RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 GLIS2Q9BZE0 524 aaPredicted RBP14.93□□□□□ -0.02
PRKCB-205ENST00000472066 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.93□□□□□ -0.023e-7■■□□□ 13.1
PRKCB-205ENST00000472066 SCAF8Q9UPN6 1271 aaKnown RBP14.93□□□□□ -0.02
PRKCB-205ENST00000472066 TCRBV5S4A2TA0A5A2 114 aa14.92□□□□□ -0.02
PRKCB-205ENST00000472066 ADD2P35612 726 aa14.92□□□□□ -0.02
PRKCB-205ENST00000472066 PPP4CP60510 307 aa14.92□□□□□ -0.02
PRKCB-205ENST00000472066 ZSCAN25Q6NSZ9 544 aa14.92□□□□□ -0.02
PRKCB-205ENST00000472066 APOBEC3FQ8IUX4 373 aaKnown RBP14.92□□□□□ -0.02
PRKCB-205ENST00000472066 EVI5LQ96CN4 794 aa14.92□□□□□ -0.02
PRKCB-205ENST00000472066 VEZTQ9HBM0 779 aa14.92□□□□□ -0.02
PRKCB-205ENST00000472066 MYH13Q9UKX3 1938 aa14.92□□□□□ -0.02
PRKCB-205ENST00000472066 ZNF532Q9HCE3 1301 aa14.92□□□□□ -0.02
PRKCB-205ENST00000472066 TCP10L2B9ZVM9 353 aa14.91□□□□□ -0.02
PRKCB-205ENST00000472066 ADM5C9JUS6 153 aa14.91□□□□□ -0.02
PRKCB-205ENST00000472066 TRAF5O00463 557 aa14.91□□□□□ -0.02
PRKCB-205ENST00000472066 BAG3O95817 575 aa14.91□□□□□ -0.02
PRKCB-205ENST00000472066 CHGBP05060 677 aa14.91□□□□□ -0.02
PRKCB-205ENST00000472066 CACNB3P54284 484 aa14.91□□□□□ -0.02
PRKCB-205ENST00000472066 RHBDL3P58872 404 aa14.91□□□□□ -0.02
PRKCB-205ENST00000472066 SLFNL1Q499Z3 407 aa14.91□□□□□ -0.02
PRKCB-205ENST00000472066 DLK2Q6UY11 383 aa14.91□□□□□ -0.02
PRKCB-205ENST00000472066 SKAP1Q86WV1 359 aa14.91□□□□□ -0.02
PRKCB-205ENST00000472066 NOL10Q9BSC4 688 aaKnown RBP14.91□□□□□ -0.02
PRKCB-205ENST00000472066 AATFQ9NY61 560 aaKnown RBP eCLIP14.91□□□□□ -0.02
PRKCB-205ENST00000472066 TMOD2Q9NZR1 351 aa14.91□□□□□ -0.02
PRKCB-205ENST00000472066 TRIM6-TRIM34B2RNG4 842 aa14.9□□□□□ -0.02
PRKCB-205ENST00000472066 DYNLL1P63167 89 aaKnown RBP14.9□□□□□ -0.02
PRKCB-205ENST00000472066 FMR1Q06787 632 aaKnown RBP eCLIP14.9□□□□□ -0.029e-11■□□□□ 10.2
PRKCB-205ENST00000472066 RASA3Q14644 834 aa14.9□□□□□ -0.02
PRKCB-205ENST00000472066 UBE3CQ15386 1083 aa14.9□□□□□ -0.02
PRKCB-205ENST00000472066 FKBP1CQ5VVH2 108 aa14.9□□□□□ -0.02
PRKCB-205ENST00000472066 MIGA1Q8NAN2 632 aa14.9□□□□□ -0.02
PRKCB-205ENST00000472066 FSD1Q9BTV5 496 aa14.9□□□□□ -0.02
PRKCB-205ENST00000472066 DEFB129Q9H1M3 183 aa14.9□□□□□ -0.02
PRKCB-205ENST00000472066 PASKQ96RG2 1323 aa14.9□□□□□ -0.02
PRKCB-205ENST00000472066 RNF113AO15541 343 aaKnown RBP14.89□□□□□ -0.03
PRKCB-205ENST00000472066 ZFYP08048 801 aaPredicted RBP14.89□□□□□ -0.03
PRKCB-205ENST00000472066 TNNI2P48788 182 aa14.89□□□□□ -0.03
PRKCB-205ENST00000472066 C1QTNF8P60827 252 aa14.89□□□□□ -0.03
PRKCB-205ENST00000472066 TNFAIP1Q13829 316 aa14.89□□□□□ -0.03
PRKCB-205ENST00000472066 LRRFIP1Q32MZ4 808 aaKnown RBP14.89□□□□□ -0.03
PRKCB-205ENST00000472066 TTC22Q5TAA0 569 aa14.89□□□□□ -0.03
PRKCB-205ENST00000472066 SH3RF3Q8TEJ3 882 aaPredicted RBP14.89□□□□□ -0.03
PRKCB-205ENST00000472066 RILPL2Q969X0 211 aa14.89□□□□□ -0.03
PRKCB-205ENST00000472066 IDI2Q9BXS1 227 aa14.89□□□□□ -0.03
PRKCB-205ENST00000472066 MAGEB6P1A0A0J9YX57 407 aa14.88□□□□□ -0.03
PRKCB-205ENST00000472066 WDHD1O75717 1129 aaPredicted RBP14.88□□□□□ -0.03
PRKCB-205ENST00000472066 GSPT1P15170 499 aaKnown RBP14.88□□□□□ -0.03
PRKCB-205ENST00000472066 PLCG2P16885 1265 aa14.88□□□□□ -0.03
PRKCB-205ENST00000472066 NFIAQ12857 509 aa14.88□□□□□ -0.03
PRKCB-205ENST00000472066 PRAMEF18Q5VWM3 479 aa14.88□□□□□ -0.03
PRKCB-205ENST00000472066 FAM83AQ86UY5 434 aa14.88□□□□□ -0.03
PRKCB-205ENST00000472066 CDCA5Q96FF9 252 aa14.88□□□□□ -0.03
PRKCB-205ENST00000472066 RIOK1Q9BRS2 568 aaKnown RBP14.88□□□□□ -0.03
PRKCB-205ENST00000472066 FAM198AQ9UFP1 575 aa14.88□□□□□ -0.03
PRKCB-205ENST00000472066 PPP2R3BQ9Y5P8 575 aa14.88□□□□□ -0.03
PRKCB-205ENST00000472066 CNTNAP1P78357 1384 aa14.87□□□□□ -0.03
PRKCB-205ENST00000472066 ENTPD3O75355 529 aa14.87□□□□□ -0.03
PRKCB-205ENST00000472066 TCP10Q12799 353 aa14.87□□□□□ -0.03
PRKCB-205ENST00000472066 TICAM2Q86XR7 235 aa14.87□□□□□ -0.03
PRKCB-205ENST00000472066 CERS3Q8IU89 383 aa14.87□□□□□ -0.03
PRKCB-205ENST00000472066 TEX11Q8IYF3 940 aa14.87□□□□□ -0.03
PRKCB-205ENST00000472066 FAM151AQ8WW52 585 aa14.87□□□□□ -0.03
PRKCB-205ENST00000472066 TMEM39BQ9GZU3 492 aa14.87□□□□□ -0.03
PRKCB-205ENST00000472066 PUS7LQ9H0K6 701 aaKnown RBP14.87□□□□□ -0.03
PRKCB-205ENST00000472066 NPM3O75607 178 aaKnown RBP14.86□□□□□ -0.03
PRKCB-205ENST00000472066 SDSP20132 328 aa14.86□□□□□ -0.03
PRKCB-205ENST00000472066 RGS3P49796 1198 aa14.86□□□□□ -0.03
PRKCB-205ENST00000472066 CST9Q5W186 159 aa14.86□□□□□ -0.03
PRKCB-205ENST00000472066 ZFPM1Q8IX07 1006 aa14.86□□□□□ -0.03
PRKCB-205ENST00000472066 APPBP2Q92624 585 aa14.86□□□□□ -0.03
PRKCB-205ENST00000472066 OSBP2Q969R2 916 aa14.86□□□□□ -0.03
PRKCB-205ENST00000472066 TEPSINQ96N21 525 aa14.86□□□□□ -0.03
PRKCB-205ENST00000472066 DDX4Q9NQI0 724 aaKnown RBP14.86□□□□□ -0.03
PRKCB-205ENST00000472066 MBD4O95243 580 aa14.85□□□□□ -0.03
PRKCB-205ENST00000472066 CELF2O95319 508 aaKnown RBP14.85□□□□□ -0.03
PRKCB-205ENST00000472066 PICALMQ13492 652 aa14.85□□□□□ -0.03
PRKCB-205ENST00000472066 ZMYM1Q5SVZ6 1142 aa14.85□□□□□ -0.03
PRKCB-205ENST00000472066 NBPF12Q5TAG4 269 aaPredicted RBP14.85□□□□□ -0.03
PRKCB-205ENST00000472066 LCORLQ8N3X6 602 aa14.85□□□□□ -0.03
PRKCB-205ENST00000472066 TGFBRAP1Q8WUH2 860 aa14.85□□□□□ -0.03
PRKCB-205ENST00000472066 ARMT1Q9H993 441 aa14.85□□□□□ -0.03
PRKCB-205ENST00000472066 ZNF408Q9H9D4 720 aa14.85□□□□□ -0.03
PRKCB-205ENST00000472066 DOCK2Q92608 1830 aa14.85□□□□□ -0.03
PRKCB-205ENST00000472066 RFX7Q2KHR2 1363 aa14.85□□□□□ -0.03
PRKCB-205ENST00000472066 MAST2Q6P0Q8 1798 aa14.84□□□□□ -0.03
PRKCB-205ENST00000472066 APLP1P51693 650 aa14.84□□□□□ -0.03
PRKCB-205ENST00000472066 SUPT20HL1Q3ZLR7 823 aa14.84□□□□□ -0.03
PRKCB-205ENST00000472066 CDAN1Q8IWY9 1227 aa14.84□□□□□ -0.03
PRKCB-205ENST00000472066 AIDAQ96BJ3 306 aa14.84□□□□□ -0.03
PRKCB-205ENST00000472066 SEC62Q99442 399 aaKnown RBP14.84□□□□□ -0.03
PRKCB-205ENST00000472066 CRNKL1Q9BZJ0 848 aaKnown RBP14.84□□□□□ -0.03
PRKCB-205ENST00000472066 TMEM88BA6NKF7 163 aa14.83□□□□□ -0.04
PRKCB-205ENST00000472066 M0R2C6 588 aa14.83□□□□□ -0.04
PRKCB-205ENST00000472066 USP5P45974 858 aa14.83□□□□□ -0.04
PRKCB-205ENST00000472066 SH3BP5LQ7L8J4 393 aa14.83□□□□□ -0.04
PRKCB-205ENST00000472066 MAPKAPK5Q8IW41 473 aa14.83□□□□□ -0.04
PRKCB-205ENST00000472066 STRBPQ96SI9 672 aaKnown RBP14.83□□□□□ -0.04
PRKCB-205ENST00000472066 OSBPL5Q9H0X9 879 aaPredicted RBP14.83□□□□□ -0.04
PRKCB-205ENST00000472066 HELLSQ9NRZ9 838 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms