RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 PDE3AQ14432 1141 aa6.76□□□□□ -1.33
CCNL1-220ENST00000478454 NUTM2GQ5VZR2 741 aa6.76□□□□□ -1.33
CCNL1-220ENST00000478454 MAP1SQ66K74 1059 aaPredicted RBP6.76□□□□□ -1.33
CCNL1-220ENST00000478454 KCNB2Q92953 911 aa6.76□□□□□ -1.33
CCNL1-220ENST00000478454 CBX8Q9HC52 389 aa6.76□□□□□ -1.33
CCNL1-220ENST00000478454 PPP1R9AQ9ULJ8 1098 aa6.76□□□□□ -1.33
CCNL1-220ENST00000478454 PCDHGC5Q9Y5F6 944 aa6.76□□□□□ -1.33
CCNL1-220ENST00000478454 IGHA1P01876 353 aa6.75□□□□□ -1.33
CCNL1-220ENST00000478454 AKAP4Q5JQC9 854 aa6.75□□□□□ -1.33
CCNL1-220ENST00000478454 ANKRD34AQ69YU3 496 aa6.75□□□□□ -1.33
CCNL1-220ENST00000478454 C12orf50Q8NA57 414 aaPredicted RBP6.75□□□□□ -1.33
CCNL1-220ENST00000478454 GPBAR1Q8TDU6 330 aa6.75□□□□□ -1.33
CCNL1-220ENST00000478454 TP53INP1Q96A56 240 aa6.75□□□□□ -1.33
CCNL1-220ENST00000478454 MRRFQ96E11 262 aaKnown RBP6.75□□□□□ -1.33
CCNL1-220ENST00000478454 NOC4LQ9BVI4 516 aaKnown RBP6.75□□□□□ -1.33
CCNL1-220ENST00000478454 TLR6Q9Y2C9 796 aa6.75□□□□□ -1.33
CCNL1-220ENST00000478454 ADH5P11766 374 aa6.74□□□□□ -1.33
CCNL1-220ENST00000478454 LIG3P49916 1009 aa6.74□□□□□ -1.33
CCNL1-220ENST00000478454 SOX4Q06945 474 aaPredicted RBP6.74□□□□□ -1.33
CCNL1-220ENST00000478454 RSPO4Q2I0M5 234 aaPredicted RBP6.74□□□□□ -1.33
CCNL1-220ENST00000478454 TSNAXIP1Q2TAA8 658 aa6.74□□□□□ -1.33
CCNL1-220ENST00000478454 KIF4BQ2VIQ3 1234 aa6.74□□□□□ -1.33
CCNL1-220ENST00000478454 NKAPLQ5M9Q1 402 aa6.74□□□□□ -1.33
CCNL1-220ENST00000478454 TTBK2Q6IQ55 1244 aa6.74□□□□□ -1.33
CCNL1-220ENST00000478454 FDX2Q6P4F2 183 aa6.74□□□□□ -1.33
CCNL1-220ENST00000478454 C2CD4AQ8NCU7 369 aaPredicted RBP6.74□□□□□ -1.33
CCNL1-220ENST00000478454 CYP4F12Q9HCS2 524 aa6.74□□□□□ -1.33
CCNL1-220ENST00000478454 COPRSQ9NQ92 184 aa6.74□□□□□ -1.33
CCNL1-220ENST00000478454 KRT82Q9NSB4 513 aa6.74□□□□□ -1.33
CCNL1-220ENST00000478454 PCDHB5Q9Y5E4 795 aa6.74□□□□□ -1.33
CCNL1-220ENST00000478454 FURINP09958 794 aa6.73□□□□□ -1.33
CCNL1-220ENST00000478454 TFE3P19532 575 aaPredicted RBP6.73□□□□□ -1.33
CCNL1-220ENST00000478454 LLGL2Q6P1M3 1020 aa6.73□□□□□ -1.33
CCNL1-220ENST00000478454 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.73□□□□□ -1.33
CCNL1-220ENST00000478454 AGMOQ6ZNB7 445 aa6.73□□□□□ -1.33
CCNL1-220ENST00000478454 TMEM87AQ8NBN3 555 aa6.73□□□□□ -1.33
CCNL1-220ENST00000478454 PHC3Q8NDX5 983 aa6.73□□□□□ -1.33
CCNL1-220ENST00000478454 GAL3ST3Q96A11 431 aa6.73□□□□□ -1.33
CCNL1-220ENST00000478454 EMILIN2Q9BXX0 1053 aa6.73□□□□□ -1.33
CCNL1-220ENST00000478454 CEP41Q9BYV8 373 aa6.73□□□□□ -1.33
CCNL1-220ENST00000478454 CYP8B1Q9UNU6 501 aa6.73□□□□□ -1.33
CCNL1-220ENST00000478454 TMPRSS2O15393 492 aa6.72□□□□□ -1.33
CCNL1-220ENST00000478454 VAMP1P23763 118 aa6.72□□□□□ -1.33
CCNL1-220ENST00000478454 CDK8P49336 464 aa6.72□□□□□ -1.33
CCNL1-220ENST00000478454 ERMP1Q7Z2K6 904 aa6.72□□□□□ -1.33
CCNL1-220ENST00000478454 MYRFLQ96LU7 910 aa6.72□□□□□ -1.33
CCNL1-220ENST00000478454 RAD18Q9NS91 495 aa6.72□□□□□ -1.33
CCNL1-220ENST00000478454 ACTL7BQ9Y614 415 aa6.72□□□□□ -1.33
CCNL1-220ENST00000478454 TRIM37O94972 964 aa6.71□□□□□ -1.34
CCNL1-220ENST00000478454 ITGB7P26010 798 aa6.71□□□□□ -1.34
CCNL1-220ENST00000478454 FANCCQ00597 558 aa6.71□□□□□ -1.34
CCNL1-220ENST00000478454 SEPT6Q14141 434 aa6.71□□□□□ -1.34
CCNL1-220ENST00000478454 SGO2Q562F6 1265 aa6.71□□□□□ -1.34
CCNL1-220ENST00000478454 ZC3H12AQ5D1E8 599 aaKnown RBP6.71□□□□□ -1.34
CCNL1-220ENST00000478454 CDPF1Q6NVV7 123 aa6.71□□□□□ -1.34
CCNL1-220ENST00000478454 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.71□□□□□ -1.34
CCNL1-220ENST00000478454 UTP4Q969X6 686 aaKnown RBP6.71□□□□□ -1.34
CCNL1-220ENST00000478454 GSX1Q9H4S2 264 aaPredicted RBP6.71□□□□□ -1.34
CCNL1-220ENST00000478454 DISC1Q9NRI5 854 aa6.71□□□□□ -1.34
CCNL1-220ENST00000478454 FAM105AQ9NUU6 356 aa6.71□□□□□ -1.34
CCNL1-220ENST00000478454 CRIM1Q9NZV1 1036 aa6.71□□□□□ -1.34
CCNL1-220ENST00000478454 SAMM50Q9Y512 469 aa6.71□□□□□ -1.34
CCNL1-220ENST00000478454 SYNGAP1Q96PV0 1343 aa6.71□□□□□ -1.34
CCNL1-220ENST00000478454 SART1O43290 800 aaKnown RBP6.7□□□□□ -1.34
CCNL1-220ENST00000478454 BMP3P12645 472 aa6.7□□□□□ -1.34
CCNL1-220ENST00000478454 RPS26P62854 115 aaKnown RBP6.7□□□□□ -1.34
CCNL1-220ENST00000478454 INPP5AQ14642 412 aa6.7□□□□□ -1.34
CCNL1-220ENST00000478454 LRRC14Q15048 493 aa6.7□□□□□ -1.34
CCNL1-220ENST00000478454 UVSSAQ2YD98 709 aa6.7□□□□□ -1.34
CCNL1-220ENST00000478454 PRR23CQ6ZRP0 262 aa6.7□□□□□ -1.34
CCNL1-220ENST00000478454 DYMQ7RTS9 669 aa6.7□□□□□ -1.34
CCNL1-220ENST00000478454 FAM20CQ8IXL6 584 aa6.7□□□□□ -1.34
CCNL1-220ENST00000478454 RHOVQ96L33 236 aa6.7□□□□□ -1.34
CCNL1-220ENST00000478454 RSRP1Q9BUV0 290 aa6.7□□□□□ -1.34
CCNL1-220ENST00000478454 KBTBD4Q9NVX7 518 aa6.7□□□□□ -1.34
CCNL1-220ENST00000478454 AP4E1Q9UPM8 1137 aa6.7□□□□□ -1.34
CCNL1-220ENST00000478454 DYRK3O43781 588 aa6.69□□□□□ -1.34
CCNL1-220ENST00000478454 ITGAEP38570 1179 aa6.69□□□□□ -1.34
CCNL1-220ENST00000478454 RBM25P49756 843 aaKnown RBP6.69□□□□□ -1.34
CCNL1-220ENST00000478454 ID3Q02535 119 aa6.69□□□□□ -1.34
CCNL1-220ENST00000478454 HP1BP3Q5SSJ5 553 aaPredicted RBP6.69□□□□□ -1.34
CCNL1-220ENST00000478454 FBLIM1Q8WUP2 373 aa6.69□□□□□ -1.34
CCNL1-220ENST00000478454 ACSBG1Q96GR2 724 aa6.69□□□□□ -1.34
CCNL1-220ENST00000478454 TMEM74Q96NL1 305 aa6.69□□□□□ -1.34
CCNL1-220ENST00000478454 FANCD2OSQ96PS1 177 aa6.69□□□□□ -1.34
CCNL1-220ENST00000478454 PCDHA4Q9UN74 947 aa6.69□□□□□ -1.34
CCNL1-220ENST00000478454 CSADQ9Y600 493 aa6.69□□□□□ -1.34
CCNL1-220ENST00000478454 HMX2A2RU54 273 aa6.68□□□□□ -1.34
CCNL1-220ENST00000478454 DCDC2CA8MYV0 355 aa6.68□□□□□ -1.34
CCNL1-220ENST00000478454 MINDY4BA8MYZ0 360 aa6.68□□□□□ -1.34
CCNL1-220ENST00000478454 PF4P02776 101 aa6.68□□□□□ -1.34
CCNL1-220ENST00000478454 SLFN14P0C7P3 912 aa6.68□□□□□ -1.34
CCNL1-220ENST00000478454 GARTP22102 1010 aa6.68□□□□□ -1.34
CCNL1-220ENST00000478454 GBP2P32456 591 aaPredicted RBP6.68□□□□□ -1.34
CCNL1-220ENST00000478454 ASPAP45381 313 aa6.68□□□□□ -1.34
CCNL1-220ENST00000478454 LRFN4Q6PJG9 635 aa6.68□□□□□ -1.34
CCNL1-220ENST00000478454 C12orf40Q86WS4 652 aa6.68□□□□□ -1.34
CCNL1-220ENST00000478454 TRIM42Q8IWZ5 723 aa6.68□□□□□ -1.34
CCNL1-220ENST00000478454 GGT7Q9UJ14 662 aa6.68□□□□□ -1.34
CCNL1-220ENST00000478454 DHX15O43143 795 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms