RNA–Protein interactions for RNA: ENST00000472033.1

ABCA4-205, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-205ENST00000472033 TRAPPC3LQ5T215 181 aa9.21□□□□□ -0.94
ABCA4-205ENST00000472033 PLD4Q96BZ4 506 aa9.21□□□□□ -0.94
ABCA4-205ENST00000472033 ANKRD30BQ9BXX2 1392 aa9.21□□□□□ -0.94
ABCA4-205ENST00000472033 PTPRUQ92729 1446 aa9.21□□□□□ -0.94
ABCA4-205ENST00000472033 FAM229AH3BQW9 127 aa9.2□□□□□ -0.94
ABCA4-205ENST00000472033 SPATA31C1P0DKV0 1188 aa9.2□□□□□ -0.94
ABCA4-205ENST00000472033 COL13A1Q5TAT6 717 aaPredicted RBP9.2□□□□□ -0.94
ABCA4-205ENST00000472033 CCER1Q8TC90 406 aaPredicted RBP9.2□□□□□ -0.94
ABCA4-205ENST00000472033 TTC9Q92623 222 aa9.2□□□□□ -0.94
ABCA4-205ENST00000472033 CCDC87Q9NVE4 849 aa9.2□□□□□ -0.94
ABCA4-205ENST00000472033 NRXN3Q9Y4C0 1643 aa9.2□□□□□ -0.94
ABCA4-205ENST00000472033 CYP2E1P05181 493 aaPredicted RBP9.19□□□□□ -0.94
ABCA4-205ENST00000472033 USP5P45974 858 aa9.19□□□□□ -0.94
ABCA4-205ENST00000472033 TRIM28Q13263 835 aaKnown RBP9.19□□□□□ -0.94
ABCA4-205ENST00000472033 GRIK5Q16478 980 aa9.19□□□□□ -0.94
ABCA4-205ENST00000472033 XKR5Q6UX68 686 aa9.19□□□□□ -0.94
ABCA4-205ENST00000472033 PPLO60437 1756 aa9.18□□□□□ -0.94
ABCA4-205ENST00000472033 BRD1O95696 1058 aa9.18□□□□□ -0.94
ABCA4-205ENST00000472033 ITGB2P05107 769 aa9.18□□□□□ -0.94
ABCA4-205ENST00000472033 SPATA31E1Q6ZUB1 1445 aa9.18□□□□□ -0.94
ABCA4-205ENST00000472033 DMRTC2Q8IXT2 367 aaPredicted RBP9.18□□□□□ -0.94
ABCA4-205ENST00000472033 ADGRF5Q8IZF2 1346 aa9.18□□□□□ -0.94
ABCA4-205ENST00000472033 SPACA7Q96KW9 195 aa9.18□□□□□ -0.94
ABCA4-205ENST00000472033 CNTN3Q9P232 1028 aa9.18□□□□□ -0.94
ABCA4-205ENST00000472033 KANSL3Q9P2N6 904 aa9.18□□□□□ -0.94
ABCA4-205ENST00000472033 ROBO1Q9Y6N7 1651 aa9.18□□□□□ -0.94
ABCA4-205ENST00000472033 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.17□□□□□ -0.94
ABCA4-205ENST00000472033 A0A0A0MRY4 1105 aa9.17□□□□□ -0.94
ABCA4-205ENST00000472033 RAC1P63000 192 aa9.17□□□□□ -0.94
ABCA4-205ENST00000472033 EHHADHQ08426 723 aa9.17□□□□□ -0.94
ABCA4-205ENST00000472033 MSL1Q68DK7 614 aa9.17□□□□□ -0.94
ABCA4-205ENST00000472033 WFDC8Q8IUA0 241 aa9.17□□□□□ -0.94
ABCA4-205ENST00000472033 XRN1Q8IZH2 1706 aaKnown RBP9.17□□□□□ -0.94
ABCA4-205ENST00000472033 DCCP43146 1447 aa9.16□□□□□ -0.94
ABCA4-205ENST00000472033 IGHA1P01876 353 aa9.16□□□□□ -0.94
ABCA4-205ENST00000472033 GDF6Q6KF10 455 aaPredicted RBP9.16□□□□□ -0.94
ABCA4-205ENST00000472033 ILDR2Q71H61 639 aa9.16□□□□□ -0.94
ABCA4-205ENST00000472033 NCAPG2Q86XI2 1143 aa9.16□□□□□ -0.94
ABCA4-205ENST00000472033 GJD3Q8N144 294 aa9.16□□□□□ -0.94
ABCA4-205ENST00000472033 C1orf127Q8N9H9 656 aa9.16□□□□□ -0.94
ABCA4-205ENST00000472033 STK26Q9P289 416 aa9.16□□□□□ -0.94
ABCA4-205ENST00000472033 BRPF3Q9ULD4 1205 aa9.16□□□□□ -0.94
ABCA4-205ENST00000472033 MSTNO14793 375 aa9.15□□□□□ -0.94
ABCA4-205ENST00000472033 KIF4AO95239 1232 aa9.15□□□□□ -0.94
ABCA4-205ENST00000472033 APBA3O96018 575 aa9.15□□□□□ -0.94
ABCA4-205ENST00000472033 CES1P23141 567 aa9.15□□□□□ -0.94
ABCA4-205ENST00000472033 ARHGAP4P98171 946 aa9.15□□□□□ -0.94
ABCA4-205ENST00000472033 ATP11AP98196 1134 aa9.15□□□□□ -0.94
ABCA4-205ENST00000472033 ECM1Q16610 540 aa9.15□□□□□ -0.94
ABCA4-205ENST00000472033 CD163Q86VB7 1156 aa9.15□□□□□ -0.94
ABCA4-205ENST00000472033 C14orf93Q9H972 538 aaKnown RBP9.15□□□□□ -0.94
ABCA4-205ENST00000472033 PTCH1Q13635 1447 aa9.14□□□□□ -0.95
ABCA4-205ENST00000472033 ADGRL3Q9HAR2 1447 aa9.14□□□□□ -0.95
ABCA4-205ENST00000472033 ROBO2Q9HCK4 1378 aa9.14□□□□□ -0.95
ABCA4-205ENST00000472033 C1QTNF9BB2RNN3 333 aa9.14□□□□□ -0.95
ABCA4-205ENST00000472033 CHRNA4P43681 627 aa9.14□□□□□ -0.95
ABCA4-205ENST00000472033 TMEM132EQ6IEE7 984 aa9.14□□□□□ -0.95
ABCA4-205ENST00000472033 BRINP3Q76B58 766 aa9.14□□□□□ -0.95
ABCA4-205ENST00000472033 SNX29Q8TEQ0 813 aa9.14□□□□□ -0.95
ABCA4-205ENST00000472033 SPOCK3Q9BQ16 436 aa9.14□□□□□ -0.95
ABCA4-205ENST00000472033 TRIM33Q9UPN9 1127 aa9.14□□□□□ -0.95
ABCA4-205ENST00000472033 MED1Q15648 1581 aaPredicted RBP9.14□□□□□ -0.95
ABCA4-205ENST00000472033 JCADQ9P266 1359 aa9.13□□□□□ -0.95
ABCA4-205ENST00000472033 NDUFB5O43674 189 aa9.13□□□□□ -0.95
ABCA4-205ENST00000472033 PHACTR2O75167 634 aa9.13□□□□□ -0.95
ABCA4-205ENST00000472033 TNFRSF21O75509 655 aa9.13□□□□□ -0.95
ABCA4-205ENST00000472033 SMNDC1O75940 238 aaKnown RBP eCLIP9.13□□□□□ -0.95
ABCA4-205ENST00000472033 GRIK4Q16099 956 aa9.13□□□□□ -0.95
ABCA4-205ENST00000472033 FMR1NBQ8N0W7 255 aaPredicted RBP9.13□□□□□ -0.95
ABCA4-205ENST00000472033 DCAF11Q8TEB1 546 aa9.13□□□□□ -0.95
ABCA4-205ENST00000472033 PMEPA1Q969W9 287 aa9.13□□□□□ -0.95
ABCA4-205ENST00000472033 RASSF4Q9H2L5 321 aa9.13□□□□□ -0.95
ABCA4-205ENST00000472033 CHRDQ9H2X0 955 aa9.13□□□□□ -0.95
ABCA4-205ENST00000472033 FOXD3Q9UJU5 478 aaPredicted RBP9.13□□□□□ -0.95
ABCA4-205ENST00000472033 GNEQ9Y223 722 aaKnown RBP9.13□□□□□ -0.95
ABCA4-205ENST00000472033 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.13□□□□□ -0.95
ABCA4-205ENST00000472033 PHLPP1O60346 1717 aa9.13□□□□□ -0.95
ABCA4-205ENST00000472033 PIK3C2GO75747 1445 aa9.13□□□□□ -0.95
ABCA4-205ENST00000472033 LRPPRCP42704 1394 aaKnown RBP9.12□□□□□ -0.95
ABCA4-205ENST00000472033 DHX57Q6P158 1386 aaKnown RBP9.12□□□□□ -0.95
ABCA4-205ENST00000472033 ABCC11Q96J66 1382 aa9.12□□□□□ -0.95
ABCA4-205ENST00000472033 SETD1AO15047 1707 aaKnown RBP9.12□□□□□ -0.95
ABCA4-205ENST00000472033 IFT172Q9UG01 1749 aa9.12□□□□□ -0.95
ABCA4-205ENST00000472033 SOWAHDA6NJG2 315 aa9.12□□□□□ -0.95
ABCA4-205ENST00000472033 ELNP15502 786 aa9.12□□□□□ -0.95
ABCA4-205ENST00000472033 CEP135Q66GS9 1140 aa9.12□□□□□ -0.95
ABCA4-205ENST00000472033 WAPLQ7Z5K2 1190 aa9.12□□□□□ -0.95
ABCA4-205ENST00000472033 DTWD1Q8N5C7 304 aa9.12□□□□□ -0.95
ABCA4-205ENST00000472033 IL22RA1Q8N6P7 574 aa9.12□□□□□ -0.95
ABCA4-205ENST00000472033 CEP120Q8N960 986 aa9.12□□□□□ -0.95
ABCA4-205ENST00000472033 LRRC59Q96AG4 307 aaKnown RBP9.12□□□□□ -0.95
ABCA4-205ENST00000472033 NACC1Q96RE7 527 aa9.12□□□□□ -0.95
ABCA4-205ENST00000472033 SALL4Q9UJQ4 1053 aa9.12□□□□□ -0.95
ABCA4-205ENST00000472033 MST1RQ04912 1400 aa9.12□□□□□ -0.95
ABCA4-205ENST00000472033 PRAG1Q86YV5 1406 aa9.12□□□□□ -0.95
ABCA4-205ENST00000472033 SPATA31A6Q5VVP1 1343 aa9.11□□□□□ -0.95
ABCA4-205ENST00000472033 PROCP04070 461 aa9.11□□□□□ -0.95
ABCA4-205ENST00000472033 BAG6P46379 1132 aa9.11□□□□□ -0.95
ABCA4-205ENST00000472033 PBX4Q9BYU1 374 aa9.11□□□□□ -0.95
ABCA4-205ENST00000472033 MYOM2P54296 1465 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms