RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	CDC37L1	Q7L3B6	337 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	DRC7	Q8IY82	874 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	ARID3A	Q99856	593 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	TRIM5	Q9C035	493 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	DACT1	Q9NYF0	836 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	OGFR	Q9NZT2	677 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	SPEF2	Q9C093	1822 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	CEP350	Q5VT06	3117 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	MED23	Q9ULK4	1368 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	UTY	O14607	1347 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	GRM8	O00222	908 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	LIG1	P18858	919 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	SARM1	Q6SZW1	724 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	CCDC186	Q7Z3E2	898 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	LEO1	Q8WVC0	666 aa	Predicted RBP	10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	GREM2	Q9H772	168 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	G3BP1	Q13283	466 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	TPRN	Q4KMQ1	711 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	ZSCAN25	Q6NSZ9	544 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	AACS	Q86V21	672 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	LUZP1	Q86V48	1076 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	VPS33B	Q9H267	617 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	NMRK2	Q9NPI5	230 aa		10.64	□□□□□ -0.71
SH3YL1-222	ENST00000479739	FZD9	O00144	591 aa		10.63	□□□□□ -0.71
SH3YL1-222	ENST00000479739	TNNT1	P13805	278 aa		10.63	□□□□□ -0.71
SH3YL1-222	ENST00000479739	ZNF165	P49910	485 aa		10.63	□□□□□ -0.71
SH3YL1-222	ENST00000479739	FOXO4	P98177	505 aa		10.63	□□□□□ -0.71
SH3YL1-222	ENST00000479739	NMI	Q13287	307 aa	Predicted RBP	10.63	□□□□□ -0.71
SH3YL1-222	ENST00000479739	ATP2B3	Q16720	1220 aa		10.63	□□□□□ -0.71
SH3YL1-222	ENST00000479739	ATL3	Q6DD88	541 aa		10.63	□□□□□ -0.71
SH3YL1-222	ENST00000479739	NECAB1	Q8N987	351 aa		10.63	□□□□□ -0.71
SH3YL1-222	ENST00000479739	TSC1	Q92574	1164 aa		10.63	□□□□□ -0.71
SH3YL1-222	ENST00000479739	MRFAP1L1	Q96HT8	127 aa		10.63	□□□□□ -0.71
SH3YL1-222	ENST00000479739	TMX4	Q9H1E5	349 aa	Predicted RBP	10.63	□□□□□ -0.71
SH3YL1-222	ENST00000479739	GOLGA6L19	H0YKK7	550 aa		10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	DHX8	Q14562	1220 aa	Known RBP	10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	TAF3	Q5VWG9	929 aa		10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	DPP8	Q6V1X1	898 aa	Predicted RBP	10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	CCDC112	Q8NEF3	446 aa		10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	BICD2	Q8TD16	824 aa		10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	CHMP4C	Q96CF2	233 aa		10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	PRDM10	Q9NQV6	1147 aa		10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	CLIP2	Q9UDT6	1046 aa		10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	KIF2A	O00139	706 aa	Predicted RBP	10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	GABPB1	Q06547	395 aa	Predicted RBP	10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	CAMK4	Q16566	473 aa		10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	EPHA10	Q5JZY3	1008 aa		10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	SUPT20H	Q8NEM7	779 aa		10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	KAZALD1	Q96I82	304 aa		10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	LLPH	Q9BRT6	129 aa	Known RBP	10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739		A0A1B0GUL6	1792 aa		10.62	□□□□□ -0.71
SH3YL1-222	ENST00000479739	ZNF541	Q9H0D2	1346 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	POTEC	B2RU33	542 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	GPSM2	P81274	684 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	NCBP1	Q09161	790 aa	Known RBP	10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	TOB2	Q14106	344 aa	Predicted RBP	10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	DPY19L2	Q6NUT2	758 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	FERMT3	Q86UX7	667 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	TICAM2	Q86XR7	235 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	ANKRD18A	Q8IVF6	992 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	CKAP2L	Q8IYA6	745 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	GTF3C6	Q969F1	213 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	CDC5L	Q99459	802 aa	Known RBP	10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	FSD1	Q9BTV5	496 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	SCN4A	P35499	1836 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	PPIP5K2	O43314	1243 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	ITGA6	P23229	1130 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	AOC3	Q16853	763 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	TPD52L1	Q16890	204 aa	Predicted RBP	10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	LARGE2	Q8N3Y3	721 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	FAM227B	Q96M60	508 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	KCND1	Q9NSA2	647 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	BSDC1	Q9NW68	430 aa	Predicted RBP	10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	POLL	Q9UGP5	575 aa		10.61	□□□□□ -0.71
SH3YL1-222	ENST00000479739	DDN	O94850	711 aa	Predicted RBP	10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	HMGB1	P09429	215 aa	Known RBP	10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	C1QTNF8	P60827	252 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	REST	Q13127	1097 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	STX1A	Q16623	288 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	JDP2	Q8WYK2	163 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	SUCLG2	Q96I99	432 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	C16orf45	Q96MC5	204 aa	Predicted RBP	10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	RRAGC	Q9HB90	399 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739		H3BQV1	296 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	NR1I2	O75469	434 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	SASH1	O94885	1247 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	TUBB4A	P04350	444 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	U2AF2	P26368	475 aa	Known RBP eCLIP	10.6	□□□□□ -0.71	7e-9	■■■□□ 17.8
SH3YL1-222	ENST00000479739	FAM193A	P78312	1265 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	IFFO2	Q5TF58	517 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	TBC1D16	Q8TBP0	767 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739	CTNNA3	Q9UI47	895 aa		10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739		U3KPZ7	1027 aa	Predicted RBP	10.6	□□□□□ -0.71
SH3YL1-222	ENST00000479739		A0A0D9SFI3	127 aa		10.59	□□□□□ -0.71
SH3YL1-222	ENST00000479739	RABL6	Q3YEC7	729 aa	Predicted RBP	10.59	□□□□□ -0.71
SH3YL1-222	ENST00000479739	CEP135	Q66GS9	1140 aa		10.59	□□□□□ -0.71
SH3YL1-222	ENST00000479739	NAA16	Q6N069	864 aa	Predicted RBP	10.59	□□□□□ -0.71
SH3YL1-222	ENST00000479739	LMBR1L	Q6UX01	489 aa		10.59	□□□□□ -0.71

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