RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 ZBTB47Q9UFB7 747 aaPredicted RBP24.38■■□□□ 1.49
NPHP4-206ENST00000468253 UNCXA6NJT0 531 aa24.37■■□□□ 1.49
NPHP4-206ENST00000468253 PPP4CP60510 307 aa24.37■■□□□ 1.49
NPHP4-206ENST00000468253 MAP3K12Q12852 859 aa24.37■■□□□ 1.49
NPHP4-206ENST00000468253 ANKRD45Q5TZF3 282 aa24.37■■□□□ 1.49
NPHP4-206ENST00000468253 NAA16Q6N069 864 aaPredicted RBP24.37■■□□□ 1.49
NPHP4-206ENST00000468253 TEPSINQ96N21 525 aa24.37■■□□□ 1.49
NPHP4-206ENST00000468253 NPM3O75607 178 aaKnown RBP24.36■■□□□ 1.49
NPHP4-206ENST00000468253 IGHDP01880 384 aa24.36■■□□□ 1.49
NPHP4-206ENST00000468253 HUNKP57058 714 aa24.36■■□□□ 1.49
NPHP4-206ENST00000468253 JMYQ8N9B5 988 aa24.36■■□□□ 1.49
NPHP4-206ENST00000468253 FAM151AQ8WW52 585 aa24.36■■□□□ 1.49
NPHP4-206ENST00000468253 BCL11AQ9H165 835 aa24.36■■□□□ 1.49
NPHP4-206ENST00000468253 BOLA2Q9H3K6 86 aa24.36■■□□□ 1.49
NPHP4-206ENST00000468253 MKRN1Q9UHC7 482 aaKnown RBP24.36■■□□□ 1.49
NPHP4-206ENST00000468253 PPP1R12BO60237 982 aaPredicted RBP24.35■■□□□ 1.49
NPHP4-206ENST00000468253 BAG3O95817 575 aa24.35■■□□□ 1.49
NPHP4-206ENST00000468253 ECE1P42892 770 aa24.35■■□□□ 1.49
NPHP4-206ENST00000468253 BTDP43251 543 aa24.35■■□□□ 1.49
NPHP4-206ENST00000468253 MAP3K11Q16584 847 aa24.35■■□□□ 1.49
NPHP4-206ENST00000468253 NBPF12Q5TAG4 269 aaPredicted RBP24.35■■□□□ 1.49
NPHP4-206ENST00000468253 ARMC9Q7Z3E5 817 aa24.35■■□□□ 1.49
NPHP4-206ENST00000468253 HOOK2Q96ED9 719 aa24.35■■□□□ 1.49
NPHP4-206ENST00000468253 ANTXR1Q9H6X2 564 aa24.35■■□□□ 1.49
NPHP4-206ENST00000468253 ENTPD3O75355 529 aa24.34■■□□□ 1.49
NPHP4-206ENST00000468253 IDH1O75874 414 aaKnown RBP24.34■■□□□ 1.49
NPHP4-206ENST00000468253 PLCG2P16885 1265 aa24.34■■□□□ 1.49
NPHP4-206ENST00000468253 VEGFBP49765 207 aa24.34■■□□□ 1.49
NPHP4-206ENST00000468253 CACNB3P54284 484 aa24.34■■□□□ 1.49
NPHP4-206ENST00000468253 RHBDL3P58872 404 aa24.34■■□□□ 1.49
NPHP4-206ENST00000468253 CERS3Q8IU89 383 aa24.34■■□□□ 1.49
NPHP4-206ENST00000468253 TTC41PQ6P2S7 1318 aa24.34■■□□□ 1.49
NPHP4-206ENST00000468253 CCDC102AQ96A19 550 aa24.33■■□□□ 1.49
NPHP4-206ENST00000468253 NOL10Q9BSC4 688 aaKnown RBP24.33■■□□□ 1.49
NPHP4-206ENST00000468253 TMEM39BQ9GZU3 492 aa24.33■■□□□ 1.49
NPHP4-206ENST00000468253 PAG1Q9NWQ8 432 aa24.33■■□□□ 1.49
NPHP4-206ENST00000468253 NDUFB9Q9Y6M9 179 aa24.33■■□□□ 1.49
NPHP4-206ENST00000468253 AKAP11Q9UKA4 1901 aa24.33■■□□□ 1.49
NPHP4-206ENST00000468253 TRPM7Q96QT4 1865 aa24.32■■□□□ 1.48
NPHP4-206ENST00000468253 MYH13Q9UKX3 1938 aa24.32■■□□□ 1.48
NPHP4-206ENST00000468253 GOLIM4O00461 696 aa24.32■■□□□ 1.48
NPHP4-206ENST00000468253 IRX6P78412 446 aaPredicted RBP24.32■■□□□ 1.48
NPHP4-206ENST00000468253 LDLRAD1Q5T700 205 aa24.32■■□□□ 1.48
NPHP4-206ENST00000468253 RGMBQ6NW40 437 aa24.32■■□□□ 1.48
NPHP4-206ENST00000468253 DNAJC2Q99543 621 aaKnown RBP24.32■■□□□ 1.48
NPHP4-206ENST00000468253 FAM198AQ9UFP1 575 aa24.32■■□□□ 1.48
NPHP4-206ENST00000468253 ERC2O15083 957 aa24.31■■□□□ 1.48
NPHP4-206ENST00000468253 WDHD1O75717 1129 aaPredicted RBP24.31■■□□□ 1.48
NPHP4-206ENST00000468253 CYP7A1P22680 504 aa24.31■■□□□ 1.48
NPHP4-206ENST00000468253 NFIAQ12857 509 aa24.31■■□□□ 1.48
NPHP4-206ENST00000468253 CAPNS2Q96L46 248 aa24.31■■□□□ 1.48
NPHP4-206ENST00000468253 WDR33Q9C0J8 1336 aaKnown RBP24.31■■□□□ 1.48
NPHP4-206ENST00000468253 UBE2Q2LH0YL09 131 aa24.3■■□□□ 1.48
NPHP4-206ENST00000468253 USP2O75604 605 aaPredicted RBP24.3■■□□□ 1.48
NPHP4-206ENST00000468253 MAP2K2P36507 400 aa24.3■■□□□ 1.48
NPHP4-206ENST00000468253 TTLL12Q14166 644 aaPredicted RBP24.3■■□□□ 1.48
NPHP4-206ENST00000468253 STAP2Q9UGK3 403 aa24.3■■□□□ 1.48
NPHP4-206ENST00000468253 GLRX3O76003 335 aaKnown RBP24.29■■□□□ 1.48
NPHP4-206ENST00000468253 SLC9C2Q5TAH2 1124 aa24.29■■□□□ 1.48
NPHP4-206ENST00000468253 MAGEB6Q8N7X4 407 aa24.29■■□□□ 1.48
NPHP4-206ENST00000468253 RPAP1Q9BWH6 1393 aaPredicted RBP24.29■■□□□ 1.48
NPHP4-206ENST00000468253 IREB2P48200 963 aaKnown RBP24.28■■□□□ 1.48
NPHP4-206ENST00000468253 RGS3P49796 1198 aa24.28■■□□□ 1.48
NPHP4-206ENST00000468253 ZNF157P51786 506 aaPredicted RBP24.28■■□□□ 1.48
NPHP4-206ENST00000468253 NUCB1Q02818 461 aa24.28■■□□□ 1.48
NPHP4-206ENST00000468253 CYP4F22Q6NT55 531 aa24.28■■□□□ 1.48
NPHP4-206ENST00000468253 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.28■■□□□ 1.48
NPHP4-206ENST00000468253 ANGEL1Q9UNK9 670 aaKnown RBP24.28■■□□□ 1.48
NPHP4-206ENST00000468253 SALL3Q9BXA9 1300 aa24.28■■□□□ 1.48
NPHP4-206ENST00000468253 PDE6AP16499 860 aa24.27■■□□□ 1.48
NPHP4-206ENST00000468253 MX1P20591 662 aa24.27■■□□□ 1.48
NPHP4-206ENST00000468253 TCP10Q12799 353 aa24.27■■□□□ 1.48
NPHP4-206ENST00000468253 MOB2Q70IA6 237 aa24.27■■□□□ 1.48
NPHP4-206ENST00000468253 ADGRA1Q86SQ6 560 aa24.27■■□□□ 1.48
NPHP4-206ENST00000468253 AATFQ9NY61 560 aaKnown RBP eCLIP24.27■■□□□ 1.48
NPHP4-206ENST00000468253 NOGQ13253 232 aa24.26■■□□□ 1.47
NPHP4-206ENST00000468253 DCAF15Q66K64 600 aa24.26■■□□□ 1.47
NPHP4-206ENST00000468253 ZSCAN25Q6NSZ9 544 aa24.26■■□□□ 1.47
NPHP4-206ENST00000468253 CHD1LQ86WJ1 897 aa24.26■■□□□ 1.47
NPHP4-206ENST00000468253 CDAN1Q8IWY9 1227 aa24.26■■□□□ 1.47
NPHP4-206ENST00000468253 ZFPM1Q8IX07 1006 aa24.26■■□□□ 1.47
NPHP4-206ENST00000468253 TEX11Q8IYF3 940 aa24.26■■□□□ 1.47
NPHP4-206ENST00000468253 PI4K2BQ8TCG2 481 aa24.26■■□□□ 1.47
NPHP4-206ENST00000468253 OTUD7AQ8TE49 926 aaPredicted RBP24.26■■□□□ 1.47
NPHP4-206ENST00000468253 EDC3Q96F86 508 aaKnown RBP24.26■■□□□ 1.47
NPHP4-206ENST00000468253 TCRBV5S4A2TA0A5A2 114 aa24.25■■□□□ 1.47
NPHP4-206ENST00000468253 FAM155AB1AL88 458 aaPredicted RBP24.25■■□□□ 1.47
NPHP4-206ENST00000468253 MAP3K10Q02779 954 aa24.25■■□□□ 1.47
NPHP4-206ENST00000468253 PRKG1Q13976 671 aa24.25■■□□□ 1.47
NPHP4-206ENST00000468253 UBE3CQ15386 1083 aa24.25■■□□□ 1.47
NPHP4-206ENST00000468253 PAXIP1Q6ZW49 1069 aaPredicted RBP24.25■■□□□ 1.47
NPHP4-206ENST00000468253 SH3RF3Q8TEJ3 882 aaPredicted RBP24.25■■□□□ 1.47
NPHP4-206ENST00000468253 DDX4Q9NQI0 724 aaKnown RBP24.25■■□□□ 1.47
NPHP4-206ENST00000468253 ECM29Q5VYK3 1845 aa24.25■■□□□ 1.47
NPHP4-206ENST00000468253 RFX7Q2KHR2 1363 aa24.25■■□□□ 1.47
NPHP4-206ENST00000468253 ADD2P35612 726 aa24.24■■□□□ 1.47
NPHP4-206ENST00000468253 PDE1AP54750 535 aa24.24■■□□□ 1.47
NPHP4-206ENST00000468253 MAP3K9P80192 1104 aa24.24■■□□□ 1.47
NPHP4-206ENST00000468253 B4GALNT3Q6L9W6 998 aa24.24■■□□□ 1.47
NPHP4-206ENST00000468253 ANKRD13AQ8IZ07 590 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms