST00000491335 BTDP43251 543 aa22.68■■□□□ 1.22
NDUFB4-204ENST00000491335 IREB2P48200 963 aaKnown RBP22.68■■□□□ 1.22
NDUFB4-204ENST00000491335 SLC10A4Q96EP9 437 aa22.68■■□□□ 1.22
NDUFB4-204ENST00000491335 CLMNQ96JQ2 1002 aa22.68■■□□□ 1.22
NDUFB4-204ENST00000491335 FAM198AQ9UFP1 575 aa22.68■■□□□ 1.22
NDUFB4-204ENST00000491335 PCDHB15Q9Y5E8 787 aa22.68■■□□□ 1.22
NDUFB4-204ENST00000491335 IFIT2P09913 472 aaKnown RBP22.67■■□□□ 1.22
NDUFB4-204ENST00000491335 CSRNP1Q96S65 589 aa22.67■■□□□ 1.22
NDUFB4-204ENST00000491335 PIH1D3Q9NQM4 214 aaKnown RBP22.67■■□□□ 1.22
NDUFB4-204ENST00000491335 NDUFB9Q9Y6M9 179 aa22.67■■□□□ 1.22
NDUFB4-204ENST00000491335 HSPA8P11142 646 aaKnown RBP22.66■■□□□ 1.22
NDUFB4-204ENST00000491335 LBX1P52954 281 aa22.66■■□□□ 1.22
NDUFB4-204ENST00000491335 MKRN3Q13064 507 aaKnown RBP22.66■■□□□ 1.22
NDUFB4-204ENST00000491335 COL13A1Q5TAT6 717 aaPredicted RBP22.66■■□□□ 1.22
NDUFB4-204ENST00000491335 ZFPM1Q8IX07 1006 aa22.66■■□□□ 1.22
NDUFB4-204ENST00000491335 UNCXA6NJT0 531 aa22.65■■□□□ 1.22
NDUFB4-204ENST00000491335 RGS3P49796 1198 aa22.65■■□□□ 1.22
NDUFB4-204ENST00000491335 SPRYD7Q5W111 196 aa22.65■■□□□ 1.22
NDUFB4-204ENST00000491335 NAA16Q6N069 864 aaPredicted RBP22.65■■□□□ 1.22
NDUFB4-204ENST00000491335 ANKRD13AQ8IZ07 590 aa22.65■■□□□ 1.22
NDUFB4-204ENST00000491335 IDI2Q9BXS1 227 aa22.65■■□□□ 1.22
NDUFB4-204ENST00000491335 LRRCC1Q9C099 1032 aa22.65■■□□□ 1.22
NDUFB4-204ENST00000491335 DCTPP1Q9H773 170 aa22.65■■□□□ 1.22
NDUFB4-204ENST00000491335 TSKSQ9UJT2 592 aa22.65■■□□□ 1.22
NDUFB4-204ENST00000491335 RPAP1Q9BWH6 1393 aaPredicted RBP22.64■■□□□ 1.22
NDUFB4-204ENST00000491335 SMARCA5O60264 1052 aaPredicted RBP22.64■■□□□ 1.21
NDUFB4-204ENST00000491335 WDHD1O75717 1129 aaPredicted RBP22.64■■□□□ 1.21
NDUFB4-204ENST00000491335 RHBDL3P58872 404 aa22.64■■□□□ 1.21
NDUFB4-204ENST00000491335 MAP3K9P80192 1104 aa22.64■■□□□ 1.21
NDUFB4-204ENST00000491335 HOOK2Q96ED9 719 aa22.64■■□□□ 1.21
NDUFB4-204ENST00000491335 CA12O43570 354 aa22.63■■□□□ 1.21
NDUFB4-204ENST00000491335 ENTPD3O75355 529 aa22.63■■□□□ 1.21
NDUFB4-204ENST00000491335 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.63■■□□□ 1.21
NDUFB4-204ENST00000491335 MIGA2Q7L4E1 593 aa22.63■■□□□ 1.21
NDUFB4-204ENST00000491335 REM2Q8IYK8 340 aaPredicted RBP22.63■■□□□ 1.21
NDUFB4-204ENST00000491335 ANTXR1Q9H6X2 564 aa22.63■■□□□ 1.21
NDUFB4-204ENST00000491335 OTOFQ9HC10 1997 aa22.63■■□□□ 1.21
NDUFB4-204ENST00000491335 DCAF15Q66K64 600 aa22.62■■□□□ 1.21
NDUFB4-204ENST00000491335 WNK4Q96J92 1243 aa22.62■■□□□ 1.21
NDUFB4-204ENST00000491335 DDX4Q9NQI0 724 aaKnown RBP22.62■■□□□ 1.21
NDUFB4-204ENST00000491335 PRDM10Q9NQV6 1147 aa22.62■■□□□ 1.21
NDUFB4-204ENST00000491335 RFX7Q2KHR2 1363 aa22.62■■□□□ 1.21
NDUFB4-204ENST00000491335 IGSF3O75054 1194 aa22.61■■□□□ 1.21
NDUFB4-204ENST00000491335 IDH1O75874 414 aaKnown RBP22.61■■□□□ 1.21
NDUFB4-204ENST00000491335 PICALMQ13492 652 aa22.61■■□□□ 1.21
NDUFB4-204ENST00000491335 ADGRA1Q86SQ6 560 aa22.61■■□□□ 1.21
NDUFB4-204ENST00000491335 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.61■■□□□ 1.21
NDUFB4-204ENST00000491335 ELP3Q9H9T3 547 aa22.61■■□□□ 1.21
NDUFB4-204ENST00000491335 RNF186Q9NXI6 227 aa22.61■■□□□ 1.21
NDUFB4-204ENST00000491335 MAST2Q6P0Q8 1798 aa22.61■■□□□ 1.21
NDUFB4-204ENST00000491335 TRPA1O75762 1119 aa22.6■■□□□ 1.21
NDUFB4-204ENST00000491335 MAP4K4O95819 1239 aaPredicted RBP22.6■■□□□ 1.21
NDUFB4-204ENST00000491335 SH3BP5LQ7L8J4 393 aa22.6■■□□□ 1.21
NDUFB4-204ENST00000491335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.6■■□□□ 1.21
NDUFB4-204ENST00000491335 NOL10Q9BSC4 688 aaKnown RBP22.6■■□□□ 1.21
NDUFB4-204ENST00000491335 CYP7A1P22680 504 aa22.59■■□□□ 1.21
NDUFB4-204ENST00000491335 GJA5P36382 358 aa22.59■■□□□ 1.21
NDUFB4-204ENST00000491335 TM4SF4P48230 202 aa22.59■■□□□ 1.21
NDUFB4-204ENST00000491335 PPP4CP60510 307 aa22.59■■□□□ 1.21
NDUFB4-204ENST00000491335 VGLL4Q14135 290 aa22.59■■□□□ 1.21
NDUFB4-204ENST00000491335 ZSCAN29Q8IWY8 852 aaPredicted RBP22.59■■□□□ 1.21
NDUFB4-204ENST00000491335 SH3RF3Q8TEJ3 882 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms