RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 DTHD1Q6ZMT9 781 aa15.71■□□□□ 0.11
BRAT1-203ENST00000467558 SMARCC2Q8TAQ2 1214 aa15.71■□□□□ 0.11
BRAT1-203ENST00000467558 V9GY48 417 aaPredicted RBP15.71■□□□□ 0.11
BRAT1-203ENST00000467558 UBE3CQ15386 1083 aa15.71■□□□□ 0.11
BRAT1-203ENST00000467558 KIF4BQ2VIQ3 1234 aa15.71■□□□□ 0.11
BRAT1-203ENST00000467558 DIS3L2Q8IYB7 885 aaKnown RBP15.71■□□□□ 0.11
BRAT1-203ENST00000467558 TLR7Q9NYK1 1049 aaKnown RBP15.71■□□□□ 0.11
BRAT1-203ENST00000467558 THRAP3Q9Y2W1 955 aaKnown RBP15.71■□□□□ 0.11
BRAT1-203ENST00000467558 A0A1B0GVL5 298 aa15.71■□□□□ 0.11
BRAT1-203ENST00000467558 ERLIN2O94905 339 aa15.71■□□□□ 0.11
BRAT1-203ENST00000467558 TNNI2P48788 182 aa15.71■□□□□ 0.11
BRAT1-203ENST00000467558 CETN1Q12798 172 aa15.71■□□□□ 0.11
BRAT1-203ENST00000467558 KRT79Q5XKE5 535 aa15.71■□□□□ 0.11
BRAT1-203ENST00000467558 CCDC186Q7Z3E2 898 aa15.71■□□□□ 0.11
BRAT1-203ENST00000467558 NLRP10Q86W26 655 aa15.71■□□□□ 0.11
BRAT1-203ENST00000467558 TRPC5Q9UL62 973 aaPredicted RBP15.71■□□□□ 0.11
BRAT1-203ENST00000467558 SAMM50Q9Y512 469 aa15.71■□□□□ 0.11
BRAT1-203ENST00000467558 ZC3H13Q5T200 1668 aaKnown RBP15.71■□□□□ 0.11
BRAT1-203ENST00000467558 SPDYE3A6NKU9 549 aa15.71■□□□□ 0.1
BRAT1-203ENST00000467558 H0YIN7 160 aa15.71■□□□□ 0.1
BRAT1-203ENST00000467558 USO1O60763 962 aaKnown RBP15.71■□□□□ 0.1
BRAT1-203ENST00000467558 WDHD1O75717 1129 aaPredicted RBP15.71■□□□□ 0.1
BRAT1-203ENST00000467558 CHRNDQ07001 517 aa15.71■□□□□ 0.1
BRAT1-203ENST00000467558 UBE4AQ14139 1066 aa15.71■□□□□ 0.1
BRAT1-203ENST00000467558 USPL1Q5W0Q7 1092 aa15.71■□□□□ 0.1
BRAT1-203ENST00000467558 ELP1O95163 1332 aa15.7■□□□□ 0.1
BRAT1-203ENST00000467558 JAK2O60674 1132 aa15.7■□□□□ 0.1
BRAT1-203ENST00000467558 TBCAO75347 108 aaKnown RBP15.7■□□□□ 0.1
BRAT1-203ENST00000467558 MCM7P33993 719 aa15.7■□□□□ 0.1
BRAT1-203ENST00000467558 BCAMP50895 628 aa15.7■□□□□ 0.1
BRAT1-203ENST00000467558 NRXN1Q9ULB1 1477 aa15.7■□□□□ 0.1
BRAT1-203ENST00000467558 ALDH1B1P30837 517 aa15.7■□□□□ 0.1
BRAT1-203ENST00000467558 GYG1P46976 350 aa15.7■□□□□ 0.1
BRAT1-203ENST00000467558 LEO1Q8WVC0 666 aaPredicted RBP15.7■□□□□ 0.1
BRAT1-203ENST00000467558 GTPBP4Q9BZE4 634 aaKnown RBP15.7■□□□□ 0.1
BRAT1-203ENST00000467558 TNS3Q68CZ2 1445 aa15.7■□□□□ 0.1
BRAT1-203ENST00000467558 FGAP02671 866 aa15.7■□□□□ 0.1
BRAT1-203ENST00000467558 ASIC1P78348 528 aa15.7■□□□□ 0.1
BRAT1-203ENST00000467558 TDRD12Q587J7 1177 aaKnown RBP15.7■□□□□ 0.1
BRAT1-203ENST00000467558 KIAA1210Q9ULL0 1709 aa15.7■□□□□ 0.1
BRAT1-203ENST00000467558 ADAMTS13Q76LX8 1427 aa15.7■□□□□ 0.1
BRAT1-203ENST00000467558 APBA3O96018 575 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 LMOD1P29536 600 aaPredicted RBP15.69■□□□□ 0.1
BRAT1-203ENST00000467558 MTX1Q13505 466 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 TCERG1LQ5VWI1 586 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 IFNL3Q8IZI9 196 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 FLAD1Q8NFF5 587 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 HS1BP3Q53T59 392 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 CDC37L1Q7L3B6 337 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 LMBRD1Q9NUN5 540 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 PIK3C2BO00750 1634 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 PHKA1P46020 1223 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 MRPL12P52815 198 aaKnown RBP15.69■□□□□ 0.1
BRAT1-203ENST00000467558 ZMYM1Q5SVZ6 1142 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 H7C1W4 665 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 KRT40Q6A162 431 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 OTUD7BQ6GQQ9 843 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 RASEFQ8IZ41 740 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 MYL10Q9BUA6 226 aa15.69■□□□□ 0.1
BRAT1-203ENST00000467558 SASH1O94885 1247 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 PPARAQ07869 468 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 ARPP21Q9UBL0 812 aaPredicted RBP15.68■□□□□ 0.1
BRAT1-203ENST00000467558 RGS12O14924 1447 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 POTEJP0CG39 1038 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 ADORA1P30542 326 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 CASQ1P31415 396 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 PHKBQ93100 1093 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 TPCN1Q9ULQ1 816 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 PTPRUQ92729 1446 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 USP17L12C9JPN9 530 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 USP17L21D6R901 530 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 EIF3JO75822 258 aaKnown RBP15.68■□□□□ 0.1
BRAT1-203ENST00000467558 IGKV5-2P06315 115 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 SKILP12757 684 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 PRM3Q9NNZ6 103 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 ZKSCAN5Q9Y2L8 839 aa15.68■□□□□ 0.1
BRAT1-203ENST00000467558 POLR1AO95602 1720 aaPredicted RBP15.68■□□□□ 0.1
BRAT1-203ENST00000467558 CNKSR2Q8WXI2 1034 aa15.67■□□□□ 0.1
BRAT1-203ENST00000467558 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.67■□□□□ 0.1
BRAT1-203ENST00000467558 ZNF445P59923 1031 aa15.67■□□□□ 0.1
BRAT1-203ENST00000467558 SNW1Q13573 536 aaKnown RBP15.67■□□□□ 0.1
BRAT1-203ENST00000467558 PDCL2Q8N4E4 241 aa15.67■□□□□ 0.1
BRAT1-203ENST00000467558 PFKFB2O60825 505 aa15.67■□□□□ 0.1
BRAT1-203ENST00000467558 HSP90AA4PQ58FG1 418 aa15.67■□□□□ 0.1
BRAT1-203ENST00000467558 VWA3AA6NCI4 1184 aa15.67■□□□□ 0.1
BRAT1-203ENST00000467558 TRIM21P19474 475 aaKnown RBP15.67■□□□□ 0.1
BRAT1-203ENST00000467558 ATP2B4P23634 1241 aa15.67■□□□□ 0.1
BRAT1-203ENST00000467558 ZNF174Q15697 407 aa15.67■□□□□ 0.1
BRAT1-203ENST00000467558 SYCP3Q8IZU3 236 aa15.67■□□□□ 0.1
BRAT1-203ENST00000467558 TRMT1LQ7Z2T5 733 aaKnown RBP15.66■□□□□ 0.1
BRAT1-203ENST00000467558 NAP1L4Q99733 375 aaKnown RBP15.66■□□□□ 0.1
BRAT1-203ENST00000467558 SH2D4AQ9H788 454 aa15.66■□□□□ 0.1
BRAT1-203ENST00000467558 OVOS2A0A0J9YW53 1432 aa15.66■□□□□ 0.1
BRAT1-203ENST00000467558 OVOS2Q6IE36 1432 aa15.66■□□□□ 0.1
BRAT1-203ENST00000467558 TFAP4Q01664 338 aa15.66■□□□□ 0.1
BRAT1-203ENST00000467558 MFSD14BQ5SR56 506 aa15.66■□□□□ 0.1
BRAT1-203ENST00000467558 AXDND1Q5T1B0 1012 aaPredicted RBP15.66■□□□□ 0.1
BRAT1-203ENST00000467558 MAPKAPK5Q8IW41 473 aa15.66■□□□□ 0.1
BRAT1-203ENST00000467558 C1orf167Q5SNV9 1468 aa15.66■□□□□ 0.1
BRAT1-203ENST00000467558 CUTAO60888 179 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms