RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 UBE4AQ14139 1066 aa11.16□□□□□ -0.62
VCP-206ENST00000480327 SUPT20HL1Q3ZLR7 823 aa11.16□□□□□ -0.62
VCP-206ENST00000480327 MFSD14BQ5SR56 506 aa11.16□□□□□ -0.62
VCP-206ENST00000480327 CD99L2Q8TCZ2 262 aa11.16□□□□□ -0.62
VCP-206ENST00000480327 ELP3Q9H9T3 547 aa11.16□□□□□ -0.62
VCP-206ENST00000480327 TTF2Q9UNY4 1162 aaKnown RBP11.16□□□□□ -0.62
VCP-206ENST00000480327 NOP58Q9Y2X3 529 aaKnown RBP11.16□□□□□ -0.62
VCP-206ENST00000480327 MYO1BO43795 1136 aa11.15□□□□□ -0.62
VCP-206ENST00000480327 HIBADHP31937 336 aaKnown RBP11.15□□□□□ -0.62
VCP-206ENST00000480327 RBM5P52756 815 aaKnown RBP eCLIP11.15□□□□□ -0.62
VCP-206ENST00000480327 PUM3Q15397 648 aaKnown RBP11.15□□□□□ -0.62
VCP-206ENST00000480327 ATP2B3Q16720 1220 aa11.15□□□□□ -0.62
VCP-206ENST00000480327 ANKRD13AQ8IZ07 590 aa11.15□□□□□ -0.62
VCP-206ENST00000480327 BRI3BPQ8WY22 251 aa11.15□□□□□ -0.62
VCP-206ENST00000480327 OPTNQ96CV9 577 aa11.15□□□□□ -0.62
VCP-206ENST00000480327 TMEM39BQ9GZU3 492 aa11.15□□□□□ -0.62
VCP-206ENST00000480327 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
VCP-206ENST00000480327 SERPINA10Q9UK55 444 aa11.15□□□□□ -0.62
VCP-206ENST00000480327 IQSEC3Q9UPP2 1182 aaPredicted RBP11.15□□□□□ -0.62
VCP-206ENST00000480327 PTPN22Q9Y2R2 807 aa11.15□□□□□ -0.62
VCP-206ENST00000480327 AK9Q5TCS8 1911 aa11.15□□□□□ -0.62
VCP-206ENST00000480327 TCP10L2B9ZVM9 353 aa11.14□□□□□ -0.63
VCP-206ENST00000480327 SLC5A1P13866 664 aa11.14□□□□□ -0.63
VCP-206ENST00000480327 FGFR2P21802 821 aa11.14□□□□□ -0.63
VCP-206ENST00000480327 ADORA1P30542 326 aa11.14□□□□□ -0.63
VCP-206ENST00000480327 CRKP46108 304 aa11.14□□□□□ -0.63
VCP-206ENST00000480327 IREB2P48200 963 aaKnown RBP11.14□□□□□ -0.63
VCP-206ENST00000480327 TIMM10P62072 90 aa11.14□□□□□ -0.63
VCP-206ENST00000480327 AAMPQ13685 434 aa11.14□□□□□ -0.63
VCP-206ENST00000480327 FBXO33Q7Z6M2 555 aa11.14□□□□□ -0.63
VCP-206ENST00000480327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.14□□□□□ -0.63
VCP-206ENST00000480327 NEUROD6Q96NK8 337 aa11.14□□□□□ -0.63
VCP-206ENST00000480327 IL1RAPL2Q9NP60 686 aa11.14□□□□□ -0.63
VCP-206ENST00000480327 MGAMO43451 1857 aa11.14□□□□□ -0.63
VCP-206ENST00000480327 A0A1B0GUL7 405 aa11.13□□□□□ -0.63
VCP-206ENST00000480327 SMARCA5O60264 1052 aaPredicted RBP11.13□□□□□ -0.63
VCP-206ENST00000480327 IGHDP01880 384 aa11.13□□□□□ -0.63
VCP-206ENST00000480327 IFIT1P09914 478 aaKnown RBP11.13□□□□□ -0.63
VCP-206ENST00000480327 BCAMP50895 628 aa11.13□□□□□ -0.63
VCP-206ENST00000480327 CACNB3P54284 484 aa11.13□□□□□ -0.63
VCP-206ENST00000480327 VGLL4Q14135 290 aa11.13□□□□□ -0.63
VCP-206ENST00000480327 HSP90AB4PQ58FF6 505 aa11.13□□□□□ -0.63
VCP-206ENST00000480327 RHPN1Q8TCX5 695 aa11.13□□□□□ -0.63
VCP-206ENST00000480327 LPIN2Q92539 896 aa11.13□□□□□ -0.63
VCP-206ENST00000480327 ARMC5Q96C12 935 aa11.13□□□□□ -0.63
VCP-206ENST00000480327 DCTPP1Q9H773 170 aa11.13□□□□□ -0.63
VCP-206ENST00000480327 PTPRFP10586 1907 aa11.13□□□□□ -0.63
VCP-206ENST00000480327 PHIPQ8WWQ0 1821 aa11.12□□□□□ -0.63
VCP-206ENST00000480327 DOCK2Q92608 1830 aa11.12□□□□□ -0.63
VCP-206ENST00000480327 RAB11FIP3O75154 756 aa11.12□□□□□ -0.63
VCP-206ENST00000480327 SP3Q02447 781 aa11.12□□□□□ -0.63
VCP-206ENST00000480327 HDAC1Q13547 482 aaPredicted RBP11.12□□□□□ -0.63
VCP-206ENST00000480327 TNNI3KQ59H18 835 aa11.12□□□□□ -0.63
VCP-206ENST00000480327 CAVIN4Q5BKX8 364 aa11.12□□□□□ -0.63
VCP-206ENST00000480327 VPS37DQ86XT2 251 aa11.12□□□□□ -0.63
VCP-206ENST00000480327 ERC1Q8IUD2 1116 aa11.12□□□□□ -0.63
VCP-206ENST00000480327 FAM43AQ8N2R8 423 aa11.12□□□□□ -0.63
VCP-206ENST00000480327 ERO1AQ96HE7 468 aa11.12□□□□□ -0.63
VCP-206ENST00000480327 CCDC8Q9H0W5 538 aaPredicted RBP11.12□□□□□ -0.63
VCP-206ENST00000480327 RWDD1Q9H446 243 aaPredicted RBP11.12□□□□□ -0.63
VCP-206ENST00000480327 AKAP2Q9Y2D5 859 aa11.12□□□□□ -0.63
VCP-206ENST00000480327 SNCAIPQ9Y6H5 919 aa11.12□□□□□ -0.63
VCP-206ENST00000480327 FPGT-TNNI3KV9GXZ4 949 aa11.12□□□□□ -0.63
VCP-206ENST00000480327 MYH2Q9UKX2 1941 aa11.11□□□□□ -0.63
VCP-206ENST00000480327 CEP290O15078 2479 aa11.11□□□□□ -0.63
VCP-206ENST00000480327 EN2P19622 333 aaPredicted RBP11.11□□□□□ -0.63
VCP-206ENST00000480327 CHAF1AQ13111 956 aaPredicted RBP11.11□□□□□ -0.63
VCP-206ENST00000480327 TNFAIP1Q13829 316 aa11.11□□□□□ -0.63
VCP-206ENST00000480327 GORABQ5T7V8 394 aa11.11□□□□□ -0.63
VCP-206ENST00000480327 APOBEC3HQ6NTF7 200 aaKnown RBP11.11□□□□□ -0.63
VCP-206ENST00000480327 AACSQ86V21 672 aa11.11□□□□□ -0.63
VCP-206ENST00000480327 EAF2Q96CJ1 260 aaPredicted RBP11.11□□□□□ -0.63
VCP-206ENST00000480327 KIF1BPQ96EK5 621 aa11.11□□□□□ -0.63
VCP-206ENST00000480327 XAGE2Q96GT9 111 aa11.11□□□□□ -0.63
VCP-206ENST00000480327 LRRCC1Q9C099 1032 aa11.11□□□□□ -0.63
VCP-206ENST00000480327 EFCC1Q9HA90 598 aa11.11□□□□□ -0.63
VCP-206ENST00000480327 TLR7Q9NYK1 1049 aaKnown RBP11.11□□□□□ -0.63
VCP-206ENST00000480327 SZT2Q5T011 3432 aa11.11□□□□□ -0.63
VCP-206ENST00000480327 CCL15-CCL14A0A0B4J2E2 113 aa11.1□□□□□ -0.63
VCP-206ENST00000480327 SPDYE5A6NIY4 337 aa11.1□□□□□ -0.63
VCP-206ENST00000480327 FRAT2O75474 233 aaPredicted RBP11.1□□□□□ -0.63
VCP-206ENST00000480327 PHKA1P46020 1223 aa11.1□□□□□ -0.63
VCP-206ENST00000480327 MAP3K9P80192 1104 aa11.1□□□□□ -0.63
VCP-206ENST00000480327 CCL15Q16663 113 aa11.1□□□□□ -0.63
VCP-206ENST00000480327 ANKRD45Q5TZF3 282 aa11.1□□□□□ -0.63
VCP-206ENST00000480327 B4GALNT3Q6L9W6 998 aa11.1□□□□□ -0.63
VCP-206ENST00000480327 ZKSCAN4Q969J2 545 aaPredicted RBP11.1□□□□□ -0.63
VCP-206ENST00000480327 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
VCP-206ENST00000480327 ZNF333Q96JL9 665 aa11.1□□□□□ -0.63
VCP-206ENST00000480327 DBNDD2Q9BQY9 259 aa11.1□□□□□ -0.63
VCP-206ENST00000480327 ARHGAP39Q9C0H5 1083 aa11.1□□□□□ -0.63
VCP-206ENST00000480327 GPR108Q9NPR9 543 aa11.1□□□□□ -0.63
VCP-206ENST00000480327 PTCH2Q9Y6C5 1203 aa11.1□□□□□ -0.63
VCP-206ENST00000480327 CTGFP29279 349 aa11.09□□□□□ -0.63
VCP-206ENST00000480327 HDLBPQ00341 1268 aaKnown RBP11.09□□□□□ -0.63
VCP-206ENST00000480327 TAF1CQ15572 869 aaPredicted RBP11.09□□□□□ -0.63
VCP-206ENST00000480327 CCDC102BQ68D86 513 aa11.09□□□□□ -0.63
VCP-206ENST00000480327 OTUD7BQ6GQQ9 843 aa11.09□□□□□ -0.63
VCP-206ENST00000480327 CLASRPQ8N2M8 674 aaKnown RBP11.09□□□□□ -0.63
VCP-206ENST00000480327 ZDHHC15Q96MV8 337 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms