RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TM4SF4P48230 202 aa17.31■□□□□ 0.36
RTFDC1-204ENST00000449062 TNNI2P48788 182 aa17.31■□□□□ 0.36
RTFDC1-204ENST00000449062 MECOMQ03112 1051 aa17.31■□□□□ 0.36
RTFDC1-204ENST00000449062 NFIAQ12857 509 aa17.31■□□□□ 0.36
RTFDC1-204ENST00000449062 SPRYD7Q5W111 196 aa17.31■□□□□ 0.36
RTFDC1-204ENST00000449062 REM2Q8IYK8 340 aaPredicted RBP17.31■□□□□ 0.36
RTFDC1-204ENST00000449062 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.31■□□□□ 0.36
RTFDC1-204ENST00000449062 FAM151AQ8WW52 585 aa17.31■□□□□ 0.36
RTFDC1-204ENST00000449062 SLC10A4Q96EP9 437 aa17.31■□□□□ 0.36
RTFDC1-204ENST00000449062 RNF186Q9NXI6 227 aa17.31■□□□□ 0.36
RTFDC1-204ENST00000449062 TLR7Q9NYK1 1049 aaKnown RBP17.31■□□□□ 0.36
RTFDC1-204ENST00000449062 FAM198AQ9UFP1 575 aa17.31■□□□□ 0.36
RTFDC1-204ENST00000449062 GPR75-ASB3A0A0A6YYF3 556 aa17.3■□□□□ 0.36
RTFDC1-204ENST00000449062 IFFO2Q5TF58 517 aa17.3■□□□□ 0.36
RTFDC1-204ENST00000449062 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.3■□□□□ 0.36
RTFDC1-204ENST00000449062 ZFPM1Q8IX07 1006 aa17.3■□□□□ 0.36
RTFDC1-204ENST00000449062 RHPN1Q8TCX5 695 aa17.3■□□□□ 0.36
RTFDC1-204ENST00000449062 NSUN4Q96CB9 384 aaKnown RBP17.3■□□□□ 0.36
RTFDC1-204ENST00000449062 IDI2Q9BXS1 227 aa17.3■□□□□ 0.36
RTFDC1-204ENST00000449062 CCDC8Q9H0W5 538 aaPredicted RBP17.3■□□□□ 0.36
RTFDC1-204ENST00000449062 CHMP4BQ9H444 224 aaKnown RBP17.3■□□□□ 0.36
RTFDC1-204ENST00000449062 SNRKQ9NRH2 765 aa17.3■□□□□ 0.36
RTFDC1-204ENST00000449062 USP40Q9NVE5 1235 aa17.3■□□□□ 0.36
RTFDC1-204ENST00000449062 TSKSQ9UJT2 592 aa17.3■□□□□ 0.36
RTFDC1-204ENST00000449062 IREB2P48200 963 aaKnown RBP17.29■□□□□ 0.36
RTFDC1-204ENST00000449062 HSP90AB4PQ58FF6 505 aa17.29■□□□□ 0.36
RTFDC1-204ENST00000449062 CCDC158Q5M9N0 1113 aa17.29■□□□□ 0.36
RTFDC1-204ENST00000449062 ERICH6Q7L0X2 663 aa17.29■□□□□ 0.36
RTFDC1-204ENST00000449062 ERC1Q8IUD2 1116 aa17.29■□□□□ 0.36
RTFDC1-204ENST00000449062 SAGE1Q9NXZ1 904 aa17.29■□□□□ 0.36
RTFDC1-204ENST00000449062 TMOD2Q9NZR1 351 aa17.29■□□□□ 0.36
RTFDC1-204ENST00000449062 CYP2E1P05181 493 aaPredicted RBP17.28■□□□□ 0.36
RTFDC1-204ENST00000449062 GJA5P36382 358 aa17.28■□□□□ 0.36
RTFDC1-204ENST00000449062 RHBDL3P58872 404 aa17.28■□□□□ 0.36
RTFDC1-204ENST00000449062 ANKRD13AQ8IZ07 590 aa17.28■□□□□ 0.36
RTFDC1-204ENST00000449062 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.28■□□□□ 0.364e-6■■■□□ 15.5
RTFDC1-204ENST00000449062 HMMRO75330 724 aa17.27■□□□□ 0.36
RTFDC1-204ENST00000449062 WDHD1O75717 1129 aaPredicted RBP17.27■□□□□ 0.36
RTFDC1-204ENST00000449062 TRPA1O75762 1119 aa17.27■□□□□ 0.36
RTFDC1-204ENST00000449062 MAP3K9P80192 1104 aa17.27■□□□□ 0.36
RTFDC1-204ENST00000449062 TTC39AQ5SRH9 613 aa17.27■□□□□ 0.36
RTFDC1-204ENST00000449062 SLF2Q8IX21 1173 aa17.27■□□□□ 0.36
RTFDC1-204ENST00000449062 WNK4Q96J92 1243 aa17.27■□□□□ 0.36
RTFDC1-204ENST00000449062 MYH13Q9UKX3 1938 aa17.27■□□□□ 0.35
RTFDC1-204ENST00000449062 RFX7Q2KHR2 1363 aa17.27■□□□□ 0.35
RTFDC1-204ENST00000449062 RPAP1Q9BWH6 1393 aaPredicted RBP17.27■□□□□ 0.35
RTFDC1-204ENST00000449062 MROH7-TTC4A0A0A0MT08 1334 aa17.26■□□□□ 0.35
RTFDC1-204ENST00000449062 ZBTB48P10074 688 aaPredicted RBP17.26■□□□□ 0.35
RTFDC1-204ENST00000449062 ZAP70P43403 619 aa17.26■□□□□ 0.35
RTFDC1-204ENST00000449062 MAP3K10Q02779 954 aa17.26■□□□□ 0.35
RTFDC1-204ENST00000449062 SH3BP5LQ7L8J4 393 aa17.26■□□□□ 0.35
RTFDC1-204ENST00000449062 DZIP1Q86YF9 867 aaKnown RBP17.26■□□□□ 0.35
RTFDC1-204ENST00000449062 TNS4Q8IZW8 715 aa17.26■□□□□ 0.35
RTFDC1-204ENST00000449062 IL1RAPL2Q9NP60 686 aa17.26■□□□□ 0.35
RTFDC1-204ENST00000449062 ZNF112Q9UJU3 913 aa17.26■□□□□ 0.35
RTFDC1-204ENST00000449062 AKAP11Q9UKA4 1901 aa17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 IGSF3O75054 1194 aa17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 RAB11FIP3O75154 756 aa17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 ENTPD3O75355 529 aa17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 LDHCP07864 332 aa17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 BTDP43251 543 aa17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 RGS3P49796 1198 aa17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 TCP10Q12799 353 aa17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 MKRN3Q13064 507 aaKnown RBP17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 AACSQ86V21 672 aa17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 KIF1BPQ96EK5 621 aa17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 DDX4Q9NQI0 724 aaKnown RBP17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 PIH1D3Q9NQM4 214 aaKnown RBP17.25■□□□□ 0.35
RTFDC1-204ENST00000449062 TESPA1A2RU30 521 aaPredicted RBP17.24■□□□□ 0.35
RTFDC1-204ENST00000449062 MAP4K4O95819 1239 aaPredicted RBP17.24■□□□□ 0.35
RTFDC1-204ENST00000449062 INHBEP58166 350 aa17.24■□□□□ 0.35
RTFDC1-204ENST00000449062 PPP4CP60510 307 aa17.24■□□□□ 0.35
RTFDC1-204ENST00000449062 GSTO1P78417 241 aa17.24■□□□□ 0.35
RTFDC1-204ENST00000449062 VGLL4Q14135 290 aa17.24■□□□□ 0.35
RTFDC1-204ENST00000449062 MIGA2Q7L4E1 593 aa17.24■□□□□ 0.35
RTFDC1-204ENST00000449062 MS4A4AQ96JQ5 239 aa17.24■□□□□ 0.35
RTFDC1-204ENST00000449062 RAI14Q9P0K7 980 aa17.24■□□□□ 0.35
RTFDC1-204ENST00000449062 LRP2BPQ9P2M1 347 aa17.24■□□□□ 0.35
RTFDC1-204ENST00000449062 ATRNL1Q5VV63 1379 aa17.24■□□□□ 0.35
RTFDC1-204ENST00000449062 CNKSR2Q8WXI2 1034 aa17.23■□□□□ 0.35
RTFDC1-204ENST00000449062 HOOK2Q96ED9 719 aa17.23■□□□□ 0.35
RTFDC1-204ENST00000449062 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
RTFDC1-204ENST00000449062 CFHR5Q9BXR6 569 aa17.23■□□□□ 0.35
RTFDC1-204ENST00000449062 ELP3Q9H9T3 547 aa17.23■□□□□ 0.35
RTFDC1-204ENST00000449062 MYH2Q9UKX2 1941 aa17.22■□□□□ 0.35
RTFDC1-204ENST00000449062 DDTLA6NHG4 134 aaPredicted RBP17.22■□□□□ 0.35
RTFDC1-204ENST00000449062 MANSC4A6NHS7 340 aaPredicted RBP17.22■□□□□ 0.35
RTFDC1-204ENST00000449062 PHF20L1A8MW92 1017 aa17.22■□□□□ 0.35
RTFDC1-204ENST00000449062 RRP1P56182 461 aaKnown RBP17.22■□□□□ 0.35
RTFDC1-204ENST00000449062 ADGRA1Q86SQ6 560 aa17.22■□□□□ 0.35
RTFDC1-204ENST00000449062 ZKSCAN4Q969J2 545 aaPredicted RBP17.22■□□□□ 0.35
RTFDC1-204ENST00000449062 PTPN18Q99952 460 aa17.22■□□□□ 0.35
RTFDC1-204ENST00000449062 R3HDMLQ9H3Y0 253 aa17.22■□□□□ 0.35
RTFDC1-204ENST00000449062 ANTXR1Q9H6X2 564 aa17.22■□□□□ 0.35
RTFDC1-204ENST00000449062 DCTPP1Q9H773 170 aa17.22■□□□□ 0.35
RTFDC1-204ENST00000449062 PCDHB15Q9Y5E8 787 aa17.22■□□□□ 0.35
RTFDC1-204ENST00000449062 SNCAIPQ9Y6H5 919 aa17.22■□□□□ 0.35
RTFDC1-204ENST00000449062 APBB1O00213 710 aa17.21■□□□□ 0.35
RTFDC1-204ENST00000449062 IGF2BP3O00425 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms