RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 HOXB7P09629 217 aa6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 LBX1P52954 281 aa6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 RPS8P62241 208 aaKnown RBP6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 WASHC4Q2M389 1173 aa6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 MSS51Q4VC12 460 aa6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 CYP4F22Q6NT55 531 aa6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 ZBTB38Q8NAP3 1195 aaPredicted RBP6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 TRPM4Q8TD43 1214 aa6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 ADAMTS19Q8TE59 1207 aa6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 CALR3Q96L12 384 aaKnown RBP6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 ZNF408Q9H9D4 720 aa6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 ADARB2Q9NS39 739 aaKnown RBP6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 IFT57Q9NWB7 429 aa6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 MAP3K2Q9Y2U5 619 aa6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 H7C1D1 291 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 AOC2O75106 756 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 DXOO77932 396 aaKnown RBP6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 CELF2O95319 508 aaKnown RBP6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 EGFRP00533 1210 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 TRIM28Q13263 835 aaKnown RBP6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 TNIP1Q15025 636 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 PTPRNQ16849 979 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 TJAP1Q5JTD0 557 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 G2E3Q7L622 706 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 USP48Q86UV5 1035 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 TBC1D16Q8TBP0 767 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 AIDAQ96BJ3 306 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 CAPNS2Q96L46 248 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 NUDT12Q9BQG2 462 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 METTL22Q9BUU2 404 aaPredicted RBP6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 IL21Q9HBE4 155 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 ANKIB1Q9P2G1 1089 aa6.04□□□□□ -1.44
GTF3C3-208ENST00000455546 DUOX1Q9NRD9 1551 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 PI4KAP2A4QPH2 592 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 ECE2O60344 883 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 PDE8AO60658 829 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 PCCAP05165 728 aaPredicted RBP6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 CCNYL3P0C7X3 344 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 CTCFP49711 727 aaPredicted RBP6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 CALD1Q05682 793 aaKnown RBP6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 CWF19L2Q2TBE0 894 aaKnown RBP6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 TBC1D10BQ4KMP7 808 aaPredicted RBP6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 CCDC30Q5VVM6 783 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 KSR2Q6VAB6 950 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 NYAP1Q6ZVC0 841 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 SAPCD2Q86UD0 394 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 PI4KAP1Q8N8J0 262 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 CCDC191Q8NCU4 936 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 ZIC5Q96T25 663 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 SLC6A16Q9GZN6 736 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 CWC25Q9NXE8 425 aaPredicted RBP6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 PGAP2Q9UHJ9 254 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 SCAF8Q9UPN6 1271 aaKnown RBP6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 TLL2Q9Y6L7 1015 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 SPEF2Q9C093 1822 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 MYH3P11055 1940 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 RTL9Q8NET4 1388 aa6.03□□□□□ -1.44
GTF3C3-208ENST00000455546 ASTN2O75129 1339 aaPredicted RBP6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 UFL1O94874 794 aa6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 DDX58O95786 925 aaKnown RBP6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 S1PR4O95977 384 aa6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 IGKV5-2P06315 115 aa6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 HSPA8P11142 646 aaKnown RBP6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 MMP16P51512 607 aa6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 MAP2K1Q02750 393 aaPredicted RBP6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 CCDC152Q4G0S7 254 aa6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 CDC37L1Q7L3B6 337 aa6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 TMC4Q7Z404 712 aa6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 DPF2Q92785 391 aa6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 MXD3Q9BW11 206 aa6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 ZC3H12CQ9C0D7 883 aaKnown RBP6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 PRDM10Q9NQV6 1147 aa6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 FKBPLQ9UIM3 349 aa6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 CACNA1FO60840 1977 aa6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 LRRC37AA6NMS7 1700 aa6.02□□□□□ -1.45
GTF3C3-208ENST00000455546 ADM5C9JUS6 153 aa6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 VIL1P09327 827 aaKnown RBP6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 FBXO45P0C2W1 286 aa6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 ECE1P42892 770 aa6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 TWISTNBQ3B726 338 aaPredicted RBP6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 KRT26Q7Z3Y9 468 aa6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 ANKRD18AQ8IVF6 992 aa6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 TTLL11Q8NHH1 800 aa6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 RNF166Q96A37 237 aaPredicted RBP6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 DCPSQ96C86 337 aaKnown RBP6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 EYA3Q99504 573 aa6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 GREM2Q9H772 168 aa6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 MRS2Q9HD23 443 aa6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 PODXL2Q9NZ53 605 aa6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 GGA1Q9UJY5 639 aa6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 SERPINA10Q9UK55 444 aa6.01□□□□□ -1.45
GTF3C3-208ENST00000455546 AKAP11Q9UKA4 1901 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 NEURL1BA8MQ27 555 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 F6X3S4 739 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 H7C1W4 665 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 VAMP4O75379 141 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 CTSWP56202 376 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 HUNKP57058 714 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 EXOSC9Q06265 439 aaKnown RBP6□□□□□ -1.45
GTF3C3-208ENST00000455546 KCNH2Q12809 1159 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms