RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 CPS1P31327 1500 aa12.99□□□□□ -0.33
GFM1-207ENST00000478254 YEATS2Q9ULM3 1422 aa12.99□□□□□ -0.33
GFM1-207ENST00000478254 GOLGA6L9A6NEM1 432 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 EBAG9O00559 213 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 IFIT1P09914 478 aaKnown RBP12.98□□□□□ -0.33
GFM1-207ENST00000478254 MAP2K2P36507 400 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 TDO2P48775 406 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 ATP1A2P50993 1020 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 CT47A1Q5JQC4 288 aaPredicted RBP12.98□□□□□ -0.33
GFM1-207ENST00000478254 COPS6Q7L5N1 327 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 RASSF8Q8NHQ8 419 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 NOC3LQ8WTT2 800 aaKnown RBP12.98□□□□□ -0.33
GFM1-207ENST00000478254 JPH2Q9BR39 696 aaPredicted RBP12.98□□□□□ -0.33
GFM1-207ENST00000478254 GIGYF1O75420 1035 aaPredicted RBP12.98□□□□□ -0.33
GFM1-207ENST00000478254 A1BGP04217 495 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 TUBB4AP04350 444 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 FDPSP14324 419 aaKnown RBP12.98□□□□□ -0.33
GFM1-207ENST00000478254 TNNI3KQ59H18 835 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 BCAS4Q8TDM0 211 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 ZNF594Q96JF6 807 aaPredicted RBP12.98□□□□□ -0.33
GFM1-207ENST00000478254 SLC26A6Q9BXS9 759 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 SERTAD1Q9UHV2 236 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 CDC23Q9UJX2 597 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 FPGT-TNNI3KV9GXZ4 949 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 ZC3H13Q5T200 1668 aaKnown RBP12.98□□□□□ -0.33
GFM1-207ENST00000478254 A0A087WZG4 1122 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 LRRIQ3A6PVS8 624 aaPredicted RBP12.98□□□□□ -0.33
GFM1-207ENST00000478254 ATP8B1O43520 1251 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 ALDH1L1O75891 902 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 HMGB1P09429 215 aaKnown RBP12.98□□□□□ -0.33
GFM1-207ENST00000478254 CASP14P31944 242 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 FMR1Q06787 632 aaKnown RBP eCLIP12.98□□□□□ -0.33
GFM1-207ENST00000478254 BEND6Q5SZJ8 279 aaPredicted RBP12.98□□□□□ -0.33
GFM1-207ENST00000478254 CPLX2Q6PUV4 134 aaKnown RBP12.98□□□□□ -0.33
GFM1-207ENST00000478254 VPS37DQ86XT2 251 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 XAGE3Q8WTP9 111 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 JADE2Q9NQC1 790 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 TRIM10Q9UDY6 481 aa12.98□□□□□ -0.33
GFM1-207ENST00000478254 PTPRMP28827 1452 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 N4BP3O15049 544 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 KIAA0754O94854 1291 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 GUCY2CP25092 1073 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 RDXP35241 583 aaKnown RBP12.97□□□□□ -0.33
GFM1-207ENST00000478254 FILIP1LQ4L180 1135 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 KCTD16Q68DU8 428 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 CEP57Q86XR8 500 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 NUP133Q8WUM0 1156 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 LLPHQ9BRT6 129 aaKnown RBP12.97□□□□□ -0.33
GFM1-207ENST00000478254 ANKZF1Q9H8Y5 726 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 CAPN7Q9Y6W3 813 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 RAD9BQ6WBX8 426 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 TC2NQ8N9U0 490 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 KCNJ14Q9UNX9 436 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 HSPD1P10809 573 aaKnown RBP12.97□□□□□ -0.33
GFM1-207ENST00000478254 TSR1Q2NL82 804 aaKnown RBP12.97□□□□□ -0.33
GFM1-207ENST00000478254 LMBR1LQ6UX01 489 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 CCDC91Q7Z6B0 441 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 GIMAP7Q8NHV1 300 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 SMARCC2Q8TAQ2 1214 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 NCAPGQ9BPX3 1015 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 GBP3Q9H0R5 595 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 PAG1Q9NWQ8 432 aa12.97□□□□□ -0.33
GFM1-207ENST00000478254 SHTN1A0MZ66 631 aa12.96□□□□□ -0.33
GFM1-207ENST00000478254 STX10O60499 249 aa12.96□□□□□ -0.33
GFM1-207ENST00000478254 NAP1L1P55209 391 aaKnown RBP12.96□□□□□ -0.33
GFM1-207ENST00000478254 IMMTQ16891 758 aaKnown RBP12.96□□□□□ -0.33
GFM1-207ENST00000478254 IL17RAQ96F46 866 aa12.96□□□□□ -0.33
GFM1-207ENST00000478254 NAPGQ99747 312 aaPredicted RBP12.96□□□□□ -0.33
GFM1-207ENST00000478254 METP08581 1390 aa12.96□□□□□ -0.33
GFM1-207ENST00000478254 AATKQ6ZMQ8 1374 aa12.96□□□□□ -0.33
GFM1-207ENST00000478254 hCG_1642624A0A1W2PR95 340 aa12.96□□□□□ -0.33
GFM1-207ENST00000478254 CMA1P23946 247 aa12.96□□□□□ -0.33
GFM1-207ENST00000478254 TTC39AQ5SRH9 613 aa12.96□□□□□ -0.33
GFM1-207ENST00000478254 KIAA1328Q86T90 577 aa12.96□□□□□ -0.33
GFM1-207ENST00000478254 TADA2BQ86TJ2 420 aa12.96□□□□□ -0.33
GFM1-207ENST00000478254 SIRT1Q96EB6 747 aa12.96□□□□□ -0.33
GFM1-207ENST00000478254 DENND2AQ9ULE3 1009 aa12.96□□□□□ -0.33
GFM1-207ENST00000478254 TULP1O00294 542 aaPredicted RBP12.96□□□□□ -0.34
GFM1-207ENST00000478254 INPP5BP32019 993 aa12.96□□□□□ -0.34
GFM1-207ENST00000478254 METAP2P50579 478 aaKnown RBP eCLIP12.96□□□□□ -0.34
GFM1-207ENST00000478254 STIM1Q13586 685 aa12.96□□□□□ -0.34
GFM1-207ENST00000478254 PLEKHO1Q53GL0 409 aaPredicted RBP12.96□□□□□ -0.34
GFM1-207ENST00000478254 KRT40Q6A162 431 aa12.96□□□□□ -0.34
GFM1-207ENST00000478254 SHC4Q6S5L8 630 aa12.96□□□□□ -0.34
GFM1-207ENST00000478254 RSRC2Q7L4I2 434 aaKnown RBP12.96□□□□□ -0.34
GFM1-207ENST00000478254 LINS1Q8NG48 757 aa12.96□□□□□ -0.34
GFM1-207ENST00000478254 GOLGA6CA6NDK9 693 aa12.95□□□□□ -0.34
GFM1-207ENST00000478254 GOLGA6DP0CG33 693 aa12.95□□□□□ -0.34
GFM1-207ENST00000478254 MAP9Q49MG5 647 aa12.95□□□□□ -0.34
GFM1-207ENST00000478254 ZKSCAN3Q9BRR0 538 aa12.95□□□□□ -0.34
GFM1-207ENST00000478254 INCENPQ9NQS7 918 aa12.95□□□□□ -0.34
GFM1-207ENST00000478254 INTS13Q9NVM9 706 aa12.95□□□□□ -0.34
GFM1-207ENST00000478254 GOLGA6AQ9NYA3 693 aa12.95□□□□□ -0.34
GFM1-207ENST00000478254 A0A1W2PQ27 194 aa12.95□□□□□ -0.34
GFM1-207ENST00000478254 A0A1W2PQ64 194 aa12.95□□□□□ -0.34
GFM1-207ENST00000478254 A0A1W2PQD8 194 aa12.95□□□□□ -0.34
GFM1-207ENST00000478254 MACROD2A1Z1Q3 448 aa12.95□□□□□ -0.34
GFM1-207ENST00000478254 ZPR1O75312 459 aa12.95□□□□□ -0.34
GFM1-207ENST00000478254 ERCC3P19447 782 aa12.95□□□□□ -0.34
GFM1-207ENST00000478254 GRIN1Q05586 938 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms