RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 VPS37DQ86XT2 251 aa17.68■□□□□ 0.42
SHANK2-209ENST00000445654 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.68■□□□□ 0.42
SHANK2-209ENST00000445654 STAP2Q9UGK3 403 aa17.68■□□□□ 0.42
SHANK2-209ENST00000445654 ADCY3O60266 1144 aa17.67■□□□□ 0.42
SHANK2-209ENST00000445654 ECM2O94769 699 aaPredicted RBP17.67■□□□□ 0.42
SHANK2-209ENST00000445654 FOXO4P98177 505 aa17.67■□□□□ 0.42
SHANK2-209ENST00000445654 TWISTNBQ3B726 338 aaPredicted RBP17.67■□□□□ 0.42
SHANK2-209ENST00000445654 NECAB2Q7Z6G3 386 aa17.67■□□□□ 0.42
SHANK2-209ENST00000445654 DEFB123Q8N688 67 aa17.67■□□□□ 0.42
SHANK2-209ENST00000445654 TSPYL6Q8N831 410 aa17.67■□□□□ 0.42
SHANK2-209ENST00000445654 ZDHHC15Q96MV8 337 aa17.67■□□□□ 0.42
SHANK2-209ENST00000445654 UNC93B1Q9H1C4 597 aa17.67■□□□□ 0.42
SHANK2-209ENST00000445654 SUGT1Q9Y2Z0 365 aa17.67■□□□□ 0.42
SHANK2-209ENST00000445654 CUL9Q8IWT3 2517 aa17.66■□□□□ 0.42
SHANK2-209ENST00000445654 FRAT2O75474 233 aaPredicted RBP17.66■□□□□ 0.42
SHANK2-209ENST00000445654 LMBR1LQ6UX01 489 aa17.66■□□□□ 0.42
SHANK2-209ENST00000445654 ANKLE1Q8NAG6 615 aa17.66■□□□□ 0.42
SHANK2-209ENST00000445654 FAM84BQ96KN1 310 aaPredicted RBP17.66■□□□□ 0.42
SHANK2-209ENST00000445654 MGAMO43451 1857 aa17.66■□□□□ 0.42
SHANK2-209ENST00000445654 CACNA1FO60840 1977 aa17.66■□□□□ 0.42
SHANK2-209ENST00000445654 CXCL11O14625 94 aa17.65■□□□□ 0.42
SHANK2-209ENST00000445654 BCRP11274 1271 aa17.65■□□□□ 0.42
SHANK2-209ENST00000445654 GYG1P46976 350 aa17.65■□□□□ 0.42
SHANK2-209ENST00000445654 IRF5Q13568 498 aa17.65■□□□□ 0.42
SHANK2-209ENST00000445654 LRIT3Q3SXY7 679 aa17.65■□□□□ 0.42
SHANK2-209ENST00000445654 CAVIN4Q5BKX8 364 aa17.65■□□□□ 0.42
SHANK2-209ENST00000445654 G2E3Q7L622 706 aa17.65■□□□□ 0.42
SHANK2-209ENST00000445654 GDF15Q99988 308 aa17.65■□□□□ 0.42
SHANK2-209ENST00000445654 FASTKD5Q7L8L6 764 aaKnown RBP17.64■□□□□ 0.41
SHANK2-209ENST00000445654 DEFB118Q96PH6 123 aa17.64■□□□□ 0.41
SHANK2-209ENST00000445654 INHAP05111 366 aa17.63■□□□□ 0.41
SHANK2-209ENST00000445654 CACNB3P54284 484 aa17.63■□□□□ 0.41
SHANK2-209ENST00000445654 NOL9Q5SY16 702 aaKnown RBP17.63■□□□□ 0.41
SHANK2-209ENST00000445654 FAM151AQ8WW52 585 aa17.63■□□□□ 0.41
SHANK2-209ENST00000445654 CRISPLD2Q9H0B8 497 aa17.63■□□□□ 0.41
SHANK2-209ENST00000445654 PAK6Q9NQU5 681 aaPredicted RBP17.63■□□□□ 0.41
SHANK2-209ENST00000445654 ZNF112Q9UJU3 913 aa17.63■□□□□ 0.41
SHANK2-209ENST00000445654 MROH5Q6ZUA9 1318 aa17.63■□□□□ 0.41
SHANK2-209ENST00000445654 INPP5BP32019 993 aa17.62■□□□□ 0.41
SHANK2-209ENST00000445654 FLT3LGP49771 235 aa17.62■□□□□ 0.41
SHANK2-209ENST00000445654 CHAF1AQ13111 956 aaPredicted RBP17.62■□□□□ 0.41
SHANK2-209ENST00000445654 HHIPL2Q6UWX4 724 aa17.62■□□□□ 0.41
SHANK2-209ENST00000445654 SLC45A1Q9Y2W3 748 aa17.62■□□□□ 0.41
SHANK2-209ENST00000445654 TNPO2O14787 897 aaKnown RBP17.61■□□□□ 0.41
SHANK2-209ENST00000445654 FBXO33Q7Z6M2 555 aa17.61■□□□□ 0.41
SHANK2-209ENST00000445654 COA7Q96BR5 231 aa17.61■□□□□ 0.41
SHANK2-209ENST00000445654 PAWRQ96IZ0 340 aaKnown RBP17.61■□□□□ 0.41
SHANK2-209ENST00000445654 ZNF594Q96JF6 807 aaPredicted RBP17.61■□□□□ 0.41
SHANK2-209ENST00000445654 GABRQQ9UN88 632 aa17.61■□□□□ 0.41
SHANK2-209ENST00000445654 MOGSQ13724 837 aa17.6■□□□□ 0.41
SHANK2-209ENST00000445654 APOBEC3HQ6NTF7 200 aaKnown RBP17.6■□□□□ 0.41
SHANK2-209ENST00000445654 MIGA2Q7L4E1 593 aa17.6■□□□□ 0.41
SHANK2-209ENST00000445654 TDHQ8IZJ6 230 aa17.6■□□□□ 0.41
SHANK2-209ENST00000445654 MTMR10Q9NXD2 777 aa17.6■□□□□ 0.41
SHANK2-209ENST00000445654 GRM8O00222 908 aa17.59■□□□□ 0.41
SHANK2-209ENST00000445654 ELNP15502 786 aa17.59■□□□□ 0.41
SHANK2-209ENST00000445654 C7orf61Q8IZ16 206 aa17.59■□□□□ 0.41
SHANK2-209ENST00000445654 TSR2Q969E8 191 aaKnown RBP17.59■□□□□ 0.41
SHANK2-209ENST00000445654 CYP2C8P10632 490 aa17.58■□□□□ 0.4
SHANK2-209ENST00000445654 BCAMP50895 628 aa17.58■□□□□ 0.4
SHANK2-209ENST00000445654 GPAT2Q6NUI2 795 aa17.58■□□□□ 0.4
SHANK2-209ENST00000445654 SMCR8Q8TEV9 937 aaPredicted RBP17.58■□□□□ 0.4
SHANK2-209ENST00000445654 COL25A1Q9BXS0 654 aaPredicted RBP17.58■□□□□ 0.4
SHANK2-209ENST00000445654 NBPF3Q9H094 633 aa17.58■□□□□ 0.4
SHANK2-209ENST00000445654 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.58■□□□□ 0.43e-6■■■■□ 22.6
SHANK2-209ENST00000445654 PICK1Q9NRD5 415 aa17.58■□□□□ 0.4
SHANK2-209ENST00000445654 C9orf78Q9NZ63 289 aaPredicted RBP17.58■□□□□ 0.4
SHANK2-209ENST00000445654 KIF16BQ96L93 1317 aa17.57■□□□□ 0.4
SHANK2-209ENST00000445654 A0A0G2JLL6 359 aaPredicted RBP17.57■□□□□ 0.4
SHANK2-209ENST00000445654 GRIK5Q16478 980 aa17.57■□□□□ 0.4
SHANK2-209ENST00000445654 CCDC27Q2M243 656 aa17.57■□□□□ 0.4
SHANK2-209ENST00000445654 BEND3Q5T5X7 828 aa17.57■□□□□ 0.4
SHANK2-209ENST00000445654 PRRT2Q7Z6L0 340 aaPredicted RBP17.57■□□□□ 0.4
SHANK2-209ENST00000445654 AK9Q5TCS8 1911 aa17.57■□□□□ 0.4
SHANK2-209ENST00000445654 IL16Q14005 1332 aa17.56■□□□□ 0.4
SHANK2-209ENST00000445654 GADL1Q6ZQY3 521 aa17.56■□□□□ 0.4
SHANK2-209ENST00000445654 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.56■□□□□ 0.4
SHANK2-209ENST00000445654 WDR66Q8TBY9 1149 aa17.56■□□□□ 0.4
SHANK2-209ENST00000445654 UBE2OQ9C0C9 1292 aaKnown RBP17.56■□□□□ 0.4
SHANK2-209ENST00000445654 PNMA3Q9UL41 463 aa17.56■□□□□ 0.4
SHANK2-209ENST00000445654 TAOK2Q9UL54 1235 aa17.56■□□□□ 0.4
SHANK2-209ENST00000445654 ZMYND8Q9ULU4 1186 aaPredicted RBP17.56■□□□□ 0.4
SHANK2-209ENST00000445654 IQSEC3Q9UPP2 1182 aaPredicted RBP17.56■□□□□ 0.4
SHANK2-209ENST00000445654 ALPK3Q96L96 1907 aa17.56■□□□□ 0.4
SHANK2-209ENST00000445654 LAMA3Q16787 3333 aa17.55■□□□□ 0.4
SHANK2-209ENST00000445654 ALDH1L1O75891 902 aa17.55■□□□□ 0.4
SHANK2-209ENST00000445654 ZEB1P37275 1124 aaPredicted RBP17.55■□□□□ 0.4
SHANK2-209ENST00000445654 EPHA10Q5JZY3 1008 aa17.55■□□□□ 0.4
SHANK2-209ENST00000445654 Q7L0L9 218 aa17.55■□□□□ 0.4
SHANK2-209ENST00000445654 SCYL3Q8IZE3 742 aa17.55■□□□□ 0.4
SHANK2-209ENST00000445654 HMX1Q9NP08 348 aaPredicted RBP17.55■□□□□ 0.4
SHANK2-209ENST00000445654 HMGCRP04035 888 aa17.54■□□□□ 0.4
SHANK2-209ENST00000445654 MAGEA10P43363 369 aaPredicted RBP17.54■□□□□ 0.4
SHANK2-209ENST00000445654 METTL24Q5JXM2 366 aa17.54■□□□□ 0.4
SHANK2-209ENST00000445654 C11orf49Q9H6J7 331 aa17.54■□□□□ 0.4
SHANK2-209ENST00000445654 ZHX2Q9Y6X8 837 aa17.54■□□□□ 0.4
SHANK2-209ENST00000445654 RPTORQ8N122 1335 aa17.53■□□□□ 0.4
SHANK2-209ENST00000445654 PDE8BO95263 885 aa17.53■□□□□ 0.4
SHANK2-209ENST00000445654 IFIT1P09914 478 aaKnown RBP17.53■□□□□ 0.4
SHANK2-209ENST00000445654 FAM110CQ1W6H9 321 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms