RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 SEMA3EO15041 775 aa13.07□□□□□ -0.32
DDX56-212ENST00000485367 IREB2P48200 963 aaKnown RBP13.07□□□□□ -0.32
DDX56-212ENST00000485367 RGS3P49796 1198 aa13.07□□□□□ -0.32
DDX56-212ENST00000485367 G3BP1Q13283 466 aaKnown RBP eCLIP13.07□□□□□ -0.325e-8■□□□□ 8.8
DDX56-212ENST00000485367 MAP3K11Q16584 847 aa13.07□□□□□ -0.32
DDX56-212ENST00000485367 HHIPL2Q6UWX4 724 aa13.07□□□□□ -0.32
DDX56-212ENST00000485367 CLMNQ96JQ2 1002 aa13.07□□□□□ -0.32
DDX56-212ENST00000485367 NEUROD6Q96NK8 337 aa13.07□□□□□ -0.32
DDX56-212ENST00000485367 TMEM39BQ9GZU3 492 aa13.07□□□□□ -0.32
DDX56-212ENST00000485367 C1orf115Q9H7X2 142 aa13.07□□□□□ -0.32
DDX56-212ENST00000485367 TMOD2Q9NZR1 351 aa13.07□□□□□ -0.32
DDX56-212ENST00000485367 USP2O75604 605 aaPredicted RBP13.07□□□□□ -0.32
DDX56-212ENST00000485367 LDHBP07195 334 aaKnown RBP13.07□□□□□ -0.32
DDX56-212ENST00000485367 APOBEC3HQ6NTF7 200 aaKnown RBP13.07□□□□□ -0.32
DDX56-212ENST00000485367 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
DDX56-212ENST00000485367 XAGE2Q96GT9 111 aa13.07□□□□□ -0.32
DDX56-212ENST00000485367 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.07□□□□□ -0.32
DDX56-212ENST00000485367 PRDX5P30044 214 aa13.06□□□□□ -0.32
DDX56-212ENST00000485367 MVPQ14764 893 aaKnown RBP13.06□□□□□ -0.32
DDX56-212ENST00000485367 DIXDC1Q155Q3 683 aa13.06□□□□□ -0.32
DDX56-212ENST00000485367 GORABQ5T7V8 394 aa13.06□□□□□ -0.32
DDX56-212ENST00000485367 SPRYD7Q5W111 196 aa13.06□□□□□ -0.32
DDX56-212ENST00000485367 TEPSINQ96N21 525 aa13.06□□□□□ -0.32
DDX56-212ENST00000485367 UPF2Q9HAU5 1272 aaKnown RBP13.06□□□□□ -0.32
DDX56-212ENST00000485367 RRP9O43818 475 aaKnown RBP13.05□□□□□ -0.32
DDX56-212ENST00000485367 ATP8B2P98198 1209 aa13.05□□□□□ -0.32
DDX56-212ENST00000485367 OS9Q13438 667 aaPredicted RBP13.05□□□□□ -0.32
DDX56-212ENST00000485367 PANK1Q8TE04 598 aa13.05□□□□□ -0.32
DDX56-212ENST00000485367 UNCXA6NJT0 531 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 ZBTB7BO15156 539 aaPredicted RBP13.04□□□□□ -0.32
DDX56-212ENST00000485367 TM4SF4P48230 202 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 SREBF2Q12772 1141 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 RASGRF1Q13972 1273 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 ANKRD13AQ8IZ07 590 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 ABHD8Q96I13 439 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 WNK4Q96J92 1243 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 ANTXR1Q9H6X2 564 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 ABCF2Q9UG63 623 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 DAGLAQ9Y4D2 1042 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 SALL1Q9NSC2 1324 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 POLA2Q14181 598 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 FKBP1CQ5VVH2 108 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 ZGPATQ8N5A5 531 aaKnown RBP13.04□□□□□ -0.32
DDX56-212ENST00000485367 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
DDX56-212ENST00000485367 ISY1Q9ULR0 285 aaKnown RBP13.04□□□□□ -0.32
DDX56-212ENST00000485367 SURF6O75683 361 aaKnown RBP13.03□□□□□ -0.32
DDX56-212ENST00000485367 TBC1D8O95759 1140 aa13.03□□□□□ -0.32
DDX56-212ENST00000485367 DGKZQ13574 1117 aa13.03□□□□□ -0.32
DDX56-212ENST00000485367 CDC42EP5Q6NZY7 148 aa13.03□□□□□ -0.32
DDX56-212ENST00000485367 FAM83AQ86UY5 434 aa13.03□□□□□ -0.32
DDX56-212ENST00000485367 ELP3Q9H9T3 547 aa13.03□□□□□ -0.32
DDX56-212ENST00000485367 AK9Q5TCS8 1911 aa13.03□□□□□ -0.32
DDX56-212ENST00000485367 MYH2Q9UKX2 1941 aa13.03□□□□□ -0.32
DDX56-212ENST00000485367 OTOFQ9HC10 1997 aa13.03□□□□□ -0.32
DDX56-212ENST00000485367 MANSC4A6NHS7 340 aaPredicted RBP13.02□□□□□ -0.32
DDX56-212ENST00000485367 ZBTB22O15209 634 aa13.02□□□□□ -0.32
DDX56-212ENST00000485367 ZBTB48P10074 688 aaPredicted RBP13.02□□□□□ -0.32
DDX56-212ENST00000485367 SPTY2D1Q68D10 685 aaPredicted RBP13.02□□□□□ -0.32
DDX56-212ENST00000485367 DZIP1Q86YF9 867 aaKnown RBP13.02□□□□□ -0.32
DDX56-212ENST00000485367 MCOLN1Q9GZU1 580 aa13.02□□□□□ -0.32
DDX56-212ENST00000485367 USP40Q9NVE5 1235 aa13.02□□□□□ -0.32
DDX56-212ENST00000485367 PDS5AQ29RF7 1337 aaKnown RBP13.02□□□□□ -0.32
DDX56-212ENST00000485367 FSD2A1L4K1 749 aa13.02□□□□□ -0.33
DDX56-212ENST00000485367 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
DDX56-212ENST00000485367 TCP10Q12799 353 aa13.02□□□□□ -0.33
DDX56-212ENST00000485367 HMG20BQ9P0W2 317 aa13.02□□□□□ -0.33
DDX56-212ENST00000485367 CLCN1P35523 988 aa13.01□□□□□ -0.33
DDX56-212ENST00000485367 GJA5P36382 358 aa13.01□□□□□ -0.33
DDX56-212ENST00000485367 INHBEP58166 350 aa13.01□□□□□ -0.33
DDX56-212ENST00000485367 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.01□□□□□ -0.33
DDX56-212ENST00000485367 SPATA5Q8NB90 893 aa13.01□□□□□ -0.33
DDX56-212ENST00000485367 FAM151AQ8WW52 585 aa13.01□□□□□ -0.33
DDX56-212ENST00000485367 OPTNQ96CV9 577 aa13.01□□□□□ -0.33
DDX56-212ENST00000485367 HOOK2Q96ED9 719 aa13.01□□□□□ -0.33
DDX56-212ENST00000485367 TBC1D32Q96NH3 1257 aa13.01□□□□□ -0.33
DDX56-212ENST00000485367 CSADQ9Y600 493 aa13.01□□□□□ -0.33
DDX56-212ENST00000485367 GOLGA6L3A6NEY3 463 aa13□□□□□ -0.33
DDX56-212ENST00000485367 CCDC85CA6NKD9 419 aa13□□□□□ -0.33
DDX56-212ENST00000485367 NFIAQ12857 509 aa13□□□□□ -0.33
DDX56-212ENST00000485367 VGLL4Q14135 290 aa13□□□□□ -0.33
DDX56-212ENST00000485367 PI16Q6UXB8 463 aa13□□□□□ -0.33
DDX56-212ENST00000485367 TBC1D9Q6ZT07 1266 aa13□□□□□ -0.33
DDX56-212ENST00000485367 SLF2Q8IX21 1173 aa13□□□□□ -0.33
DDX56-212ENST00000485367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13□□□□□ -0.33
DDX56-212ENST00000485367 GPR108Q9NPR9 543 aa13□□□□□ -0.33
DDX56-212ENST00000485367 IGHDP01880 384 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 UQCRFS1P1P0C7P4 283 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 TNNI3KQ59H18 835 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 DCAF15Q66K64 600 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 CEP85Q6P2H3 762 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 MIGA2Q7L4E1 593 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 IFNL1Q8IU54 200 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 WRNIP1Q96S55 665 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 RRAGDQ9NQL2 400 aaPredicted RBP12.99□□□□□ -0.33
DDX56-212ENST00000485367 FPGT-TNNI3KV9GXZ4 949 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 RPAP1Q9BWH6 1393 aaPredicted RBP12.99□□□□□ -0.33
DDX56-212ENST00000485367 GAKO14976 1311 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 ALDH1A1P00352 501 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 ARID4AP29374 1257 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms