RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 IFIT2P09913 472 aaKnown RBP14.96□□□□□ -0.01
PTPRF-213ENST00000481019 ADGRA1Q86SQ6 560 aa14.96□□□□□ -0.01
PTPRF-213ENST00000481019 ZFPM1Q8IX07 1006 aa14.96□□□□□ -0.01
PTPRF-213ENST00000481019 ZGPATQ8N5A5 531 aaKnown RBP14.96□□□□□ -0.01
PTPRF-213ENST00000481019 C2orf69Q8N8R5 385 aa14.96□□□□□ -0.01
PTPRF-213ENST00000481019 EDC3Q96F86 508 aaKnown RBP14.96□□□□□ -0.01
PTPRF-213ENST00000481019 CAPNS2Q96L46 248 aa14.96□□□□□ -0.01
PTPRF-213ENST00000481019 RAI14Q9P0K7 980 aa14.96□□□□□ -0.01
PTPRF-213ENST00000481019 MAST2Q6P0Q8 1798 aa14.96□□□□□ -0.02
PTPRF-213ENST00000481019 THSD7BQ9C0I4 1608 aa14.95□□□□□ -0.02
PTPRF-213ENST00000481019 MROH7-TTC4A0A0A0MT08 1334 aa14.95□□□□□ -0.02
PTPRF-213ENST00000481019 DOCK2Q92608 1830 aa14.95□□□□□ -0.02
PTPRF-213ENST00000481019 FAM155AB1AL88 458 aaPredicted RBP14.95□□□□□ -0.02
PTPRF-213ENST00000481019 TSHZ3Q63HK5 1081 aa14.95□□□□□ -0.02
PTPRF-213ENST00000481019 SPTY2D1Q68D10 685 aaPredicted RBP14.95□□□□□ -0.02
PTPRF-213ENST00000481019 PAXIP1Q6ZW49 1069 aaPredicted RBP14.95□□□□□ -0.02
PTPRF-213ENST00000481019 OTUD7AQ8TE49 926 aaPredicted RBP14.95□□□□□ -0.02
PTPRF-213ENST00000481019 FAM163AQ96GL9 167 aaPredicted RBP14.95□□□□□ -0.02
PTPRF-213ENST00000481019 USP40Q9NVE5 1235 aa14.95□□□□□ -0.02
PTPRF-213ENST00000481019 LRP2BPQ9P2M1 347 aa14.95□□□□□ -0.02
PTPRF-213ENST00000481019 FAM198AQ9UFP1 575 aa14.95□□□□□ -0.02
PTPRF-213ENST00000481019 RFX7Q2KHR2 1363 aa14.95□□□□□ -0.02
PTPRF-213ENST00000481019 IGHDP01880 384 aa14.94□□□□□ -0.02
PTPRF-213ENST00000481019 BTDP43251 543 aa14.94□□□□□ -0.02
PTPRF-213ENST00000481019 RHBDL3P58872 404 aa14.94□□□□□ -0.02
PTPRF-213ENST00000481019 DDX4Q9NQI0 724 aaKnown RBP14.94□□□□□ -0.02
PTPRF-213ENST00000481019 PPP2R3BQ9Y5P8 575 aa14.94□□□□□ -0.02
PTPRF-213ENST00000481019 GPR75-ASB3A0A0A6YYF3 556 aa14.93□□□□□ -0.02
PTPRF-213ENST00000481019 WDHD1O75717 1129 aaPredicted RBP14.93□□□□□ -0.02
PTPRF-213ENST00000481019 SLURP2P0DP57 97 aa14.93□□□□□ -0.02
PTPRF-213ENST00000481019 TCP10Q12799 353 aa14.93□□□□□ -0.02
PTPRF-213ENST00000481019 HDAC1Q13547 482 aaPredicted RBP14.93□□□□□ -0.02
PTPRF-213ENST00000481019 SH3BP5LQ7L8J4 393 aa14.93□□□□□ -0.02
PTPRF-213ENST00000481019 HHIPL1Q96JK4 782 aa14.93□□□□□ -0.02
PTPRF-213ENST00000481019 BOLA2Q9H3K6 86 aa14.93□□□□□ -0.02
PTPRF-213ENST00000481019 OTOFQ9HC10 1997 aa14.93□□□□□ -0.02
PTPRF-213ENST00000481019 USP2O75604 605 aaPredicted RBP14.92□□□□□ -0.02
PTPRF-213ENST00000481019 CHGBP05060 677 aa14.92□□□□□ -0.02
PTPRF-213ENST00000481019 TTLL12Q14166 644 aaPredicted RBP14.92□□□□□ -0.02
PTPRF-213ENST00000481019 SLFNL1Q499Z3 407 aa14.92□□□□□ -0.02
PTPRF-213ENST00000481019 LDLRAD1Q5T700 205 aa14.92□□□□□ -0.02
PTPRF-213ENST00000481019 FKBP1CQ5VVH2 108 aa14.92□□□□□ -0.02
PTPRF-213ENST00000481019 RGMBQ6NW40 437 aa14.92□□□□□ -0.02
PTPRF-213ENST00000481019 RASAL3Q86YV0 1011 aa14.92□□□□□ -0.02
PTPRF-213ENST00000481019 CLMNQ96JQ2 1002 aa14.92□□□□□ -0.02
PTPRF-213ENST00000481019 DNAJC2Q99543 621 aaKnown RBP14.92□□□□□ -0.02
PTPRF-213ENST00000481019 ANGEL1Q9UNK9 670 aaKnown RBP14.92□□□□□ -0.02
PTPRF-213ENST00000481019 GOLIM4O00461 696 aa14.91□□□□□ -0.02
PTPRF-213ENST00000481019 IDH1O75874 414 aaKnown RBP14.91□□□□□ -0.02
PTPRF-213ENST00000481019 ATP5JP18859 108 aa14.91□□□□□ -0.02
PTPRF-213ENST00000481019 RGS3P49796 1198 aa14.91□□□□□ -0.02
PTPRF-213ENST00000481019 ZNF157P51786 506 aaPredicted RBP14.91□□□□□ -0.02
PTPRF-213ENST00000481019 DYNLL1P63167 89 aaKnown RBP14.91□□□□□ -0.02
PTPRF-213ENST00000481019 FKBP1BP68106 108 aa14.91□□□□□ -0.02
PTPRF-213ENST00000481019 TNFAIP1Q13829 316 aa14.91□□□□□ -0.02
PTPRF-213ENST00000481019 NAA16Q6N069 864 aaPredicted RBP14.91□□□□□ -0.02
PTPRF-213ENST00000481019 FAM83AQ86UY5 434 aa14.91□□□□□ -0.02
PTPRF-213ENST00000481019 SH3RF3Q8TEJ3 882 aaPredicted RBP14.91□□□□□ -0.02
PTPRF-213ENST00000481019 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.91□□□□□ -0.02
PTPRF-213ENST00000481019 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.91□□□□□ -0.02
PTPRF-213ENST00000481019 SLC10A3P09131 477 aa14.9□□□□□ -0.02
PTPRF-213ENST00000481019 NF2P35240 595 aa14.9□□□□□ -0.02
PTPRF-213ENST00000481019 GSTO1P78417 241 aa14.9□□□□□ -0.02
PTPRF-213ENST00000481019 MAP3K11Q16584 847 aa14.9□□□□□ -0.02
PTPRF-213ENST00000481019 MAGEB6Q8N7X4 407 aa14.9□□□□□ -0.02
PTPRF-213ENST00000481019 FAM151AQ8WW52 585 aa14.9□□□□□ -0.02
PTPRF-213ENST00000481019 HAUS7Q99871 368 aa14.9□□□□□ -0.02
PTPRF-213ENST00000481019 IDI2Q9BXS1 227 aa14.9□□□□□ -0.02
PTPRF-213ENST00000481019 AATFQ9NY61 560 aaKnown RBP eCLIP14.9□□□□□ -0.02
PTPRF-213ENST00000481019 TMOD2Q9NZR1 351 aa14.9□□□□□ -0.02
PTPRF-213ENST00000481019 CDK5RAP2Q96SN8 1893 aa14.9□□□□□ -0.02
PTPRF-213ENST00000481019 ATRNL1Q5VV63 1379 aa14.89□□□□□ -0.03
PTPRF-213ENST00000481019 HSPA1AP0DMV8 641 aaKnown RBP14.89□□□□□ -0.03
PTPRF-213ENST00000481019 HSPA1BP0DMV9 641 aaKnown RBP14.89□□□□□ -0.03
PTPRF-213ENST00000481019 CYP7A1P22680 504 aa14.89□□□□□ -0.03
PTPRF-213ENST00000481019 TNNI2P48788 182 aa14.89□□□□□ -0.03
PTPRF-213ENST00000481019 PICALMQ13492 652 aa14.89□□□□□ -0.03
PTPRF-213ENST00000481019 SUPT20HL1Q3ZLR7 823 aa14.89□□□□□ -0.03
PTPRF-213ENST00000481019 ANKRD45Q5TZF3 282 aa14.89□□□□□ -0.03
PTPRF-213ENST00000481019 MIGA2Q7L4E1 593 aa14.89□□□□□ -0.03
PTPRF-213ENST00000481019 ARMC9Q7Z3E5 817 aa14.89□□□□□ -0.03
PTPRF-213ENST00000481019 SLF2Q8IX21 1173 aa14.89□□□□□ -0.03
PTPRF-213ENST00000481019 CCDC136Q96JN2 1154 aa14.89□□□□□ -0.03
PTPRF-213ENST00000481019 SALL3Q9BXA9 1300 aa14.89□□□□□ -0.03
PTPRF-213ENST00000481019 RPAP1Q9BWH6 1393 aaPredicted RBP14.88□□□□□ -0.03
PTPRF-213ENST00000481019 TCRBV5S4A2TA0A5A2 114 aa14.88□□□□□ -0.03
PTPRF-213ENST00000481019 DDTLA6NHG4 134 aaPredicted RBP14.88□□□□□ -0.03
PTPRF-213ENST00000481019 LDHCP07864 332 aa14.88□□□□□ -0.03
PTPRF-213ENST00000481019 GJA5P36382 358 aa14.88□□□□□ -0.03
PTPRF-213ENST00000481019 ECE1P42892 770 aa14.88□□□□□ -0.03
PTPRF-213ENST00000481019 MKRN3Q13064 507 aaKnown RBP14.88□□□□□ -0.03
PTPRF-213ENST00000481019 MIGA1Q8NAN2 632 aa14.88□□□□□ -0.03
PTPRF-213ENST00000481019 ECHDC1Q9NTX5 307 aa14.88□□□□□ -0.03
PTPRF-213ENST00000481019 PAG1Q9NWQ8 432 aa14.88□□□□□ -0.03
PTPRF-213ENST00000481019 PPP1R12BO60237 982 aaPredicted RBP14.87□□□□□ -0.03
PTPRF-213ENST00000481019 MAP4K4O95819 1239 aaPredicted RBP14.87□□□□□ -0.03
PTPRF-213ENST00000481019 PDE6AP16499 860 aa14.87□□□□□ -0.03
PTPRF-213ENST00000481019 PPP4CP60510 307 aa14.87□□□□□ -0.03
PTPRF-213ENST00000481019 KIF23Q02241 960 aaPredicted RBP14.87□□□□□ -0.03
PTPRF-213ENST00000481019 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms