RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 MROH5Q6ZUA9 1318 aa19.66■□□□□ 0.74
ACTB-207ENST00000462494 ZBTB43O43298 467 aa19.66■□□□□ 0.74
ACTB-207ENST00000462494 IL6STP40189 918 aaPredicted RBP19.66■□□□□ 0.74
ACTB-207ENST00000462494 CTDSPL2Q05D32 466 aa19.66■□□□□ 0.74
ACTB-207ENST00000462494 TMEM67Q5HYA8 995 aa19.66■□□□□ 0.74
ACTB-207ENST00000462494 MBD4O95243 580 aa19.65■□□□□ 0.74
ACTB-207ENST00000462494 SLC3A2P08195 630 aaKnown RBP19.65■□□□□ 0.74
ACTB-207ENST00000462494 SLC5A1P13866 664 aa19.65■□□□□ 0.74
ACTB-207ENST00000462494 PFKFB1P16118 471 aa19.65■□□□□ 0.74
ACTB-207ENST00000462494 KRT40Q6A162 431 aa19.65■□□□□ 0.74
ACTB-207ENST00000462494 VPS37DQ86XT2 251 aa19.65■□□□□ 0.74
ACTB-207ENST00000462494 ZNF34Q8IZ26 560 aa19.65■□□□□ 0.74
ACTB-207ENST00000462494 MPHOSPH8Q99549 860 aa19.65■□□□□ 0.74
ACTB-207ENST00000462494 NAPBQ9H115 298 aa19.65■□□□□ 0.74
ACTB-207ENST00000462494 C4AP0C0L4 1744 aa19.65■□□□□ 0.74
ACTB-207ENST00000462494 C4BP0C0L5 1744 aa19.65■□□□□ 0.74
ACTB-207ENST00000462494 NUP98P52948 1817 aa19.64■□□□□ 0.74
ACTB-207ENST00000462494 DDX60Q8IY21 1712 aaKnown RBP19.64■□□□□ 0.74
ACTB-207ENST00000462494 WDHD1O75717 1129 aaPredicted RBP19.64■□□□□ 0.74
ACTB-207ENST00000462494 TNNT1P13805 278 aa19.64■□□□□ 0.74
ACTB-207ENST00000462494 FGFR2P21802 821 aa19.64■□□□□ 0.74
ACTB-207ENST00000462494 TMEM87BQ96K49 555 aa19.64■□□□□ 0.74
ACTB-207ENST00000462494 ARMT1Q9H993 441 aa19.64■□□□□ 0.74
ACTB-207ENST00000462494 BCL2L12Q9HB09 334 aa19.64■□□□□ 0.74
ACTB-207ENST00000462494 ANKRD36CQ5JPF3 1778 aa19.64■□□□□ 0.73
ACTB-207ENST00000462494 GOLGA8AA7E2F4 631 aa19.64■□□□□ 0.73
ACTB-207ENST00000462494 PATL2C9JE40 543 aaKnown RBP19.64■□□□□ 0.73
ACTB-207ENST00000462494 MAP3K12Q12852 859 aa19.64■□□□□ 0.73
ACTB-207ENST00000462494 RASGRF1Q13972 1273 aa19.64■□□□□ 0.73
ACTB-207ENST00000462494 AXDND1Q5T1B0 1012 aaPredicted RBP19.64■□□□□ 0.73
ACTB-207ENST00000462494 SUSD4Q5VX71 490 aa19.64■□□□□ 0.73
ACTB-207ENST00000462494 IFNL3Q8IZI9 196 aa19.64■□□□□ 0.73
ACTB-207ENST00000462494 IGDCC4Q8TDY8 1250 aa19.64■□□□□ 0.73
ACTB-207ENST00000462494 SEC31BQ9NQW1 1179 aa19.64■□□□□ 0.73
ACTB-207ENST00000462494 IARSP41252 1262 aaKnown RBP19.63■□□□□ 0.73
ACTB-207ENST00000462494 SLC39A14Q15043 492 aa19.63■□□□□ 0.73
ACTB-207ENST00000462494 ISM2Q6H9L7 571 aa19.63■□□□□ 0.73
ACTB-207ENST00000462494 LY9Q9HBG7 655 aa19.63■□□□□ 0.73
ACTB-207ENST00000462494 EPB41L4AQ9HCS5 686 aaPredicted RBP19.63■□□□□ 0.73
ACTB-207ENST00000462494 IFIT3O14879 490 aaKnown RBP19.63■□□□□ 0.73
ACTB-207ENST00000462494 CMA1P23946 247 aa19.63■□□□□ 0.73
ACTB-207ENST00000462494 TRIM29Q14134 588 aa19.63■□□□□ 0.73
ACTB-207ENST00000462494 STK11IPQ8N1F8 1099 aa19.63■□□□□ 0.73
ACTB-207ENST00000462494 MROH7-TTC4A0A0A0MT08 1334 aa19.62■□□□□ 0.73
ACTB-207ENST00000462494 STRCQ7RTU9 1775 aa19.62■□□□□ 0.73
ACTB-207ENST00000462494 CCDC69A6NI79 296 aa19.62■□□□□ 0.73
ACTB-207ENST00000462494 SKILP12757 684 aa19.62■□□□□ 0.73
ACTB-207ENST00000462494 RRP12Q5JTH9 1297 aaKnown RBP19.62■□□□□ 0.73
ACTB-207ENST00000462494 TOMM22Q9NS69 142 aa19.62■□□□□ 0.73
ACTB-207ENST00000462494 ZSWIM5Q9P217 1185 aa19.62■□□□□ 0.73
ACTB-207ENST00000462494 DISP2A7MBM2 1401 aa19.62■□□□□ 0.73
ACTB-207ENST00000462494 UBE2Q2LH0YL09 131 aa19.61■□□□□ 0.73
ACTB-207ENST00000462494 SLC12A7Q9Y666 1083 aa19.61■□□□□ 0.73
ACTB-207ENST00000462494 RANBP6O60518 1105 aaKnown RBP19.61■□□□□ 0.73
ACTB-207ENST00000462494 NEMFO60524 1076 aa19.61■□□□□ 0.73
ACTB-207ENST00000462494 SMC2O95347 1197 aa19.61■□□□□ 0.73
ACTB-207ENST00000462494 SLC26A6Q9BXS9 759 aa19.61■□□□□ 0.73
ACTB-207ENST00000462494 PRKAB2O43741 272 aa19.6■□□□□ 0.73
ACTB-207ENST00000462494 SYKP43405 635 aa19.6■□□□□ 0.73
ACTB-207ENST00000462494 NLRP12P59046 1061 aa19.6■□□□□ 0.73
ACTB-207ENST00000462494 ALX1Q15699 326 aa19.6■□□□□ 0.73
ACTB-207ENST00000462494 ZNF592Q92610 1267 aa19.6■□□□□ 0.73
ACTB-207ENST00000462494 TDO2P48775 406 aa19.6■□□□□ 0.73
ACTB-207ENST00000462494 BCAMP50895 628 aa19.6■□□□□ 0.73
ACTB-207ENST00000462494 NTRK3Q16288 839 aa19.6■□□□□ 0.73
ACTB-207ENST00000462494 ZKSCAN3Q9BRR0 538 aa19.6■□□□□ 0.73
ACTB-207ENST00000462494 UTP14AQ9BVJ6 771 aaKnown RBP19.6■□□□□ 0.73
ACTB-207ENST00000462494 FAM217BQ9NTX9 383 aaPredicted RBP19.6■□□□□ 0.73
ACTB-207ENST00000462494 USP27XA6NNY8 438 aa19.59■□□□□ 0.73
ACTB-207ENST00000462494 SSRP1Q08945 709 aaKnown RBP19.59■□□□□ 0.73
ACTB-207ENST00000462494 MFSD6Q6ZSS7 791 aa19.59■□□□□ 0.73
ACTB-207ENST00000462494 SGMS1Q86VZ5 419 aa19.59■□□□□ 0.73
ACTB-207ENST00000462494 JMYQ8N9B5 988 aa19.59■□□□□ 0.73
ACTB-207ENST00000462494 TACC3Q9Y6A5 838 aa19.59■□□□□ 0.73
ACTB-207ENST00000462494 NHSL1Q5SYE7 1610 aa19.59■□□□□ 0.73
ACTB-207ENST00000462494 GSG1L2A8MUP6 293 aa19.59■□□□□ 0.73
ACTB-207ENST00000462494 RBM6P78332 1123 aaKnown RBP19.59■□□□□ 0.73
ACTB-207ENST00000462494 AKNAD1Q5T1N1 836 aa19.59■□□□□ 0.73
ACTB-207ENST00000462494 CLIC6Q96NY7 704 aa19.59■□□□□ 0.73
ACTB-207ENST00000462494 BPIFA3Q9BQP9 254 aa19.59■□□□□ 0.73
ACTB-207ENST00000462494 IFNKQ9P0W0 207 aa19.59■□□□□ 0.73
ACTB-207ENST00000462494 SLC4A4Q9Y6R1 1079 aa19.59■□□□□ 0.73
ACTB-207ENST00000462494 SLIT2O94813 1529 aa19.59■□□□□ 0.73
ACTB-207ENST00000462494 ATP6V1AP38606 617 aa19.58■□□□□ 0.73
ACTB-207ENST00000462494 EIF5P55010 431 aaKnown RBP19.58■□□□□ 0.73
ACTB-207ENST00000462494 TPM4P67936 248 aa19.58■□□□□ 0.73
ACTB-207ENST00000462494 SHC4Q6S5L8 630 aa19.58■□□□□ 0.73
ACTB-207ENST00000462494 NBPF11Q86T75 865 aa19.58■□□□□ 0.73
ACTB-207ENST00000462494 LCORLQ8N3X6 602 aa19.58■□□□□ 0.73
ACTB-207ENST00000462494 MIGA1Q8NAN2 632 aa19.58■□□□□ 0.73
ACTB-207ENST00000462494 ACSBG1Q96GR2 724 aa19.58■□□□□ 0.73
ACTB-207ENST00000462494 AK7Q96M32 723 aa19.58■□□□□ 0.73
ACTB-207ENST00000462494 XPO4Q9C0E2 1151 aaKnown RBP19.58■□□□□ 0.73
ACTB-207ENST00000462494 SMTNL1A8MU46 457 aa19.57■□□□□ 0.72
ACTB-207ENST00000462494 PPP6R2O75170 966 aa19.57■□□□□ 0.72
ACTB-207ENST00000462494 LIFRP42702 1097 aa19.57■□□□□ 0.72
ACTB-207ENST00000462494 CCZ1BP86790 482 aa19.57■□□□□ 0.72
ACTB-207ENST00000462494 CCZ1P86791 482 aaPredicted RBP19.57■□□□□ 0.72
ACTB-207ENST00000462494 INTS5Q6P9B9 1019 aaKnown RBP19.57■□□□□ 0.72
ACTB-207ENST00000462494 CCDC82Q8N4S0 544 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms