RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 TRPA1O75762 1119 aa12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 OS9Q13438 667 aaPredicted RBP12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 RASGRF1Q13972 1273 aa12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 GORABQ5T7V8 394 aa12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 SPRYD7Q5W111 196 aa12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 FAM83AQ86UY5 434 aa12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 ANKRD13AQ8IZ07 590 aa12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 HOOK2Q96ED9 719 aa12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 TEPSINQ96N21 525 aa12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 TMEM39BQ9GZU3 492 aa12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 GPR108Q9NPR9 543 aa12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 FZD1Q9UP38 647 aa12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 EXOC6BQ9Y2D4 811 aa12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 DAGLAQ9Y4D2 1042 aa12.95□□□□□ -0.34
SCAMP4-208ENST00000489554 MYH13Q9UKX3 1938 aa12.94□□□□□ -0.34
SCAMP4-208ENST00000489554 USP2O75604 605 aaPredicted RBP12.94□□□□□ -0.34
SCAMP4-208ENST00000489554 ZBTB48P10074 688 aaPredicted RBP12.94□□□□□ -0.34
SCAMP4-208ENST00000489554 TM4SF4P48230 202 aa12.94□□□□□ -0.34
SCAMP4-208ENST00000489554 DIXDC1Q155Q3 683 aa12.94□□□□□ -0.34
SCAMP4-208ENST00000489554 SPTY2D1Q68D10 685 aaPredicted RBP12.94□□□□□ -0.34
SCAMP4-208ENST00000489554 SLF2Q8IX21 1173 aa12.94□□□□□ -0.34
SCAMP4-208ENST00000489554 RPAP1Q9BWH6 1393 aaPredicted RBP12.94□□□□□ -0.34
SCAMP4-208ENST00000489554 MANSC4A6NHS7 340 aaPredicted RBP12.93□□□□□ -0.34
SCAMP4-208ENST00000489554 SURF6O75683 361 aaKnown RBP12.93□□□□□ -0.34
SCAMP4-208ENST00000489554 UQCRFS1P1P0C7P4 283 aa12.93□□□□□ -0.34
SCAMP4-208ENST00000489554 CACNB3P54284 484 aa12.93□□□□□ -0.34
SCAMP4-208ENST00000489554 INHBEP58166 350 aa12.93□□□□□ -0.34
SCAMP4-208ENST00000489554 MKRN3Q13064 507 aaKnown RBP12.93□□□□□ -0.34
SCAMP4-208ENST00000489554 SKAP1Q86WV1 359 aa12.93□□□□□ -0.34
SCAMP4-208ENST00000489554 DZIP1Q86YF9 867 aaKnown RBP12.93□□□□□ -0.34
SCAMP4-208ENST00000489554 GCC1Q96CN9 775 aa12.93□□□□□ -0.34
SCAMP4-208ENST00000489554 CLMNQ96JQ2 1002 aa12.93□□□□□ -0.34
SCAMP4-208ENST00000489554 ABCF2Q9UG63 623 aa12.93□□□□□ -0.34
SCAMP4-208ENST00000489554 ARID4AP29374 1257 aaPredicted RBP12.92□□□□□ -0.34
SCAMP4-208ENST00000489554 NUCB1Q02818 461 aa12.92□□□□□ -0.34
SCAMP4-208ENST00000489554 TNNI3KQ59H18 835 aa12.92□□□□□ -0.34
SCAMP4-208ENST00000489554 CDC42EP5Q6NZY7 148 aa12.92□□□□□ -0.34
SCAMP4-208ENST00000489554 CDAN1Q8IWY9 1227 aa12.92□□□□□ -0.34
SCAMP4-208ENST00000489554 SPATA5Q8NB90 893 aa12.92□□□□□ -0.34
SCAMP4-208ENST00000489554 FAM151AQ8WW52 585 aa12.92□□□□□ -0.34
SCAMP4-208ENST00000489554 WNK4Q96J92 1243 aa12.92□□□□□ -0.34
SCAMP4-208ENST00000489554 HMG20BQ9P0W2 317 aa12.92□□□□□ -0.34
SCAMP4-208ENST00000489554 FPGT-TNNI3KV9GXZ4 949 aa12.92□□□□□ -0.34
SCAMP4-208ENST00000489554 GAKO14976 1311 aa12.91□□□□□ -0.34
SCAMP4-208ENST00000489554 CAPN15O75808 1086 aa12.91□□□□□ -0.34
SCAMP4-208ENST00000489554 ALDH1A1P00352 501 aa12.91□□□□□ -0.34
SCAMP4-208ENST00000489554 PDE4AP27815 886 aa12.91□□□□□ -0.34
SCAMP4-208ENST00000489554 MAP3K9P80192 1104 aa12.91□□□□□ -0.34
SCAMP4-208ENST00000489554 DCAF15Q66K64 600 aa12.91□□□□□ -0.34
SCAMP4-208ENST00000489554 ERICH6Q7L0X2 663 aa12.91□□□□□ -0.34
SCAMP4-208ENST00000489554 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
SCAMP4-208ENST00000489554 USP40Q9NVE5 1235 aa12.91□□□□□ -0.34
SCAMP4-208ENST00000489554 CSADQ9Y600 493 aa12.91□□□□□ -0.34
SCAMP4-208ENST00000489554 SALL3Q9BXA9 1300 aa12.9□□□□□ -0.34
SCAMP4-208ENST00000489554 AKAP11Q9UKA4 1901 aa12.9□□□□□ -0.34
SCAMP4-208ENST00000489554 SMARCA5O60264 1052 aaPredicted RBP12.9□□□□□ -0.34
SCAMP4-208ENST00000489554 RAB11FIP3O75154 756 aa12.9□□□□□ -0.34
SCAMP4-208ENST00000489554 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
SCAMP4-208ENST00000489554 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.9□□□□□ -0.34
SCAMP4-208ENST00000489554 ERC1Q8IUD2 1116 aa12.9□□□□□ -0.34
SCAMP4-208ENST00000489554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.9□□□□□ -0.34
SCAMP4-208ENST00000489554 RHPN1Q8TCX5 695 aa12.9□□□□□ -0.34
SCAMP4-208ENST00000489554 CFHR5Q9BXR6 569 aa12.9□□□□□ -0.34
SCAMP4-208ENST00000489554 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.9□□□□□ -0.34
SCAMP4-208ENST00000489554 LDHCP07864 332 aa12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 MCAMP43121 646 aa12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 GSTO1P78417 241 aa12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 MECOMQ03112 1051 aa12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 VGLL4Q14135 290 aa12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 HSP90AB4PQ58FF6 505 aa12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 NOM1Q5C9Z4 860 aaKnown RBP12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 TTC39AQ5SRH9 613 aa12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 OPTNQ96CV9 577 aa12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 ABHD8Q96I13 439 aa12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 ZNF512BQ96KM6 892 aaPredicted RBP12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 DBNDD2Q9BQY9 259 aa12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 IDI2Q9BXS1 227 aa12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 ELP3Q9H9T3 547 aa12.89□□□□□ -0.35
SCAMP4-208ENST00000489554 MROH7-TTC4A0A0A0MT08 1334 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 APBB1O00213 710 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 IGSF3O75054 1194 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 ENTPD3O75355 529 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 TBC1D8O95759 1140 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 MAP4K4O95819 1239 aaPredicted RBP12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 GJA5P36382 358 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 TCP10Q12799 353 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 NFIAQ12857 509 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 DGKZQ13574 1117 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 ANKRD45Q5TZF3 282 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 OTUD7BQ6GQQ9 843 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 PI16Q6UXB8 463 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 CHD1LQ86WJ1 897 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 IFNL1Q8IU54 200 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 OTUD7AQ8TE49 926 aaPredicted RBP12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 KIF1BPQ96EK5 621 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 WRNIP1Q96S55 665 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 ZNF341Q9BYN7 854 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 LRRCC1Q9C099 1032 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 MCOLN1Q9GZU1 580 aa12.88□□□□□ -0.35
SCAMP4-208ENST00000489554 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms