RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 KCNH4Q9UQ05 1017 aa21.79■■□□□ 1.08
UBE2D4-209ENST00000454428 MYPNQ86TC9 1320 aa21.79■■□□□ 1.08
UBE2D4-209ENST00000454428 SOX1O00570 391 aaPredicted RBP21.78■■□□□ 1.08
UBE2D4-209ENST00000454428 ZBTB7BO15156 539 aaPredicted RBP21.78■■□□□ 1.08
UBE2D4-209ENST00000454428 CCDC184Q52MB2 194 aa21.78■■□□□ 1.08
UBE2D4-209ENST00000454428 RAET1EQ8TD07 263 aa21.78■■□□□ 1.08
UBE2D4-209ENST00000454428 MRIQ9BWK5 157 aa21.78■■□□□ 1.08
UBE2D4-209ENST00000454428 CUL9Q8IWT3 2517 aa21.77■■□□□ 1.08
UBE2D4-209ENST00000454428 SUCLG2Q96I99 432 aa21.77■■□□□ 1.08
UBE2D4-209ENST00000454428 HTATIP2Q9BUP3 242 aa21.77■■□□□ 1.08
UBE2D4-209ENST00000454428 RNF208Q9H0X6 261 aa21.77■■□□□ 1.08
UBE2D4-209ENST00000454428 UNC80Q8N2C7 3258 aa21.77■■□□□ 1.08
UBE2D4-209ENST00000454428 FMNL1O95466 1100 aaPredicted RBP21.76■■□□□ 1.07
UBE2D4-209ENST00000454428 HOXD10P28358 340 aa21.76■■□□□ 1.07
UBE2D4-209ENST00000454428 PRKCZQ05513 592 aa21.76■■□□□ 1.07
UBE2D4-209ENST00000454428 VGLL2Q8N8G2 317 aa21.76■■□□□ 1.07
UBE2D4-209ENST00000454428 SLC17A8Q8NDX2 589 aa21.76■■□□□ 1.07
UBE2D4-209ENST00000454428 TBC1D22AQ8WUA7 517 aa21.76■■□□□ 1.07
UBE2D4-209ENST00000454428 ZNF341Q9BYN7 854 aa21.76■■□□□ 1.07
UBE2D4-209ENST00000454428 ZNF112Q9UJU3 913 aa21.76■■□□□ 1.07
UBE2D4-209ENST00000454428 MROH5Q6ZUA9 1318 aa21.76■■□□□ 1.07
UBE2D4-209ENST00000454428 ALPK3Q96L96 1907 aa21.75■■□□□ 1.07
UBE2D4-209ENST00000454428 BCRP11274 1271 aa21.75■■□□□ 1.07
UBE2D4-209ENST00000454428 LRRC24Q50LG9 513 aa21.75■■□□□ 1.07
UBE2D4-209ENST00000454428 DCAF15Q66K64 600 aa21.75■■□□□ 1.07
UBE2D4-209ENST00000454428 U2AF1L4Q8WU68 220 aaKnown RBP21.75■■□□□ 1.07
UBE2D4-209ENST00000454428 HOOK2Q96ED9 719 aa21.75■■□□□ 1.07
UBE2D4-209ENST00000454428 UNC93B1Q9H1C4 597 aa21.75■■□□□ 1.07
UBE2D4-209ENST00000454428 GABRQQ9UN88 632 aa21.75■■□□□ 1.07
UBE2D4-209ENST00000454428 BCAMP50895 628 aa21.74■■□□□ 1.07
UBE2D4-209ENST00000454428 EXOSC9Q06265 439 aaKnown RBP21.74■■□□□ 1.07
UBE2D4-209ENST00000454428 GPAT2Q6NUI2 795 aa21.74■■□□□ 1.07
UBE2D4-209ENST00000454428 TMOD2Q9NZR1 351 aa21.74■■□□□ 1.07
UBE2D4-209ENST00000454428 FARP2O94887 1054 aaPredicted RBP21.73■■□□□ 1.07
UBE2D4-209ENST00000454428 HHIPL2Q6UWX4 724 aa21.73■■□□□ 1.07
UBE2D4-209ENST00000454428 VPS37DQ86XT2 251 aa21.73■■□□□ 1.07
UBE2D4-209ENST00000454428 LRCH3Q96II8 777 aa21.73■■□□□ 1.07
UBE2D4-209ENST00000454428 C9orf78Q9NZ63 289 aaPredicted RBP21.73■■□□□ 1.07
UBE2D4-209ENST00000454428 NR2E3Q9Y5X4 410 aa21.73■■□□□ 1.07
UBE2D4-209ENST00000454428 NBPF7P0C2Y1 421 aaPredicted RBP21.72■■□□□ 1.07
UBE2D4-209ENST00000454428 CYP2C8P10632 490 aa21.72■■□□□ 1.07
UBE2D4-209ENST00000454428 A0A1W2PPC1 479 aa21.71■■□□□ 1.07
UBE2D4-209ENST00000454428 ALDH1L1O75891 902 aa21.71■■□□□ 1.07
UBE2D4-209ENST00000454428 SGPL1O95470 568 aa21.71■■□□□ 1.07
UBE2D4-209ENST00000454428 UBXN2AP68543 259 aa21.71■■□□□ 1.07
UBE2D4-209ENST00000454428 NCBP3Q53F19 620 aaKnown RBP21.71■■□□□ 1.07
UBE2D4-209ENST00000454428 NOL9Q5SY16 702 aaKnown RBP21.71■■□□□ 1.07
UBE2D4-209ENST00000454428 SLAIN1Q8ND83 568 aa21.71■■□□□ 1.07
UBE2D4-209ENST00000454428 FAM151AQ8WW52 585 aa21.71■■□□□ 1.07
UBE2D4-209ENST00000454428 BIN2Q9UBW5 565 aaPredicted RBP21.71■■□□□ 1.07
UBE2D4-209ENST00000454428 SUGT1Q9Y2Z0 365 aa21.71■■□□□ 1.07
UBE2D4-209ENST00000454428 FRAT2O75474 233 aaPredicted RBP21.7■■□□□ 1.06
UBE2D4-209ENST00000454428 PDE8BO95263 885 aa21.7■■□□□ 1.06
UBE2D4-209ENST00000454428 FCGRTP55899 365 aa21.7■■□□□ 1.06
UBE2D4-209ENST00000454428 NFIAQ12857 509 aa21.7■■□□□ 1.06
UBE2D4-209ENST00000454428 RABL6Q3YEC7 729 aaPredicted RBP21.7■■□□□ 1.06
UBE2D4-209ENST00000454428 CAVIN4Q5BKX8 364 aa21.7■■□□□ 1.06
UBE2D4-209ENST00000454428 UTYO14607 1347 aa21.7■■□□□ 1.06
UBE2D4-209ENST00000454428 MYH13Q9UKX3 1938 aa21.7■■□□□ 1.06
UBE2D4-209ENST00000454428 AK9Q5TCS8 1911 aa21.69■■□□□ 1.06
UBE2D4-209ENST00000454428 METTL24Q5JXM2 366 aa21.69■■□□□ 1.06
UBE2D4-209ENST00000454428 ANKRD44Q8N8A2 993 aa21.69■■□□□ 1.06
UBE2D4-209ENST00000454428 PARK7Q99497 189 aaKnown RBP21.69■■□□□ 1.06
UBE2D4-209ENST00000454428 BICC1Q9H694 974 aaKnown RBP21.69■■□□□ 1.06
UBE2D4-209ENST00000454428 SPINK5Q9NQ38 1064 aaPredicted RBP21.69■■□□□ 1.06
UBE2D4-209ENST00000454428 MAST3O60307 1309 aa21.69■■□□□ 1.06
UBE2D4-209ENST00000454428 PTPRFP10586 1907 aa21.68■■□□□ 1.06
UBE2D4-209ENST00000454428 ELNP15502 786 aa21.68■■□□□ 1.06
UBE2D4-209ENST00000454428 FGFR2P21802 821 aa21.68■■□□□ 1.06
UBE2D4-209ENST00000454428 TCP10Q12799 353 aa21.68■■□□□ 1.06
UBE2D4-209ENST00000454428 CDC42EP5Q6NZY7 148 aa21.68■■□□□ 1.06
UBE2D4-209ENST00000454428 SRCIN1Q9C0H9 1055 aa21.68■■□□□ 1.06
UBE2D4-209ENST00000454428 STAP2Q9UGK3 403 aa21.68■■□□□ 1.06
UBE2D4-209ENST00000454428 DAGLAQ9Y4D2 1042 aa21.68■■□□□ 1.06
UBE2D4-209ENST00000454428 ATRNL1Q5VV63 1379 aa21.68■■□□□ 1.06
UBE2D4-209ENST00000454428 DOCK3Q8IZD9 2030 aa21.67■■□□□ 1.06
UBE2D4-209ENST00000454428 ADCY3O60266 1144 aa21.67■■□□□ 1.06
UBE2D4-209ENST00000454428 FLT3LGP49771 235 aa21.67■■□□□ 1.06
UBE2D4-209ENST00000454428 SLC4A10Q6U841 1118 aa21.67■■□□□ 1.06
UBE2D4-209ENST00000454428 KLHDC4Q8TBB5 520 aa21.67■■□□□ 1.06
UBE2D4-209ENST00000454428 FAM198AQ9UFP1 575 aa21.67■■□□□ 1.06
UBE2D4-209ENST00000454428 KIF16BQ96L93 1317 aa21.66■■□□□ 1.06
UBE2D4-209ENST00000454428 CXCL11O14625 94 aa21.66■■□□□ 1.06
UBE2D4-209ENST00000454428 EVI5O60447 810 aa21.66■■□□□ 1.06
UBE2D4-209ENST00000454428 INHAP05111 366 aa21.66■■□□□ 1.06
UBE2D4-209ENST00000454428 DIXDC1Q155Q3 683 aa21.66■■□□□ 1.06
UBE2D4-209ENST00000454428 WDR63Q8IWG1 891 aa21.66■■□□□ 1.06
UBE2D4-209ENST00000454428 ZFPM1Q8IX07 1006 aa21.66■■□□□ 1.06
UBE2D4-209ENST00000454428 PAK6Q9NQU5 681 aaPredicted RBP21.66■■□□□ 1.06
UBE2D4-209ENST00000454428 PHIPQ8WWQ0 1821 aa21.66■■□□□ 1.06
UBE2D4-209ENST00000454428 DOCK2Q92608 1830 aa21.65■■□□□ 1.06
UBE2D4-209ENST00000454428 VCANP13611 3396 aa21.65■■□□□ 1.06
UBE2D4-209ENST00000454428 A0A0G2JLL6 359 aaPredicted RBP21.65■■□□□ 1.06
UBE2D4-209ENST00000454428 PHF20L1A8MW92 1017 aa21.65■■□□□ 1.06
UBE2D4-209ENST00000454428 PRRT2Q7Z6L0 340 aaPredicted RBP21.65■■□□□ 1.06
UBE2D4-209ENST00000454428 DEFB118Q96PH6 123 aa21.65■■□□□ 1.06
UBE2D4-209ENST00000454428 CRISPLD2Q9H0B8 497 aa21.65■■□□□ 1.06
UBE2D4-209ENST00000454428 PXYLP1Q8TE99 480 aa21.64■■□□□ 1.05
UBE2D4-209ENST00000454428 LAMA2P24043 3122 aaKnown RBP21.64■■□□□ 1.05
UBE2D4-209ENST00000454428 IRF5Q13568 498 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms