RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 ADORA1P30542 326 aa14.03□□□□□ -0.16
ACTB-209ENST00000473257 SLC9C1Q4G0N8 1177 aa14.03□□□□□ -0.16
ACTB-209ENST00000473257 INTS3Q68E01 1043 aaKnown RBP14.03□□□□□ -0.16
ACTB-209ENST00000473257 ERO1BQ86YB8 467 aa14.03□□□□□ -0.16
ACTB-209ENST00000473257 SMC4Q9NTJ3 1288 aa14.03□□□□□ -0.16
ACTB-209ENST00000473257 E9PSI1 815 aa14.02□□□□□ -0.17
ACTB-209ENST00000473257 PHKA1P46020 1223 aa14.02□□□□□ -0.17
ACTB-209ENST00000473257 PPIL2Q13356 520 aa14.02□□□□□ -0.17
ACTB-209ENST00000473257 SNAPC2Q13487 334 aa14.02□□□□□ -0.17
ACTB-209ENST00000473257 ATP2B3Q16720 1220 aa14.02□□□□□ -0.17
ACTB-209ENST00000473257 HHIPL2Q6UWX4 724 aa14.02□□□□□ -0.17
ACTB-209ENST00000473257 FAM83AQ86UY5 434 aa14.02□□□□□ -0.17
ACTB-209ENST00000473257 LPIN2Q92539 896 aa14.02□□□□□ -0.17
ACTB-209ENST00000473257 ZNF341Q9BYN7 854 aa14.02□□□□□ -0.17
ACTB-209ENST00000473257 FAM198AQ9UFP1 575 aa14.02□□□□□ -0.17
ACTB-209ENST00000473257 TRIOBPQ9H2D6 2365 aa14.02□□□□□ -0.17
ACTB-209ENST00000473257 RANBP2P49792 3224 aaKnown RBP14.02□□□□□ -0.17
ACTB-209ENST00000473257 TLR2O60603 784 aa14.01□□□□□ -0.17
ACTB-209ENST00000473257 ZEB1P37275 1124 aaPredicted RBP14.01□□□□□ -0.17
ACTB-209ENST00000473257 LACTBP83111 547 aaPredicted RBP14.01□□□□□ -0.17
ACTB-209ENST00000473257 MOGSQ13724 837 aa14.01□□□□□ -0.17
ACTB-209ENST00000473257 SLC4A8Q2Y0W8 1093 aa14.01□□□□□ -0.17
ACTB-209ENST00000473257 HABP4Q5JVS0 413 aaKnown RBP14.01□□□□□ -0.17
ACTB-209ENST00000473257 USP40Q9NVE5 1235 aa14.01□□□□□ -0.17
ACTB-209ENST00000473257 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.01□□□□□ -0.17
ACTB-209ENST00000473257 NOB1Q9ULX3 412 aaKnown RBP14.01□□□□□ -0.17
ACTB-209ENST00000473257 LRRFIP2Q9Y608 721 aaKnown RBP14.01□□□□□ -0.17
ACTB-209ENST00000473257 AK9Q5TCS8 1911 aa14.01□□□□□ -0.17
ACTB-209ENST00000473257 MYH13Q9UKX3 1938 aa14.01□□□□□ -0.17
ACTB-209ENST00000473257 MAST3O60307 1309 aa14□□□□□ -0.17
ACTB-209ENST00000473257 PDHXO00330 501 aa14□□□□□ -0.17
ACTB-209ENST00000473257 UBTFL1P0CB47 393 aaPredicted RBP14□□□□□ -0.17
ACTB-209ENST00000473257 FKBP1CQ5VVH2 108 aa14□□□□□ -0.17
ACTB-209ENST00000473257 WDR66Q8TBY9 1149 aa14□□□□□ -0.17
ACTB-209ENST00000473257 FAM151AQ8WW52 585 aa14□□□□□ -0.17
ACTB-209ENST00000473257 TRIM47Q96LD4 638 aa14□□□□□ -0.17
ACTB-209ENST00000473257 TMEM106CQ9BVX2 250 aa14□□□□□ -0.17
ACTB-209ENST00000473257 MRIQ9BWK5 157 aa14□□□□□ -0.17
ACTB-209ENST00000473257 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14□□□□□ -0.17
ACTB-209ENST00000473257 RBBP6Q7Z6E9 1792 aaKnown RBP14□□□□□ -0.17
ACTB-209ENST00000473257 KIF16BQ96L93 1317 aa13.99□□□□□ -0.17
ACTB-209ENST00000473257 LDHBP07195 334 aaKnown RBP13.99□□□□□ -0.17
ACTB-209ENST00000473257 MTFR1Q15390 333 aa13.99□□□□□ -0.17
ACTB-209ENST00000473257 DCAF15Q66K64 600 aa13.99□□□□□ -0.17
ACTB-209ENST00000473257 C17orf99Q6UX52 265 aa13.99□□□□□ -0.17
ACTB-209ENST00000473257 SH3BP5LQ7L8J4 393 aa13.99□□□□□ -0.17
ACTB-209ENST00000473257 CCDC84Q86UT8 332 aaPredicted RBP13.99□□□□□ -0.17
ACTB-209ENST00000473257 MEIS3Q99687 375 aa13.99□□□□□ -0.17
ACTB-209ENST00000473257 CEP126Q9P2H0 1117 aa13.99□□□□□ -0.17
ACTB-209ENST00000473257 SUGT1Q9Y2Z0 365 aa13.99□□□□□ -0.17
ACTB-209ENST00000473257 SZT2Q5T011 3432 aa13.98□□□□□ -0.17
ACTB-209ENST00000473257 CYP2C8P10632 490 aa13.98□□□□□ -0.17
ACTB-209ENST00000473257 PSMC4P43686 418 aa13.98□□□□□ -0.17
ACTB-209ENST00000473257 RGS3P49796 1198 aa13.98□□□□□ -0.17
ACTB-209ENST00000473257 TIMM10P62072 90 aa13.98□□□□□ -0.17
ACTB-209ENST00000473257 PPATQ06203 517 aa13.98□□□□□ -0.17
ACTB-209ENST00000473257 PCDH10Q9P2E7 1040 aa13.98□□□□□ -0.17
ACTB-209ENST00000473257 ZNF112Q9UJU3 913 aa13.98□□□□□ -0.17
ACTB-209ENST00000473257 RPAP1Q9BWH6 1393 aaPredicted RBP13.97□□□□□ -0.17
ACTB-209ENST00000473257 ADGRA2Q96PE1 1338 aa13.97□□□□□ -0.17
ACTB-209ENST00000473257 OSBPP22059 807 aa13.97□□□□□ -0.17
ACTB-209ENST00000473257 KIF22Q14807 665 aa13.97□□□□□ -0.17
ACTB-209ENST00000473257 GPAT2Q6NUI2 795 aa13.97□□□□□ -0.17
ACTB-209ENST00000473257 NBPF11Q86T75 865 aa13.97□□□□□ -0.17
ACTB-209ENST00000473257 DDX4Q9NQI0 724 aaKnown RBP13.97□□□□□ -0.17
ACTB-209ENST00000473257 TNNQ9UQP3 1299 aa13.97□□□□□ -0.17
ACTB-209ENST00000473257 FAM196BA6NMK8 535 aa13.96□□□□□ -0.17
ACTB-209ENST00000473257 CIAO1O76071 339 aa13.96□□□□□ -0.17
ACTB-209ENST00000473257 FMNL1O95466 1100 aaPredicted RBP13.96□□□□□ -0.17
ACTB-209ENST00000473257 RASGRF1Q13972 1273 aa13.96□□□□□ -0.17
ACTB-209ENST00000473257 ALDH1L2Q3SY69 923 aa13.96□□□□□ -0.17
ACTB-209ENST00000473257 CCDC102BQ68D86 513 aa13.96□□□□□ -0.17
ACTB-209ENST00000473257 ANKRD23Q86SG2 305 aa13.96□□□□□ -0.17
ACTB-209ENST00000473257 SHISA4Q96DD7 197 aa13.96□□□□□ -0.17
ACTB-209ENST00000473257 HOOK2Q96ED9 719 aa13.96□□□□□ -0.17
ACTB-209ENST00000473257 KCNH4Q9UQ05 1017 aa13.96□□□□□ -0.17
ACTB-209ENST00000473257 COLQQ9Y215 455 aaPredicted RBP13.96□□□□□ -0.17
ACTB-209ENST00000473257 ATRNL1Q5VV63 1379 aa13.96□□□□□ -0.18
ACTB-209ENST00000473257 DDTLA6NHG4 134 aaPredicted RBP13.95□□□□□ -0.18
ACTB-209ENST00000473257 PHF20L1A8MW92 1017 aa13.95□□□□□ -0.18
ACTB-209ENST00000473257 H0YGN5 161 aa13.95□□□□□ -0.18
ACTB-209ENST00000473257 WDHD1O75717 1129 aaPredicted RBP13.95□□□□□ -0.18
ACTB-209ENST00000473257 TFCP2Q12800 502 aa13.95□□□□□ -0.18
ACTB-209ENST00000473257 PICALMQ13492 652 aa13.95□□□□□ -0.18
ACTB-209ENST00000473257 ARHGEF6Q15052 776 aa13.95□□□□□ -0.18
ACTB-209ENST00000473257 PI16Q6UXB8 463 aa13.95□□□□□ -0.18
ACTB-209ENST00000473257 ZSCAN29Q8IWY8 852 aaPredicted RBP13.95□□□□□ -0.18
ACTB-209ENST00000473257 TRMT2AQ8IZ69 625 aaKnown RBP13.95□□□□□ -0.18
ACTB-209ENST00000473257 GNL3LQ9NVN8 582 aaKnown RBP13.95□□□□□ -0.18
ACTB-209ENST00000473257 ABCF2Q9UG63 623 aa13.95□□□□□ -0.18
ACTB-209ENST00000473257 ZHX2Q9Y6X8 837 aa13.95□□□□□ -0.18
ACTB-209ENST00000473257 MYH2Q9UKX2 1941 aa13.94□□□□□ -0.18
ACTB-209ENST00000473257 IL15P40933 162 aaPredicted RBP13.94□□□□□ -0.18
ACTB-209ENST00000473257 PRKCZQ05513 592 aa13.94□□□□□ -0.18
ACTB-209ENST00000473257 NOL9Q5SY16 702 aaKnown RBP13.94□□□□□ -0.18
ACTB-209ENST00000473257 GADL1Q6ZQY3 521 aa13.94□□□□□ -0.18
ACTB-209ENST00000473257 ZNF384Q8TF68 577 aa13.94□□□□□ -0.18
ACTB-209ENST00000473257 GCC1Q96CN9 775 aa13.94□□□□□ -0.18
ACTB-209ENST00000473257 ZCCHC17Q9NP64 241 aaKnown RBP13.94□□□□□ -0.18
ACTB-209ENST00000473257 SRRDQ9UH36 339 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms