RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 TSC1Q92574 1164 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 KCNF1Q9H3M0 494 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 RCOR1Q9UKL0 485 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 MYH3P11055 1940 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 ABCC12Q96J65 1359 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 IFIT3O14879 490 aaKnown RBP17.28■□□□□ 0.36
SF1-211ENST00000448404 UQCRFS1P1P0C7P4 283 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 NDUFA8P51970 172 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 LRMPQ12912 555 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 IGDCC4Q8TDY8 1250 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 GPR101Q96P66 508 aaPredicted RBP17.28■□□□□ 0.36
SF1-211ENST00000448404 BCL2L12Q9HB09 334 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 PYCARDQ9ULZ3 195 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 SPEF2Q9C093 1822 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 ZNF165P49910 485 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 SPECC1Q5M775 1068 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 ZSCAN25Q6NSZ9 544 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 SASS6Q6UVJ0 657 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 ALG1Q9BT22 464 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 LY9Q9HBG7 655 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 FAM217BQ9NTX9 383 aaPredicted RBP17.28■□□□□ 0.36
SF1-211ENST00000448404 OFD1O75665 1012 aa17.27■□□□□ 0.36
SF1-211ENST00000448404 PTGS1P23219 599 aa17.27■□□□□ 0.36
SF1-211ENST00000448404 BCL11BQ9C0K0 894 aaPredicted RBP17.27■□□□□ 0.36
SF1-211ENST00000448404 DDX19AQ9NUU7 478 aaKnown RBP17.27■□□□□ 0.36
SF1-211ENST00000448404 PODXL2Q9NZ53 605 aa17.27■□□□□ 0.36
SF1-211ENST00000448404 ATP2B1P20020 1258 aa17.27■□□□□ 0.35
SF1-211ENST00000448404 EVCP57679 992 aa17.27■□□□□ 0.35
SF1-211ENST00000448404 STK38Q15208 465 aa17.27■□□□□ 0.35
SF1-211ENST00000448404 SF3A1Q15459 793 aaKnown RBP17.27■□□□□ 0.35
SF1-211ENST00000448404 TXNRD3Q86VQ6 643 aa17.27■□□□□ 0.35
SF1-211ENST00000448404 ZNF384Q8TF68 577 aa17.27■□□□□ 0.35
SF1-211ENST00000448404 NUP133Q8WUM0 1156 aa17.27■□□□□ 0.35
SF1-211ENST00000448404 SLC26A6Q9BXS9 759 aa17.27■□□□□ 0.35
SF1-211ENST00000448404 KCNJ14Q9UNX9 436 aa17.27■□□□□ 0.35
SF1-211ENST00000448404 GNPATO15228 680 aa17.26■□□□□ 0.35
SF1-211ENST00000448404 CHAF1AQ13111 956 aaPredicted RBP17.26■□□□□ 0.35
SF1-211ENST00000448404 GOLGA8AA7E2F4 631 aa17.26■□□□□ 0.35
SF1-211ENST00000448404 PATL2C9JE40 543 aaKnown RBP17.26■□□□□ 0.35
SF1-211ENST00000448404 ARID5BQ14865 1188 aa17.26■□□□□ 0.35
SF1-211ENST00000448404 UVSSAQ2YD98 709 aa17.26■□□□□ 0.35
SF1-211ENST00000448404 CLIC6Q96NY7 704 aa17.26■□□□□ 0.35
SF1-211ENST00000448404 ARID3AQ99856 593 aa17.26■□□□□ 0.35
SF1-211ENST00000448404 PLCH1Q4KWH8 1693 aa17.26■□□□□ 0.35
SF1-211ENST00000448404 HS1BP3Q53T59 392 aa17.25■□□□□ 0.35
SF1-211ENST00000448404 MYSM1Q5VVJ2 828 aa17.25■□□□□ 0.35
SF1-211ENST00000448404 ZNF512BQ96KM6 892 aaPredicted RBP17.25■□□□□ 0.35
SF1-211ENST00000448404 COL1A1P02452 1464 aaPredicted RBP17.25■□□□□ 0.35
SF1-211ENST00000448404 BAZ2BQ9UIF8 2168 aaKnown RBP17.25■□□□□ 0.35
SF1-211ENST00000448404 ZBTB43O43298 467 aa17.25■□□□□ 0.35
SF1-211ENST00000448404 ZNF500O60304 480 aaPredicted RBP17.25■□□□□ 0.35
SF1-211ENST00000448404 WDHD1O75717 1129 aaPredicted RBP17.25■□□□□ 0.35
SF1-211ENST00000448404 KIF23Q02241 960 aaPredicted RBP17.25■□□□□ 0.35
SF1-211ENST00000448404 DNTTIP2Q5QJE6 756 aaKnown RBP17.25■□□□□ 0.35
SF1-211ENST00000448404 KRT40Q6A162 431 aa17.25■□□□□ 0.35
SF1-211ENST00000448404 CCDC73Q6ZRK6 1079 aa17.25■□□□□ 0.35
SF1-211ENST00000448404 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
SF1-211ENST00000448404 DRC7Q8IY82 874 aa17.25■□□□□ 0.35
SF1-211ENST00000448404 LINC00301Q8NCQ3 95 aa17.25■□□□□ 0.35
SF1-211ENST00000448404 PIBF1Q8WXW3 757 aa17.25■□□□□ 0.35
SF1-211ENST00000448404 TRIM5Q9C035 493 aa17.25■□□□□ 0.35
SF1-211ENST00000448404 MINPP1Q9UNW1 487 aa17.25■□□□□ 0.35
SF1-211ENST00000448404 ANKRD36CQ5JPF3 1778 aa17.25■□□□□ 0.35
SF1-211ENST00000448404 PARP10Q53GL7 1025 aa17.24■□□□□ 0.35
SF1-211ENST00000448404 ANKRD18AQ8IVF6 992 aa17.24■□□□□ 0.35
SF1-211ENST00000448404 PTPN21Q16825 1174 aa17.24■□□□□ 0.35
SF1-211ENST00000448404 ENGASEQ8NFI3 743 aa17.24■□□□□ 0.35
SF1-211ENST00000448404 MROH7-TTC4A0A0A0MT08 1334 aa17.24■□□□□ 0.35
SF1-211ENST00000448404 MYH7P12883 1935 aa17.24■□□□□ 0.35
SF1-211ENST00000448404 UBAP1LF5GYI3 381 aa17.23■□□□□ 0.35
SF1-211ENST00000448404 KINO60870 393 aaKnown RBP17.23■□□□□ 0.35
SF1-211ENST00000448404 MFSD6Q6ZSS7 791 aa17.23■□□□□ 0.35
SF1-211ENST00000448404 ZNF396Q96N95 335 aaPredicted RBP17.23■□□□□ 0.35
SF1-211ENST00000448404 SDF4Q9BRK5 362 aa17.23■□□□□ 0.35
SF1-211ENST00000448404 KIF3AQ9Y496 699 aa17.23■□□□□ 0.35
SF1-211ENST00000448404 SLC12A7Q9Y666 1083 aa17.23■□□□□ 0.35
SF1-211ENST00000448404 NMT2O60551 498 aa17.23■□□□□ 0.35
SF1-211ENST00000448404 NTRK3Q16288 839 aa17.23■□□□□ 0.35
SF1-211ENST00000448404 AKNAD1Q5T1N1 836 aa17.23■□□□□ 0.35
SF1-211ENST00000448404 CCDC186Q7Z3E2 898 aa17.23■□□□□ 0.35
SF1-211ENST00000448404 FAM84BQ96KN1 310 aaPredicted RBP17.23■□□□□ 0.35
SF1-211ENST00000448404 FAM13BQ9NYF5 915 aa17.23■□□□□ 0.35
SF1-211ENST00000448404 THRAP3Q9Y2W1 955 aaKnown RBP17.23■□□□□ 0.35
SF1-211ENST00000448404 ZMYM6O95789 1325 aa17.23■□□□□ 0.35
SF1-211ENST00000448404 NPHP1O15259 732 aa17.22■□□□□ 0.35
SF1-211ENST00000448404 GNL2Q13823 731 aaKnown RBP17.22■□□□□ 0.35
SF1-211ENST00000448404 CDCA7Q9BWT1 371 aaPredicted RBP17.22■□□□□ 0.35
SF1-211ENST00000448404 SPTLC2O15270 562 aa17.22■□□□□ 0.35
SF1-211ENST00000448404 PRDX5P30044 214 aa17.22■□□□□ 0.35
SF1-211ENST00000448404 GRIN1Q05586 938 aa17.22■□□□□ 0.35
SF1-211ENST00000448404 KIAA2012Q0VF49 1180 aa17.22■□□□□ 0.35
SF1-211ENST00000448404 RBM43Q6ZSC3 357 aaKnown RBP17.22■□□□□ 0.35
SF1-211ENST00000448404 PHLPP1O60346 1717 aa17.21■□□□□ 0.35
SF1-211ENST00000448404 CCDC69A6NI79 296 aa17.21■□□□□ 0.35
SF1-211ENST00000448404 BTBD18B2RXH4 712 aa17.21■□□□□ 0.35
SF1-211ENST00000448404 IARSP41252 1262 aaKnown RBP17.21■□□□□ 0.35
SF1-211ENST00000448404 FAM160A1Q05DH4 1040 aa17.21■□□□□ 0.35
SF1-211ENST00000448404 NR5A1Q13285 461 aa17.21■□□□□ 0.35
SF1-211ENST00000448404 CCDC144BQ3MJ40 725 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms