RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 MFSD6Q6ZSS7 791 aa11.46□□□□□ -0.57
RFC4-210ENST00000449502 SDR42E1Q8WUS8 393 aa11.46□□□□□ -0.57
RFC4-210ENST00000449502 CHMP4CQ96CF2 233 aa11.46□□□□□ -0.57
RFC4-210ENST00000449502 KRT23Q9C075 422 aa11.46□□□□□ -0.57
RFC4-210ENST00000449502 TAOK3Q9H2K8 898 aa11.46□□□□□ -0.57
RFC4-210ENST00000449502 CNNM2Q9H8M5 875 aa11.46□□□□□ -0.57
RFC4-210ENST00000449502 CWC22Q9HCG8 908 aaKnown RBP11.46□□□□□ -0.57
RFC4-210ENST00000449502 SH2B1Q9NRF2 756 aaPredicted RBP11.46□□□□□ -0.57
RFC4-210ENST00000449502 ZNF277Q9NRM2 450 aaPredicted RBP11.46□□□□□ -0.57
RFC4-210ENST00000449502 MCM5P33992 734 aa11.45□□□□□ -0.58
RFC4-210ENST00000449502 RBM5P52756 815 aaKnown RBP eCLIP11.45□□□□□ -0.58
RFC4-210ENST00000449502 PPP4CP60510 307 aa11.45□□□□□ -0.58
RFC4-210ENST00000449502 PPARAQ07869 468 aa11.45□□□□□ -0.58
RFC4-210ENST00000449502 Q6ZUG5 572 aa11.45□□□□□ -0.58
RFC4-210ENST00000449502 TEX11Q8IYF3 940 aa11.45□□□□□ -0.58
RFC4-210ENST00000449502 JDP2Q8WYK2 163 aa11.45□□□□□ -0.58
RFC4-210ENST00000449502 TEKT1Q969V4 418 aa11.45□□□□□ -0.58
RFC4-210ENST00000449502 FAM163AQ96GL9 167 aaPredicted RBP11.45□□□□□ -0.58
RFC4-210ENST00000449502 TTC14Q96N46 770 aa11.45□□□□□ -0.58
RFC4-210ENST00000449502 SGIP1Q9BQI5 828 aa11.45□□□□□ -0.58
RFC4-210ENST00000449502 ALDH8A1Q9H2A2 487 aaPredicted RBP11.45□□□□□ -0.58
RFC4-210ENST00000449502 CHMP5Q9NZZ3 219 aa11.45□□□□□ -0.58
RFC4-210ENST00000449502 ARPP21Q9UBL0 812 aaPredicted RBP11.45□□□□□ -0.58
RFC4-210ENST00000449502 NAP1L2Q9ULW6 460 aaPredicted RBP11.45□□□□□ -0.58
RFC4-210ENST00000449502 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.45□□□□□ -0.58
RFC4-210ENST00000449502 GPR75-ASB3A0A0A6YYF3 556 aa11.44□□□□□ -0.58
RFC4-210ENST00000449502 FOXP2O15409 715 aa11.44□□□□□ -0.58
RFC4-210ENST00000449502 POLR3DP05423 398 aaPredicted RBP11.44□□□□□ -0.58
RFC4-210ENST00000449502 IARSP41252 1262 aaKnown RBP11.44□□□□□ -0.58
RFC4-210ENST00000449502 PTGER2P43116 358 aa11.44□□□□□ -0.58
RFC4-210ENST00000449502 SART3Q15020 963 aaKnown RBP11.44□□□□□ -0.58
RFC4-210ENST00000449502 GRIK5Q16478 980 aa11.44□□□□□ -0.58
RFC4-210ENST00000449502 RRP12Q5JTH9 1297 aaKnown RBP11.44□□□□□ -0.58
RFC4-210ENST00000449502 AKNAD1Q5T1N1 836 aa11.44□□□□□ -0.58
RFC4-210ENST00000449502 STOX1Q6ZVD7 989 aa11.44□□□□□ -0.58
RFC4-210ENST00000449502 TCEANC2Q96MN5 208 aa11.44□□□□□ -0.58
RFC4-210ENST00000449502 EPB41L4AQ9HCS5 686 aaPredicted RBP11.44□□□□□ -0.58
RFC4-210ENST00000449502 HDAC9Q9UKV0 1011 aa11.44□□□□□ -0.58
RFC4-210ENST00000449502 TAF6LQ9Y6J9 622 aa11.44□□□□□ -0.58
RFC4-210ENST00000449502 MYO3BQ8WXR4 1341 aa11.43□□□□□ -0.58
RFC4-210ENST00000449502 TAF1P21675 1872 aa11.43□□□□□ -0.58
RFC4-210ENST00000449502 ANKRD31Q8N7Z5 1873 aa11.43□□□□□ -0.58
RFC4-210ENST00000449502 DUOX1Q9NRD9 1551 aa11.43□□□□□ -0.58
RFC4-210ENST00000449502 ERICH2A1L162 156 aa11.43□□□□□ -0.58
RFC4-210ENST00000449502 PRC1O43663 620 aa11.43□□□□□ -0.58
RFC4-210ENST00000449502 PCP11498 1178 aaKnown RBP11.43□□□□□ -0.58
RFC4-210ENST00000449502 CTDSPL2Q05D32 466 aa11.43□□□□□ -0.58
RFC4-210ENST00000449502 DACT2Q5SW24 774 aa11.43□□□□□ -0.58
RFC4-210ENST00000449502 STK11IPQ8N1F8 1099 aa11.43□□□□□ -0.58
RFC4-210ENST00000449502 SH3RF3Q8TEJ3 882 aaPredicted RBP11.43□□□□□ -0.58
RFC4-210ENST00000449502 ZNF384Q8TF68 577 aa11.43□□□□□ -0.58
RFC4-210ENST00000449502 INTS4Q96HW7 963 aaKnown RBP11.43□□□□□ -0.58
RFC4-210ENST00000449502 LARP6Q9BRS8 491 aaKnown RBP11.43□□□□□ -0.58
RFC4-210ENST00000449502 MXD3Q9BW11 206 aa11.43□□□□□ -0.58
RFC4-210ENST00000449502 DCP1AQ9NPI6 582 aaPredicted RBP11.43□□□□□ -0.58
RFC4-210ENST00000449502 MCM9Q9NXL9 1143 aa11.43□□□□□ -0.58
RFC4-210ENST00000449502 CIZ1Q9ULV3 898 aaPredicted RBP11.43□□□□□ -0.58
RFC4-210ENST00000449502 AK9Q5TCS8 1911 aa11.43□□□□□ -0.58
RFC4-210ENST00000449502 GAKO14976 1311 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 WDR19Q8NEZ3 1342 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 USP17L12C9JPN9 530 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 USP17L21D6R901 530 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 RAD17O75943 681 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 CRKP46108 304 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 SCNN1DP51172 638 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 HDLBPQ00341 1268 aaKnown RBP11.42□□□□□ -0.58
RFC4-210ENST00000449502 PDE4BQ07343 736 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 CUL4AQ13619 759 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 CTR9Q6PD62 1173 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 HHIPL2Q6UWX4 724 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 SYNE3Q6ZMZ3 975 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 NFXL1Q6ZNB6 911 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 TBC1D10CQ8IV04 446 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 KIAA0825Q8IV33 1275 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 CERS5Q8N5B7 392 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 TGFBRAP1Q8WUH2 860 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 STAG1Q8WVM7 1258 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 ESR2Q92731 530 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 BRF1Q92994 677 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 LRRC2Q9BYS8 371 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 ZNF287Q9HBT7 754 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 USP40Q9NVE5 1235 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 ANAPC4Q9UJX5 808 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 ZNRF3Q9ULT6 936 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 SMC3Q9UQE7 1217 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 DAGLAQ9Y4D2 1042 aa11.42□□□□□ -0.58
RFC4-210ENST00000449502 COL11A2P13942 1736 aaPredicted RBP11.41□□□□□ -0.58
RFC4-210ENST00000449502 B4E1Z4 1266 aa11.41□□□□□ -0.58
RFC4-210ENST00000449502 NUCB2P80303 420 aa11.41□□□□□ -0.58
RFC4-210ENST00000449502 EXOSC10Q01780 885 aaKnown RBP11.41□□□□□ -0.58
RFC4-210ENST00000449502 SBK1Q52WX2 424 aa11.41□□□□□ -0.58
RFC4-210ENST00000449502 RSBN1LQ6PCB5 846 aaPredicted RBP11.41□□□□□ -0.58
RFC4-210ENST00000449502 CHST3Q7LGC8 479 aa11.41□□□□□ -0.58
RFC4-210ENST00000449502 MAPKAPK5Q8IW41 473 aa11.41□□□□□ -0.58
RFC4-210ENST00000449502 MB21D2Q8IYB1 491 aaPredicted RBP11.41□□□□□ -0.58
RFC4-210ENST00000449502 OGFOD1Q8N543 542 aa11.41□□□□□ -0.58
RFC4-210ENST00000449502 TMEM87BQ96K49 555 aa11.41□□□□□ -0.58
RFC4-210ENST00000449502 UBAC1Q9BSL1 405 aa11.41□□□□□ -0.58
RFC4-210ENST00000449502 MRIQ9BWK5 157 aa11.41□□□□□ -0.58
RFC4-210ENST00000449502 TPCN1Q9ULQ1 816 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms