RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 KIAA2012Q0VF49 1180 aa21.58■■□□□ 1.04
COL16A1-215ENST00000488897 ME3Q16798 604 aa21.58■■□□□ 1.04
COL16A1-215ENST00000488897 FBXO33Q7Z6M2 555 aa21.58■■□□□ 1.04
COL16A1-215ENST00000488897 PDCL3Q9H2J4 239 aa21.58■■□□□ 1.04
COL16A1-215ENST00000488897 COL1A1P02452 1464 aaPredicted RBP21.57■■□□□ 1.04
COL16A1-215ENST00000488897 FER1L6Q2WGJ9 1857 aa21.57■■□□□ 1.04
COL16A1-215ENST00000488897 IARSP41252 1262 aaKnown RBP21.57■■□□□ 1.04
COL16A1-215ENST00000488897 GTF2IP78347 998 aa21.57■■□□□ 1.04
COL16A1-215ENST00000488897 NMIQ13287 307 aaPredicted RBP21.57■■□□□ 1.04
COL16A1-215ENST00000488897 RNF20Q5VTR2 975 aa21.57■■□□□ 1.04
COL16A1-215ENST00000488897 GPR108Q9NPR9 543 aa21.57■■□□□ 1.04
COL16A1-215ENST00000488897 DNM1Q05193 864 aaKnown RBP21.57■■□□□ 1.04
COL16A1-215ENST00000488897 HMG20BQ9P0W2 317 aa21.57■■□□□ 1.04
COL16A1-215ENST00000488897 ZBTB12Q9Y330 459 aaPredicted RBP21.57■■□□□ 1.04
COL16A1-215ENST00000488897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.57■■□□□ 1.04
COL16A1-215ENST00000488897 F8W031 263 aaPredicted RBP21.56■■□□□ 1.04
COL16A1-215ENST00000488897 ANKRD1Q15327 319 aa21.56■■□□□ 1.04
COL16A1-215ENST00000488897 CCDC158Q5M9N0 1113 aa21.56■■□□□ 1.04
COL16A1-215ENST00000488897 PSMD1Q99460 953 aa21.56■■□□□ 1.04
COL16A1-215ENST00000488897 RNF181Q9P0P0 153 aa21.56■■□□□ 1.04
COL16A1-215ENST00000488897 FAM227BQ96M60 508 aa21.56■■□□□ 1.04
COL16A1-215ENST00000488897 USP25Q9UHP3 1055 aa21.56■■□□□ 1.04
COL16A1-215ENST00000488897 SLC27A2O14975 620 aa21.55■■□□□ 1.04
COL16A1-215ENST00000488897 CC2D2BQ6DHV5 1058 aa21.55■■□□□ 1.04
COL16A1-215ENST00000488897 ARFGEF1Q9Y6D6 1849 aa21.55■■□□□ 1.04
COL16A1-215ENST00000488897 SCN9AQ15858 1988 aa21.55■■□□□ 1.04
COL16A1-215ENST00000488897 GOLIM4O00461 696 aa21.55■■□□□ 1.04
COL16A1-215ENST00000488897 PDCP20941 246 aa21.55■■□□□ 1.04
COL16A1-215ENST00000488897 ST3GAL1Q11201 340 aa21.55■■□□□ 1.04
COL16A1-215ENST00000488897 ALDH8A1Q9H2A2 487 aaPredicted RBP21.55■■□□□ 1.04
COL16A1-215ENST00000488897 ABCF2Q9UG63 623 aa21.55■■□□□ 1.04
COL16A1-215ENST00000488897 TPCN1Q9ULQ1 816 aa21.55■■□□□ 1.04
COL16A1-215ENST00000488897 VPS37CA5D8V6 355 aaPredicted RBP21.54■■□□□ 1.04
COL16A1-215ENST00000488897 ADCY5O95622 1261 aa21.54■■□□□ 1.04
COL16A1-215ENST00000488897 C9orf131Q5VYM1 1079 aa21.54■■□□□ 1.04
COL16A1-215ENST00000488897 LARP1BQ659C4 914 aaKnown RBP21.54■■□□□ 1.04
COL16A1-215ENST00000488897 FSD1Q9BTV5 496 aa21.54■■□□□ 1.04
COL16A1-215ENST00000488897 FUCA2Q9BTY2 467 aa21.54■■□□□ 1.04
COL16A1-215ENST00000488897 MED23Q9ULK4 1368 aa21.54■■□□□ 1.04
COL16A1-215ENST00000488897 SHTN1A0MZ66 631 aa21.54■■□□□ 1.04
COL16A1-215ENST00000488897 SASS6Q6UVJ0 657 aa21.54■■□□□ 1.04
COL16A1-215ENST00000488897 BLOC1S2Q6QNY1 142 aa21.53■■□□□ 1.04
COL16A1-215ENST00000488897 ZNF804AQ7Z570 1209 aa21.53■■□□□ 1.04
COL16A1-215ENST00000488897 EYA3Q99504 573 aa21.53■■□□□ 1.04
COL16A1-215ENST00000488897 UQCRHLA0A096LP55 91 aa21.53■■□□□ 1.04
COL16A1-215ENST00000488897 KDM4AO75164 1064 aa21.53■■□□□ 1.04
COL16A1-215ENST00000488897 UQCRHP07919 91 aa21.53■■□□□ 1.04
COL16A1-215ENST00000488897 TPRNQ4KMQ1 711 aa21.53■■□□□ 1.04
COL16A1-215ENST00000488897 SOGA3Q5TF21 947 aa21.53■■□□□ 1.04
COL16A1-215ENST00000488897 NECAB1Q8N987 351 aa21.53■■□□□ 1.04
COL16A1-215ENST00000488897 TTLL5Q6EMB2 1281 aa21.52■■□□□ 1.04
COL16A1-215ENST00000488897 SPATA5Q8NB90 893 aa21.52■■□□□ 1.04
COL16A1-215ENST00000488897 KRT85P78386 507 aa21.51■■□□□ 1.03
COL16A1-215ENST00000488897 CERS5Q8N5B7 392 aa21.51■■□□□ 1.03
COL16A1-215ENST00000488897 TDRD7Q8NHU6 1098 aaKnown RBP21.51■■□□□ 1.03
COL16A1-215ENST00000488897 PIH1D3Q9NQM4 214 aaKnown RBP21.51■■□□□ 1.03
COL16A1-215ENST00000488897 GJA3Q9Y6H8 435 aa21.51■■□□□ 1.03
COL16A1-215ENST00000488897 ZNF541Q9H0D2 1346 aa21.51■■□□□ 1.03
COL16A1-215ENST00000488897 A0A0D9SFI3 127 aa21.51■■□□□ 1.03
COL16A1-215ENST00000488897 PRDX5P30044 214 aa21.51■■□□□ 1.03
COL16A1-215ENST00000488897 GIMAP6Q6P9H5 292 aa21.51■■□□□ 1.03
COL16A1-215ENST00000488897 PCDHAC2Q9Y5I4 1007 aa21.51■■□□□ 1.03
COL16A1-215ENST00000488897 MYO5AQ9Y4I1 1855 aaKnown RBP21.51■■□□□ 1.03
COL16A1-215ENST00000488897 CXCL9Q07325 125 aa21.5■■□□□ 1.03
COL16A1-215ENST00000488897 TSGA10IPQ3SY00 556 aa21.5■■□□□ 1.03
COL16A1-215ENST00000488897 NIM1KQ8IY84 436 aa21.5■■□□□ 1.03
COL16A1-215ENST00000488897 JDP2Q8WYK2 163 aa21.5■■□□□ 1.03
COL16A1-215ENST00000488897 MAP7D2Q96T17 732 aa21.5■■□□□ 1.03
COL16A1-215ENST00000488897 PSMD14O00487 310 aa21.5■■□□□ 1.03
COL16A1-215ENST00000488897 DYNC1I1O14576 645 aa21.5■■□□□ 1.03
COL16A1-215ENST00000488897 LMNB1P20700 586 aa21.5■■□□□ 1.03
COL16A1-215ENST00000488897 RPS6KB1P23443 525 aa21.5■■□□□ 1.03
COL16A1-215ENST00000488897 ELP1O95163 1332 aa21.5■■□□□ 1.03
COL16A1-215ENST00000488897 ATP5JP18859 108 aa21.49■■□□□ 1.03
COL16A1-215ENST00000488897 SUPT20HQ8NEM7 779 aa21.49■■□□□ 1.03
COL16A1-215ENST00000488897 PIBF1Q8WXW3 757 aa21.49■■□□□ 1.03
COL16A1-215ENST00000488897 COA1Q9GZY4 146 aa21.49■■□□□ 1.03
COL16A1-215ENST00000488897 IL1R1P14778 569 aa21.49■■□□□ 1.03
COL16A1-215ENST00000488897 ARID4AP29374 1257 aaPredicted RBP21.49■■□□□ 1.03
COL16A1-215ENST00000488897 SBF1O95248 1867 aa21.49■■□□□ 1.03
COL16A1-215ENST00000488897 CCDC192P0DO97 292 aa21.48■■□□□ 1.03
COL16A1-215ENST00000488897 SCNN1DP51172 638 aa21.48■■□□□ 1.03
COL16A1-215ENST00000488897 KIAA0825Q8IV33 1275 aa21.48■■□□□ 1.03
COL16A1-215ENST00000488897 AKAP11Q9UKA4 1901 aa21.48■■□□□ 1.03
COL16A1-215ENST00000488897 DDNO94850 711 aaPredicted RBP21.48■■□□□ 1.03
COL16A1-215ENST00000488897 IDH1O75874 414 aaKnown RBP21.47■■□□□ 1.03
COL16A1-215ENST00000488897 KRT32Q14532 448 aa21.47■■□□□ 1.03
COL16A1-215ENST00000488897 MFSD14BQ5SR56 506 aa21.47■■□□□ 1.03
COL16A1-215ENST00000488897 ZNF526Q8TF50 670 aaPredicted RBP21.47■■□□□ 1.03
COL16A1-215ENST00000488897 SCAF8Q9UPN6 1271 aaKnown RBP21.47■■□□□ 1.03
COL16A1-215ENST00000488897 C15orf52Q6ZUT6 534 aaKnown RBP21.47■■□□□ 1.03
COL16A1-215ENST00000488897 PAG1Q9NWQ8 432 aa21.47■■□□□ 1.03
COL16A1-215ENST00000488897 ZNRF3Q9ULT6 936 aa21.47■■□□□ 1.03
COL16A1-215ENST00000488897 DIXDC1Q155Q3 683 aa21.46■■□□□ 1.03
COL16A1-215ENST00000488897 TTC6Q86TZ1 520 aa21.46■■□□□ 1.03
COL16A1-215ENST00000488897 ZNF384Q8TF68 577 aa21.46■■□□□ 1.03
COL16A1-215ENST00000488897 HAUS7Q99871 368 aa21.46■■□□□ 1.03
COL16A1-215ENST00000488897 GNL3LQ9NVN8 582 aaKnown RBP21.46■■□□□ 1.03
COL16A1-215ENST00000488897 ARAP2Q8WZ64 1704 aa21.46■■□□□ 1.03
COL16A1-215ENST00000488897 TPM3P06753 285 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms